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PDB: 12920 results

3B9D
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Crystal structure of Vibrio harveyi chitinase A complexed with pentasaccharide
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chitinase A
Authors:Songsiriritthigul, C, Aguda, A.H, Robinson, R.C, Suginta, W.
Deposit date:2007-11-05
Release date:2008-04-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Crystal structures of Vibrio harveyi chitinase A complexed with chitooligosaccharides: implications for the catalytic mechanism
J.Struct.Biol., 162, 2008
5UBB
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Crystal structure of human alpha N-terminal protein methyltransferase 1B
Descriptor: Alpha N-terminal protein methyltransferase 1B, S-ADENOSYLMETHIONINE, UNKNOWN ATOM OR ION
Authors:Dong, C, Zhu, L, Tempel, W, Dong, A, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2016-12-20
Release date:2017-03-22
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:An asparagine/glycine switch governs product specificity of human N-terminal methyltransferase NTMT2.
Commun Biol, 1, 2018
5UBI
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Catalytic core domain of Adenosine triphosphate phosphoribosyltransferase from Campylobacter jejuni with bound PRPP
Descriptor: 1,2-ETHANEDIOL, 1-O-pyrophosphono-5-O-phosphono-alpha-D-ribofuranose, ACETATE ION, ...
Authors:Mittelstaedt, G, Jiao, W, Livingstone, E.K, Parker, E.J.
Deposit date:2016-12-20
Release date:2017-12-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:A dimeric catalytic core relates the short and long forms of ATP-phosphoribosyltransferase.
Biochem. J., 475, 2018
2IBM
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A novel dimer interface and conformational changes revealed by an X-ray structure of B. subtilis SecA
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Preprotein translocase secA subunit
Authors:Zimmer, J, Li, W, Rapoport, T.A.
Deposit date:2006-09-11
Release date:2006-11-14
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:A Novel Dimer Interface and Conformational Changes Revealed by an X-ray Structure of B. subtilis SecA.
J.Mol.Biol., 364, 2006
5DPQ
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Crystal Structure of E72A mutant of domain swapped dimer Human Cellular Retinol Binding Protein
Descriptor: ACETATE ION, Retinol-binding protein 2
Authors:Assar, Z, Nossoni, Z, Wang, W, Geiger, J.H, Borhan, B.
Deposit date:2015-09-14
Release date:2016-09-14
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.775 Å)
Cite:Domain-Swapped Dimers of Intracellular Lipid-Binding Proteins: Evidence for Ordered Folding Intermediates.
Structure, 24, 2016
5UBA
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Human RNA Pseudouridylate Synthase Domain Containing 4
Descriptor: CALCIUM ION, CHLORIDE ION, RNA pseudouridylate synthase domain-containing protein 4, ...
Authors:DONG, A, ZENG, H, TEMPEL, W, Bountra, C, Arrowsmith, C.H, Edwards, A.M, BROWN, P.J, WU, H, Structural Genomics Consortium (SGC)
Deposit date:2016-12-20
Release date:2017-02-22
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:The Crystal Structure of Human Pseudouridylate Synthase Domain Containing 4. To be published
to be published
1PTF
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BU of 1ptf by Molmil
THE 1.6 ANGSTROMS STRUCTURE OF HISTIDINE-CONTAINING PHOSPHOTRANSFER PROTEIN HPR FROM STREPTOCOCCUS FAECALIS
Descriptor: HISTIDINE-CONTAINING PHOSPHOCARRIER PROTEIN HPR
Authors:Jia, Z, Quail, W, Delbaere, L.
Deposit date:1993-10-04
Release date:1994-01-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The 1.6 A structure of histidine-containing phosphotransfer protein HPr from Streptococcus faecalis.
J.Mol.Biol., 236, 1994
2B3A
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Solution structure of the Ras-binding domain of the Ral Guanosine Dissociation Stimulator
Descriptor: Ral guanine nucleotide dissociation stimulator
Authors:Gronwald, W, Maurer, T, Fuechsl, R, Wohlgemuth, S, Herrmann, C, Kalbitzer, H.R.
Deposit date:2005-09-20
Release date:2006-09-26
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:New insights into binding of the possible cancer target RalGDS
To be Published
2I6T
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Orthorhombic Structure of the LDH domain of Human Ubiquitin-conjugating Enzyme E2-like Isoform A
Descriptor: GLYCEROL, SULFATE ION, UBIQUITIN-CONJUGATING ENZYME E2-LIKE ISOFORM A
Authors:Walker, J.R, Avvakumov, G.V, Xue, S, Newman, E.M, Finerty Jr, P.J, Butler-Cole, C, Tempel, W, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Dhe-Paganon, S.
