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PDB: 13052 results

4FVD
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Crystal structure of EV71 2A proteinase C110A mutant in complex with substrate
Descriptor: 10-mer peptide from 2A proteinase, 2A proteinase, ZINC ION
Authors:Cai, Q, Muhammad, Y, Liu, W, Gao, Z, Peng, X, Cai, Y, Wu, C, Zheng, Q, Li, J, Lin, T.
Deposit date:2012-06-29
Release date:2013-06-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Conformational Plasticity of 2A Proteinase from Enterovirus 71
J.Virol., 87, 2013
1FE1
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BU of 1fe1 by Molmil
CRYSTAL STRUCTURE PHOTOSYSTEM II
Descriptor: 2-[(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL)-AMINO]-2-METHYL-SUCCINIC ACID, CADMIUM ION, CHLOROPHYLL A, ...
Authors:Zouni, A, Witt, H.-T, Kern, J, Fromme, P, Krauss, N, Saenger, W, Orth, P.
Deposit date:2000-07-20
Release date:2001-02-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Crystal structure of photosystem II from Synechococcus elongatus at 3.8 A resolution.
Nature, 409, 2001
6B3X
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BU of 6b3x by Molmil
Crystal structure of CstF-50 in complex with CstF-77
Descriptor: Cleavage stimulation factor subunit 1, Cleavage stimulation factor subunit 3
Authors:Yang, W, Hsu, P, Yang, F, Song, J.E, Varani, G.
Deposit date:2017-09-25
Release date:2017-11-29
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Reconstitution of the CstF complex unveils a regulatory role for CstF-50 in recognition of 3'-end processing signals.
Nucleic Acids Res., 46, 2018
2MPK
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BU of 2mpk by Molmil
Characterization and structure of the MIT1 domain of a chitin synthase from the Oomycete Saprolegnia monoica
Descriptor: Chitin synthase 1
Authors:Bulone, V, Szpryngiel, S, Brown, C, Ye, W.
Deposit date:2014-05-27
Release date:2015-05-27
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural and functional characterization of the microtubule interacting and trafficking domains of two oomycete chitin synthases.
Febs J., 283, 2016
1R2W
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BU of 1r2w by Molmil
Coordinates of L11 with 58nts of 23S rRNA fitted into the cryo-EM map of the 70S ribosome
Descriptor: 50S ribosomal protein L11, 58nts of 23S rRNA
Authors:Valle, M, Zavialov, A, Li, W, Stagg, S.M, Sengupta, J, Nielsen, R.C, Nissen, P, Harvey, S.C, Ehrenberg, M, Frank, J.
Deposit date:2003-09-30
Release date:2003-11-04
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (9 Å)
Cite:Incorporation of aminoacyl-tRNA into the ribosome as seen by cryo-electron Microscopy
Nat.Struct.Biol., 10, 2003
1FPM
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BU of 1fpm by Molmil
MONOVALENT CATION BINDING SITES IN N10-FORMYLTETRAHYDROFOLATE SYNTHETASE FROM MOORELLA THERMOACETICA
Descriptor: CESIUM ION, FORMATE--TETRAHYDROFOLATE LIGASE, SULFATE ION
Authors:Radfar, R, Leaphart, A, Brewer, J.M, Minor, W, Odom, J.D.
Deposit date:2000-08-31
Release date:2001-08-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3 Å)
Cite:Cation binding and thermostability of FTHFS monovalent cation binding sites and thermostability of N10-formyltetrahydrofolate synthetase from Moorella thermoacetica.
Biochemistry, 39, 2000
1R34
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BU of 1r34 by Molmil
Golgi alpha-mannosidase II complex with 5-thio-D-mannopyranosylamidinium salt
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, N-[(1Z)-2-phenylethanimidoyl]-5-thio-alpha-D-mannopyranosylamine, ...
Authors:Kuntz, D.A, Xin, W, Kavelekar, L.M, Rose, D.R, Pinto, B.M.
