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PDB: 12929 件

7GG7
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Group deposition SARS-CoV-2 main protease in complex with inhibitors from the COVID Moonshot -- Crystal Structure of SARS-CoV-2 main protease in complex with CHO-MSK-00c5269a-2 (Mpro-x12177)
分子名称: 2-(1H-benzotriazol-1-yl)-N-[(3-chlorophenyl)methyl]-N-(4-methoxyphenyl)acetamide, 3C-like proteinase, DIMETHYL SULFOXIDE
著者Fearon, D, Aimon, A, Aschenbrenner, J.C, Balcomb, B.H, Bertram, F.K.R, Brandao-Neto, J, Dias, A, Douangamath, A, Dunnett, L, Godoy, A.S, Gorrie-Stone, T.J, Koekemoer, L, Krojer, T, Lithgo, R.M, Lukacik, P, Marples, P.G, Mikolajek, H, Nelson, E, Owen, C.D, Powell, A.J, Rangel, V.L, Skyner, R, Strain-Damerell, C.M, Thompson, W, Tomlinson, C.W.E, Wild, C, Walsh, M.A, von Delft, F.
登録日2023-08-11
公開日2023-11-08
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.51 Å)
主引用文献Open science discovery of potent noncovalent SARS-CoV-2 main protease inhibitors.
Science, 382, 2023
7GGM
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Group deposition SARS-CoV-2 main protease in complex with inhibitors from the COVID Moonshot -- Crystal Structure of SARS-CoV-2 main protease in complex with MAT-POS-afd4d4fd-2 (Mpro-x12677)
分子名称: 2-(6-chloropyridin-2-yl)-N-(isoquinolin-4-yl)acetamide, 3C-like proteinase, DIMETHYL SULFOXIDE
著者Fearon, D, Aimon, A, Aschenbrenner, J.C, Balcomb, B.H, Bertram, F.K.R, Brandao-Neto, J, Dias, A, Douangamath, A, Dunnett, L, Godoy, A.S, Gorrie-Stone, T.J, Koekemoer, L, Krojer, T, Lithgo, R.M, Lukacik, P, Marples, P.G, Mikolajek, H, Nelson, E, Owen, C.D, Powell, A.J, Rangel, V.L, Skyner, R, Strain-Damerell, C.M, Thompson, W, Tomlinson, C.W.E, Wild, C, Walsh, M.A, von Delft, F.
登録日2023-08-11
公開日2023-11-08
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.839 Å)
主引用文献Open science discovery of potent noncovalent SARS-CoV-2 main protease inhibitors.
Science, 382, 2023
7GGO
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Group deposition SARS-CoV-2 main protease in complex with inhibitors from the COVID Moonshot -- Crystal Structure of SARS-CoV-2 main protease in complex with ALP-POS-8b8a49e1-4 (Mpro-x12682)
分子名称: (4R)-6-chloro-N-[(4R)-2-oxopiperidin-4-yl]-3,4-dihydro-2H-1-benzopyran-4-carboxamide, 3C-like proteinase, DIMETHYL SULFOXIDE
著者Fearon, D, Aimon, A, Aschenbrenner, J.C, Balcomb, B.H, Bertram, F.K.R, Brandao-Neto, J, Dias, A, Douangamath, A, Dunnett, L, Godoy, A.S, Gorrie-Stone, T.J, Koekemoer, L, Krojer, T, Lithgo, R.M, Lukacik, P, Marples, P.G, Mikolajek, H, Nelson, E, Owen, C.D, Powell, A.J, Rangel, V.L, Skyner, R, Strain-Damerell, C.M, Thompson, W, Tomlinson, C.W.E, Wild, C, Walsh, M.A, von Delft, F.
登録日2023-08-11
公開日2023-11-08
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.687 Å)
主引用文献Open science discovery of potent noncovalent SARS-CoV-2 main protease inhibitors.