Deposit date:2006-08-29
Release date:2006-10-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Investigation into the L-lactate Dehydrogenase Domain of Human Ubiquitin-conjugating Enzyme E2-like Isoform A
To be Published
2B34
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Structure of MAR1 Ribonuclease from Caenorhabditis elegans
Descriptor: MAR1 Ribonuclease
Authors:Schormann, N, Karpova, E, Li, S, Symersky, J, Zhang, Y, Lu, S, Zhou, Q, Lin, G, Cao, Z, Luo, M, Qiu, S, Luan, C.-H, Luo, D, Huang, W, Shang, Q, McKinstry, A, An, J, Tsao, J, Carson, M, Stinnett, M, Chen, Y, Johnson, D, Gary, R, Arabshahi, A, Bunzel, R, Bray, T, DeLucas, L, Southeast Collaboratory for Structural Genomics (SECSG)
Deposit date:2005-09-19
Release date:2005-09-27
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.141 Å)
Cite:Structure of MAR1 Ribonuclease from Caenorhabditis elegans
To be Published
3B3A
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Structure of E163K/R145E DJ-1
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Protein DJ-1
Authors:Lakshminarasimhan, M, Maldonado, M.T, Zhou, W, Fink, A.L, Wilson, M.A.
Deposit date:2007-10-19
Release date:2008-01-15
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural Impact of Three Parkinsonism-Associated Missense Mutations on Human DJ-1.
Biochemistry, 47, 2008
2I7C
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The crystal structure of spermidine synthase from p. falciparum in complex with AdoDATO
Descriptor: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, GLYCEROL, S-ADENOSYL-1,8-DIAMINO-3-THIOOCTANE, ...
Authors:Qiu, W, Dong, A, Ren, H, Wu, H, Wasney, G, Vedadi, M, Lew, J, Kozieradski, I, Edwards, A.M, Arrowsmith, C.H, Weigelt, J, Sundstrom, M, Plotnikov, A.N, Bochkarev, A, Hui, R, Structural Genomics Consortium (SGC)
Deposit date:2006-08-30
Release date:2006-09-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Crystal structure of Plasmodium falciparum spermidine synthase in complex with the substrate decarboxylated S-adenosylmethionine and the potent inhibitors 4MCHA and AdoDATO.
J.Mol.Biol., 373, 2007
2B5U
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BU of 2b5u by Molmil
Crystal Structure Of Colicin E3 V206C Mutant In Complex With Its Immunity Protein
Descriptor: CITRIC ACID, Colicin E3, Colicin E3 immunity protein
Authors:Nallini Vijayarangan, A, Nithianantham, S, Nan, W, Jakes, K, Shoham, M.
Deposit date:2005-09-29
Release date:2006-11-07
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure Of Colicin E3 In Complex With Its Immunity Protein
TO BE PUBLISHED
5E1L
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BU of 5e1l by Molmil
Structural and functional analysis of the E. coli FtsZ interacting protein, ZapC, reveals insight into molecular properties of a novel Z ring stabilizing protein
Descriptor: Cell division protein ZapC
Authors:Schumacher, M.A, Huang, K.-H, Tchorzewski, L, Zeng, W, Janakiraman, A.
Deposit date:2015-09-29
Release date:2015-12-23
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural and Functional Analyses Reveal Insights into the Molecular Properties of the Escherichia coli Z Ring Stabilizing Protein, ZapC.
J.Biol.Chem., 291, 2016
2AGQ
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Fidelity of Dpo4: effect of metal ions, nucleotide selection and pyrophosphorolysis
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, 5'-D(*GP*GP*CP*TP*AP*CP*AP*GP*GP*AP*CP*TP*(DOC))-3', 5'-D(*TP*CP*AP*TP*GP*AP*GP*TP*CP*CP*TP*GP*TP*AP*GP*CP*C)-3', ...
Authors:Ling, H, Yang, W.
Deposit date:2005-07-27
Release date:2005-09-06
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Fidelity of Dpo4: effect of metal ions, nucleotide selection and pyrophosphorolysis.
Embo J., 24, 2005
3C00
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Crystal structural of the mutated G247T EscU/SpaS C-terminal domain
Descriptor: EscU
Authors:Zarivach, R, Deng, W, Vuckovic, M, Felise, H.B, Nguyen, H.V, Miller, S.I, Finlay, B.B, Strynadka, N.C.J.
Deposit date:2008-01-18
Release date:2008-04-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:Structural analysis of the essential self-cleaving type III secretion proteins EscU and SpaS.
Nature, 453, 2008
5E4N
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BU of 5e4n by Molmil
3-Deoxy-D-arabino-heptulosonate 7-phosphate synthase from Mycobacterium tuberculosis with D-tyrosine bound in the tyrosine and phenylalanine binding sites
Descriptor: 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase, CHLORIDE ION, D-TYROSINE, ...
Authors:Reichau, S, Jiao, W, Parker, E.J.
Deposit date:2015-10-06
Release date:2016-06-01
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Probing the Sophisticated Synergistic Allosteric Regulation of Aromatic Amino Acid Biosynthesis in Mycobacterium tuberculosis Using -Amino Acids.