Deposit date:2003-09-30
Release date:2004-11-02
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:5-Thio-d-glycopyranosylamines and their amidinium salts as potential transition-state mimics of glycosyl hydrolases: synthesis, enzyme inhibitory activities, X-ray crystallography, and molecular modeling
TETRAHEDRON ASYMMETRY, 16, 2005
5YP6
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BU of 5yp6 by Molmil
RORgamma (263-509) complexed with SRC2 and Compound 6
Descriptor: N-[3'-cyano-4'-(2-methylpropyl)-2-(trifluoromethyl)biphenyl-4-yl]-2-[4-(ethylsulfonyl)phenyl]acetamide, Nuclear receptor ROR-gamma, SRC2
Authors:Gao, M, Cai, W.
Deposit date:2017-11-01
Release date:2018-02-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:From ROR gamma t Agonist to Two Types of ROR gamma t Inverse Agonists
ACS Med Chem Lett, 9, 2018
5YPI
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BU of 5ypi by Molmil
Crystal structure of NDM-1 bound to hydrolyzed imipenem representing an EI1 complex
Descriptor: (2R)-2-[(2S,3R)-1,3-bis(oxidanyl)-1-oxidanylidene-butan-2-yl]-4-(2-methanimidamidoethylsulfanyl)-2,3-dihydro-1H-pyrrole -5-carboxylic acid, CHLORIDE ION, GLYCEROL, ...
Authors:Feng, H, Wang, D, Liu, W.
Deposit date:2017-11-01
Release date:2018-02-21
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The mechanism of NDM-1-catalyzed carbapenem hydrolysis is distinct from that of penicillin or cephalosporin hydrolysis.
Nat Commun, 8, 2017
1FKC
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BU of 1fkc by Molmil
HUMAN PRION PROTEIN (MUTANT E200K) FRAGMENT 90-231
Descriptor: PRION PROTEIN
Authors:Zhang, Y, Swietnicki, W, Zagorski, M.G, Surewicz, W.K, Soennichsen, F.D.
Deposit date:2000-08-09
Release date:2000-09-21
Last modified:2018-03-14
Method:SOLUTION NMR
Cite:Solution structure of the E200K variant of human prion protein. Implications for the mechanism of pathogenesis in familial prion diseases.
J.Biol.Chem., 275, 2000
1FQJ
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BU of 1fqj by Molmil
CRYSTAL STRUCTURE OF THE HETEROTRIMERIC COMPLEX OF THE RGS DOMAIN OF RGS9, THE GAMMA SUBUNIT OF PHOSPHODIESTERASE AND THE GT/I1 CHIMERA ALPHA SUBUNIT [(RGS9)-(PDEGAMMA)-(GT/I1ALPHA)-(GDP)-(ALF4-)-(MG2+)]
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Guanine nucleotide-binding protein G(t) subunit alpha-1,Guanine nucleotide-binding protein G(i) subunit alpha-1,Guanine nucleotide-binding protein G(t) subunit alpha-1, MAGNESIUM ION, ...
Authors:Slep, K.C, Kercher, M.A, He, W, Cowan, C.W, Wensel, T.G, Sigler, P.B.
Deposit date:2000-09-05
Release date:2001-02-28
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Structural determinants for regulation of phosphodiesterase by a G protein at 2.0 A.
Nature, 409, 2001
1R54
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BU of 1r54 by Molmil
Crystal structure of the catalytic domain of human ADAM33
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ADAM 33, CALCIUM ION, ...
Authors:Orth, P, Reicher, P, Wang, W, Prosise, W.W, Yarosh-Tomaine, T, Hammond, G, Xiao, L, Mirza, U.A, Zou, J, Strickland, C, Taremi, S.S.