Science, 382, 2023
4HCB
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The metal-free form of crystal structure of E.coli ExoI-ssDNA complex
分子名称: DNA (5'-D(*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3'), Exodeoxyribonuclease I, GLYCEROL, ...
著者Qiu, R, Wei, J, Lou, T, Liu, M, Ji, C, Gong, W.
登録日2012-09-29
公開日2013-10-09
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The structures of Escherichia coli exonuclease I in complex with the single strand DNA
To be published
4HCK
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HUMAN HCK SH3 DOMAIN, NMR, 25 STRUCTURES
分子名称: HEMATOPOIETIC CELL KINASE
著者Horita, D.A, Baldisseri, D.M, Zhang, W, Altieri, A.S, Smithgall, T.E, Gmeiner, W.H, Byrd, R.A.
登録日1998-03-09
公開日1998-06-17
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution structure of the human Hck SH3 domain and identification of its ligand binding site.
J.Mol.Biol., 278, 1998
4GR1
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THE BINDING OF THE RETRO-ANALOGUE OF GLUTATHIONE DISULFIDE TO GLUTATHIONE REDUCTASE
分子名称: 4N-MALONYL-CYSTEINYL-2,4-DIAMINOBUTYRATE DISULFIDE, FLAVIN-ADENINE DINUCLEOTIDE, GLUTATHIONE REDUCTASE, ...
著者Schulz, G.E, Janes, W.
登録日1990-03-26
公開日1991-10-15
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The binding of the retro-analogue of glutathione disulfide to glutathione reductase.
J.Biol.Chem., 265, 1990
4HMS
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Crystal structure of PhzG from Pseudomonas fluorescens 2-79 in complex with a second FMN in the substrate binding site
分子名称: FLAVIN MONONUCLEOTIDE, Phenazine biosynthesis protein phzG, SULFATE ION
著者Xu, N.N, Ahuja, E.G, Blankenfeldt, W.
登録日2012-10-18
公開日2013-08-07
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.33 Å)
主引用文献Trapped intermediates in crystals of the FMN-dependent oxidase PhzG provide insight into the final steps of phenazine biosynthesis
Acta Crystallogr.,Sect.D, 69, 2013
4HMD
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Crystal structure of cold-adapted chitinase from Moritella marina with a reaction intermediate - oxazolinium ion (NGO)
分子名称: 2-METHYL-4,5-DIHYDRO-(1,2-DIDEOXY-ALPHA-D-GLUCOPYRANOSO)[2,1-D]-1,3-OXAZOLE, 2-acetamido-2-deoxy-beta-D-glucopyranose, Chitinase 60, ...
著者Malecki, P.H, Vorgias, C.E, Raczynska, J.E, Rypniewski, W.
登録日2012-10-18
公開日2013-05-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Structure of a complete four-domain chitinase from Moritella marina, a marine psychrophilic bacterium
Acta Crystallogr.,Sect.D, 69, 2013
4HP3
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Crystal structure of Tet3 in complex with a CpG dsDNA
分子名称: DNA (5'-D(*GP*CP*CP*AP*AP*CP*GP*TP*TP*GP*GP*C)-3'), LOC100036628 protein, UNKNOWN ATOM OR ION, ...
著者Chao, X, Tempel, W, Bian, C, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2012-10-23
公開日2012-12-05
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Tet3 CXXC Domain and Dioxygenase Activity Cooperatively Regulate Key Genes for Xenopus Eye and Neural Development.
Cell(Cambridge,Mass.), 151, 2012
4HK4
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Crystal structure of apo Tyrosine-tRNA ligase mutant protein
分子名称: DI(HYDROXYETHYL)ETHER, Tyrosine--tRNA ligase
著者Yu, Y, Zhou, Q, Dong, J, Li, J, Xiaoxuan, L, Mukherjee, A, Ouyang, H, Nilges, M, Li, H, Gao, F, Gong, W, Lu, Y, Wang, J.