Plos One, 11, 2016
3DJ7
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BU of 3dj7 by Molmil
Crystal structure of the mouse Aurora-A catalytic domain (Asn186->Gly, Lys240->Arg, Met302->Leu) in complex with Compound 130.
Descriptor: 1-(5-{2-[(6-amino-5-bromopyrimidin-4-yl)amino]ethyl}-1,3-thiazol-2-yl)-3-[3-(trifluoromethyl)phenyl]urea, serine/threonine kinase 6
Authors:Elling, R.A, Yang, W, Erlanson, D.A, Tangonan, B.T, Hansen, S.K, Romanowski, M.J.
Deposit date:2008-06-22
Release date:2009-05-05
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:New fragment-based drug discovery
To be Published
5T0V
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BU of 5t0v by Molmil
Architecture of the Yeast Mitochondrial Iron-Sulfur Cluster Assembly Machinery: the Sub-Complex Formed by the Iron Donor, Yfh1, and the Scaffold, Isu1
Descriptor: Frataxin homolog, mitochondrial, Iron sulfur cluster assembly protein 1
Authors:Ranatunga, W, Gakh, O, Galeano, B.K, Smith IV, D.Y, Soderberg, C.A, Al-Karadaghi, S, Thompson, J.R, Isaya, G.
Deposit date:2016-08-16
Release date:2016-08-31
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (17.5 Å)
Cite:Architecture of the Yeast Mitochondrial Iron-Sulfur Cluster Assembly Machinery: the Sub-Complex Formed by the Iron Donor, Yfh1, and the Scaffold, Isu1
J. Biol. Chem., 291, 2016
3DL9
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Crystal structure of CYP2R1 in complex with 1-alpha-hydroxy-vitamin D2
Descriptor: (1S,3R,5Z,7E,22E)-9,10-secoergosta-5,7,10,22-tetraene-1,3-diol, Cycloheptakis-(1-4)-(alpha-D-glucopyranose), Cytochrome P450 2R1, ...
Authors:Strushkevich, N.V, Tempel, W, Gilep, A.A, Loppnau, P, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Wilkstrom, M, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2008-06-26
Release date:2008-08-05
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.721 Å)
Cite:Crystal structure of CYP2R1 in complex with 1-alpha-hydroxy-vitamin D2.
To be Published
2AOQ
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BU of 2aoq by Molmil
Crystal structure of MutH-unmethylated DNA complex
Descriptor: 5'-D(*GP*CP*AP*TP*GP*AP*TP*CP*AP*TP*GP*C)-3', CALCIUM ION, DNA mismatch repair protein mutH
Authors:Lee, J.Y, Chang, J, Joseph, N, Ghirlando, R, Rao, D.N, Yang, W.
Deposit date:2005-08-13
Release date:2005-10-11
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:MutH complexed with hemi- and unmethylated DNAs: coupling base recognition and DNA cleavage.
Mol.Cell, 20, 2005
2AS0
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Crystal Structure of PH1915 (APC 5817): A Hypothetical RNA Methyltransferase
Descriptor: hypothetical protein PH1915
Authors:Sun, W, Xu, X, Pavlova, M, Edwards, A.M, Joachimiak, A, Savchenko, A, Christendat, D, Midwest Center for Structural Genomics (MCSG)
Deposit date:2005-08-22
Release date:2005-09-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The crystal structure of a novel SAM-dependent methyltransferase PH1915 from Pyrococcus horikoshii.
Protein Sci., 14, 2005
5GXT
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BU of 5gxt by Molmil
Crystal structure of PigG
Descriptor: MAGNESIUM ION, Maltose-binding periplasmic protein,PigG
Authors:Zhang, F, Ran, T, Xu, D, Wang, W.
Deposit date:2016-09-20
Release date:2017-07-19
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.245 Å)
Cite:Crystal structure of MBP-PigG fusion protein and the essential function of PigG in the prodigiosin biosynthetic pathway in Serratia marcescens FS14.
Int. J. Biol. Macromol., 99, 2017
5H0S
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BU of 5h0s by Molmil
EM Structure of VP1A and VP1B
Descriptor: VP1
Authors:Li, X, Zhou, N, Xu, B, Chen, W, Zhu, B, Wang, X, Wang, J, Liu, H, Cheng, L.
Deposit date:2016-10-06
Release date:2017-01-25
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Near-Atomic Resolution Structure Determination of a Cypovirus Capsid and Polymerase Complex Using Cryo-EM at 200kV
J. Mol. Biol., 429, 2017
5SVE
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Structure of Calcineurin in complex with NFATc1 LxVP peptide
Descriptor: CALCIUM ION, Calcineurin subunit B type 1, FE (III) ION, ...
Authors:Sheftic, S.R, Page, R, Peti, W.
Deposit date:2016-08-05
Release date:2017-01-11
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.596 Å)
Cite:Investigating the human Calcineurin Interaction Network using the pi LxVP SLiM.
Sci Rep, 6, 2016

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