Deposit date:2003-10-09
Release date:2004-10-12
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structre of the catalytic domain of human ADAM33
J.Mol.Biol., 335, 2004
1FRY
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BU of 1fry by Molmil
THE SOLUTION STRUCTURE OF SHEEP MYELOID ANTIMICROBIAL PEPTIDE, RESIDUES 1-29 (SMAP29)
Descriptor: MYELOID ANTIMICROBIAL PEPTIDE
Authors:Tack, B.F, Sawai, M.V, Kearney, W.R, Robertson, A.D, Sherman, M.A, Wang, W, Hong, T, Boo, L.M, Wu, H, Waring, A.J, Lehrer, R.I.
Deposit date:2000-09-07
Release date:2002-03-08
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:SMAP-29 has two LPS-binding sites and a central hinge.
Eur.J.Biochem., 269, 2002
6N9V
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BU of 6n9v by Molmil
Structure of bacteriophage T7 lagging-strand DNA polymerase (D5A/E7A) and gp4 (helicase/primase) bound to DNA including RNA/DNA hybrid, and an incoming dTTP (LagS1)
Descriptor: DNA primase/helicase, DNA-directed DNA polymerase, MAGNESIUM ION, ...
Authors:Gao, Y, Fox, T, Val, N, Yang, W.
Deposit date:2018-12-04
Release date:2019-03-06
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structures and operating principles of the replisome.
Science, 363, 2019
2MT9
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BU of 2mt9 by Molmil
Solution structure of holo_FldB
Descriptor: FLAVIN MONONUCLEOTIDE, Flavodoxin-2
Authors:Jin, C, Fu, W, Ye, Q.
Deposit date:2014-08-15
Release date:2016-03-09
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Long-chain flavodoxin FldB from Escherichia coli
J.Biomol.Nmr, 60, 2014
4FVB
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BU of 4fvb by Molmil
Crystal structure of EV71 2A proteinase C110A mutant
Descriptor: 2A proteinase, ZINC ION
Authors:Cai, Q, Muhammad, Y, Liu, W, Gao, Z, Peng, X, Cai, Y, Wu, C, Zheng, Q, Li, J, Lin, T.
Deposit date:2012-06-29
Release date:2013-06-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Conformational Plasticity of 2A Proteinase from Enterovirus 71
J.Virol., 87, 2013
1R73
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BU of 1r73 by Molmil
Solution Structure of TM1492, the L29 ribosomal protein from Thermotoga maritima
Descriptor: 50S ribosomal protein L29
Authors:Peti, W, Etezady-Esfarjani, T, Herrmann, T, Klock, H.E, Lesley, S.A, Wuethrich, K, Joint Center for Structural Genomics (JCSG)
Deposit date:2003-10-17
Release date:2004-08-10
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:NMR for structural proteomics of Thermotoga maritima: Screening and structure determination
J.STRUCT.FUNCT.GENOM., 5, 2004
6MJU
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BU of 6mju by Molmil
human cGAS catalytic domain bound with the inhibitor G108
Descriptor: 1-[6,7-dichloro-9-(1H-pyrazol-4-yl)-1,3,4,5-tetrahydro-2H-pyrido[4,3-b]indol-2-yl]-2-hydroxyethan-1-one, Cyclic GMP-AMP synthase, ZINC ION
Authors:Lama, L, Adura, C, Xie, W, Tomita, D, Kamei, T, Kuryavyi, V, Gogakos, T, Steinberg, J.I, Miller, M, Ramos-Espiritu, L, Asano, Y, Hashizume, S, Aida, J, Imaeda, T, Okamoto, R, Jennings, A.J, Michinom, M, Kuroita, T, Stamford, A, Gao, P, Meinke, P, Glickman, J.F, Patel, D.J, Tuschl, T.
Deposit date:2018-09-22
Release date:2019-05-29
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Development of human cGAS-specific small-molecule inhibitors for repression of dsDNA-triggered interferon expression.