登録日2012-10-15
公開日2013-04-17
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.298 Å)
主引用文献Crystal structure of apo Tyrosine-tRNA ligase mutant protein
To be Published
4HIC
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Crystal structure of the potential transfer protein TraK from Gram-positive conjugative plasmid pIP501
分子名称: TraK
著者Goessweiner-Mohr, N, Keller, W.
登録日2012-10-11
公開日2014-01-22
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.001 Å)
主引用文献The type IV secretion protein TraK from the Enterococcus conjugative plasmid pIP501 exhibits a novel fold
Acta Crystallogr.,Sect.D, 70, 2014
1DG0
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NMR STRUCTURE OF DES[GLY1]-CONTRYPHAN-R CYCLIC PEPTIDE (MAJOR FORM)
分子名称: DES[GLY1]-CONTRYPHAN-R
著者Pallaghy, P.K, He, W, Jimenez, E.C, Olivera, B.M, Norton, R.S.
登録日1999-11-22
公開日2003-09-09
最終更新日2020-06-24
実験手法SOLUTION NMR
主引用文献Structures of the contryphan family of cyclic peptides. Role of electrostatic interactions in cis-trans isomerism
Biochemistry, 39, 2000
4HME
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Crystal structure of cold-adapted chitinase from Moritella marina with a reaction product - NAG2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chitinase 60, GLYCEROL, ...
著者Malecki, P.H, Vorgias, C.E, Raczynska, J.E, Rypniewski, W.
登録日2012-10-18
公開日2013-05-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Structure of a complete four-domain chitinase from Moritella marina, a marine psychrophilic bacterium
Acta Crystallogr.,Sect.D, 69, 2013
1DCH
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CRYSTAL STRUCTURE OF DCOH, A BIFUNCTIONAL, PROTEIN-BINDING TRANSCRIPTION COACTIVATOR
分子名称: DCOH (DIMERIZATION COFACTOR OF HNF-1), SULFATE ION
著者Endrizzi, J.A, Cronk, J.D, Wang, W, Crabtree, G.R, Alber, T.
登録日1995-01-24
公開日1996-03-08
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structure of DCoH, a bifunctional, protein-binding transcriptional coactivator.
Science, 268, 1995
1DFF
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PEPTIDE DEFORMYLASE
分子名称: PEPTIDE DEFORMYLASE, ZINC ION
著者Chan, M.K, Gong, W, Rajagopalan, P.T.R, Hao, B, Tsai, C.M, Pei, D.
登録日1997-08-19
公開日1998-09-02
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.88 Å)
主引用文献Crystal structure of the Escherichia coli peptide deformylase.
Biochemistry, 36, 1997
7ZEI
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Thermostable GH159 glycoside hydrolase from Caldicellulosiruptor at 1.7 A
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, ...
著者Baudrexl, M, Fida, T, Berk, B, Schwarz, W, Zverlov, V.V, Groll, M, Liebl, W.
登録日2022-03-31
公開日2022-08-03
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Biochemical and Structural Characterization of Thermostable GH159 Glycoside Hydrolases Exhibiting alpha-L-Arabinofuranosidase Activity.
Front Mol Biosci, 9, 2022
1DP3
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SOLUTION STRUCTURE OF THE DNA BINDING DOMAIN OF THE TRAM PROTEIN
分子名称: TRAM PROTEIN
著者Stockner, T, Plugariu, C, Koraimann, G, Hoegenauer, G, Bermel, W, Prytulla, S, Sterk, H.
登録日1999-12-23
公開日2001-04-04
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of the DNA-binding domain of TraM.
Biochemistry, 40, 2001
3NIL
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The structure of UBR box (RDAA)
分子名称: ACETATE ION, E3 ubiquitin-protein ligase UBR1, Peptide RDAA, ...
著者Choi, W.S, Jeong, B.-C, Lee, M.-R, Song, H.K.
登録日2010-06-16
公開日2010-09-15
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural basis for the recognition of N-end rule substrates by the UBR box of ubiquitin ligases
Nat.Struct.Mol.Biol., 17, 2010
3NIK
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The structure of UBR box (REAA)
分子名称: E3 ubiquitin-protein ligase UBR1, Peptide REAA, ZINC ION
著者Choi, W.S, Jeong, B.-C, Lee, M.-R, Song, H.K.
登録日2010-06-16
公開日2010-09-15
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural basis for the recognition of N-end rule substrates by the UBR box of ubiquitin ligases
Nat.Struct.Mol.Biol., 17, 2010
3NIS
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The structure of UBR box (native2)
分子名称: ACETATE ION, E3 ubiquitin-protein ligase UBR1, ZINC ION
著者Choi, W.S, Jeong, B.-C, Lee, M.-R, Song, H.K.
登録日2010-06-16
公開日2010-09-15
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献Structural basis for the recognition of N-end rule substrates by the UBR box of ubiquitin ligases
Nat.Struct.Mol.Biol., 17, 2010
1FP7
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MONOVALENT CATION BINDING SITES IN N10-FORMYLTETRAHYDROFOLATE SYNTHETASE FROM MOORELLA THERMOACETICA
分子名称: FORMATE--TETRAHYDROFOLATE LIGASE, POTASSIUM ION, SULFATE ION
著者Radfar, R, Leaphart, A, Brewer, J.M, Minor, W, Odom, J.D.
登録日2000-08-30
公開日2001-08-30
最終更新日2022-04-13
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Cation binding and thermostability of FTHFS monovalent cation binding sites and thermostability of N10-formyltetrahydrofolate synthetase from Moorella thermoacetica.
Biochemistry, 39, 2000
4GVL
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Crystal Structure of the GsuK RCK domain
分子名称: ADENOSINE MONOPHOSPHATE, CALCIUM ION, TrkA domain protein, ...
著者Kong, C, Zeng, W, Ye, S, Chen, L, Sauer, D.B, Lam, Y, Derebe, M.G, Jiang, Y.
登録日2012-08-30
公開日2012-12-26
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Distinct gating mechanisms revealed by the structures of a multi-ligand gated K(+) channel.
elife, 1, 2012
1FI9
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SOLUTION STRUCTURE OF THE IMIDAZOLE COMPLEX OF CYTOCHROME C
分子名称: CYTOCHROME C, HEME C, IMIDAZOLE
著者Banci, L, Bertini, I, Liu, G, Lu, J, Reddig, T, Tang, W, Wu, Y, Zhu, D.
登録日2000-08-03
公開日2000-08-23
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献Effects of extrinsic imidazole ligation on the molecular and electronic structure of cytochrome c
J.Biol.Inorg.Chem., 6, 2001
4H33
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Crystal structure of a voltage-gated K+ channel pore module in a closed state in lipid membranes, tetragonal crystal form
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Lmo2059 protein, POTASSIUM ION
著者Santos, J.S, Asmar-Rovira, G.A, Han, G.W, Liu, W, Syeda, R, Cherezov, V, Baker, K.A, Stevens, R.C, Montal, M.
登録日2012-09-13
公開日2012-11-07
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Crystal Structure of a Voltage-gated K+ Channel Pore Module in a Closed State in Lipid Membranes.
J.Biol.Chem., 287, 2012
1FO7
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HUMAN PRION PROTEIN MUTANT E200K FRAGMENT 90-231
分子名称: PRION PROTEIN
著者Zhang, Y, Swietnicki, W, Zagorski, M.G, Surewicz, W.K, Soennichsen, F.D.
登録日2000-08-25
公開日2000-09-21
最終更新日2018-03-14
実験手法SOLUTION NMR
主引用文献Solution structure of the E200K variant of human prion protein. Implications for the mechanism of pathogenesis in familial prion diseases.
J.Biol.Chem., 275, 2000

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