Nat Commun, 10, 2019
6MJX
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BU of 6mjx by Molmil
human cGAS catalytic domain bound with cGAMP
Descriptor: Cyclic GMP-AMP synthase, ZINC ION, cGAMP
Authors:Lama, L, Adura, C, Xie, W, Tomita, D, Kamei, T, Kuryavyi, V, Gogakos, T, Steinberg, J.I, Miller, M, Ramos-Espiritu, L, Asano, Y, Hashizume, S, Aida, J, Imaeda, T, Okamoto, R, Jennings, A.J, Michinom, M, Kuroita, T, Stamford, A, Gao, P, Meinke, P, Glickman, J.F, Patel, D.J, Tuschl, T.
Deposit date:2018-09-23
Release date:2019-05-29
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Development of human cGAS-specific small-molecule inhibitors for repression of dsDNA-triggered interferon expression.
Nat Commun, 10, 2019
4FYP
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BU of 4fyp by Molmil
Crystal Structure of Plant Vegetative Storage Protein
Descriptor: MAGNESIUM ION, Vegetative storage protein 1
Authors:Chen, Y, Wei, J, Wang, M, Gong, W, Zhang, M.
Deposit date:2012-07-05
Release date:2013-06-26
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The crystal structure of Arabidopsis VSP1 reveals the plant class C-like phosphatase structure of the DDDD superfamily of phosphohydrolases
Plos One, 7, 2012
1FQ3
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CRYSTAL STRUCTURE OF HUMAN GRANZYME B
Descriptor: GRANZYME B, SULFATE ION, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Estebanez-Perpina, E, Fuentes-Prior, P, Belorgey, D, Rubin, H, Bode, W.
Deposit date:2000-09-03
Release date:2001-01-31
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal structure of the caspase activator human granzyme B, a proteinase highly specific for an Asp-P1 residue.
Biol.Chem., 381, 2000
1FQI
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RGS9 RGS DOMAIN
Descriptor: REGULATOR OF G-PROTEIN SIGNALING 9
Authors:Slep, K.C, Kercher, M.A, He, W, Cowan, C.W, Wensel, T.G, Sigler, P.B.
Deposit date:2000-09-05
Release date:2001-02-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Structural determinants for regulation of phosphodiesterase by a G protein at 2.0 A.
Nature, 409, 2001
6MKY
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BU of 6mky by Molmil
Human SDS22
Descriptor: Protein phosphatase 1 regulatory subunit 7, SULFATE ION
Authors:Choy, M.S, Bolik-Coulon, N, Page, R, Peti, W.
Deposit date:2018-09-26
Release date:2018-12-12
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The structure of SDS22 provides insights into the mechanism of heterodimer formation with PP1.
Acta Crystallogr F Struct Biol Commun, 74, 2018
1W0C
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BU of 1w0c by Molmil
Inhibition of Leishmania major pteridine reductase (PTR1) by 2,4,6-triaminoquinazoline; structure of the NADP ternary complex.
Descriptor: 2,4,6-TRIAMINOQUINAZOLINE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, PTERIDINE REDUCTASE
Authors:Mcluskey, K, Gibellini, F, Carvalho, P, Avery, M, Hunter, W.
Deposit date:2004-06-02
Release date:2004-09-30
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Inhibition of Leishmania Major Pteridine Reductase by 2,4,6-Triaminoquinazoline: Structure of the Nadph Ternary Complex
Acta Crystallogr.,Sect.D, 60, 2004
1RCL
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THE THREE DIMENSIONAL STRUCTURE OF GUANINE-SPECIFIC RIBONUCLEASE F1 IN SOLUTION DETERMINED BY NMR SPECTROSCOPY AND DISTANCE GEOMETRY
Descriptor: RIBONUCLEASE F1
Authors:Nakai, T, Yoshikawa, W, Nakamura, H, Yoshida, H.
Deposit date:1994-08-08
Release date:1994-11-30
Last modified:2019-12-25
Method:SOLUTION NMR
Cite:The three-dimensional structure of guanine-specific ribonuclease F1 in solution determined by NMR spectroscopy and distance geometry.
Eur.J.Biochem., 208, 1992

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