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PDB: 12895 results

5JGK
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Crystal structure of GtmA in complex with SAH
Descriptor: S-ADENOSYL-L-HOMOCYSTEINE, SULFATE ION, UbiE/COQ5 family methyltransferase, ...
Authors:Dolan, S.K, Bock, T, Hering, V, Jones, G.W, Blankenfeldt, W, Dolye, S.
Deposit date:2016-04-20
Release date:2017-03-01
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:Structural, mechanistic and functional insight into gliotoxinbis-thiomethylation inAspergillus fumigatus.
Open Biol, 7, 2017
7TNT
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The tubulin-based conoid from detergent-extract Toxoplasma gondii cells
Descriptor: Tubulin alpha chain, Tubulin beta chain
Authors:Sun, S.Y, Pintilie, G.D, Chen, M, Chiu, W.
Deposit date:2022-01-21
Release date:2022-06-22
Method:ELECTRON MICROSCOPY (9.3 Å)
Cite:Cryo-ET of Toxoplasma parasites gives subnanometer insight into tubulin-based structures.
Proc.Natl.Acad.Sci.USA, 119, 2022
7TNS
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BU of 7tns by Molmil
Subpellicular microtubule from detergent-extract Toxoplasma gondii cells
Descriptor: Microtubule associated protein SPM1, PDI family protein, Tubulin alpha chain, ...
Authors:Sun, S.Y, Pintilie, G.D, Chen, M, Chiu, W.
Deposit date:2022-01-21
Release date:2022-06-22
Method:ELECTRON MICROSCOPY (6.7 Å)
Cite:Cryo-ET of Toxoplasma parasites gives subnanometer insight into tubulin-based structures.
Proc.Natl.Acad.Sci.USA, 119, 2022
1CQ0
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BU of 1cq0 by Molmil
SOLUTION STRUCTURE OF A HUMAN HYPOCRETIN-2/OREXIN-B'SOLUTION STRUCTURE OF A HUMAN HYPOCRETIN-2/OREXIN-B '
Descriptor: PROTEIN (NEW HYPOTHALAMIC NEUROPEPTIDE/OREXIN-B28)
Authors:Lee, K.-H, Bang, E.J, Chae, K.-J, Lee, D.W, Lee, W.
Deposit date:1999-08-04
Release date:2000-01-10
Last modified:2024-04-10
Method:SOLUTION NMR
Cite:Solution structure of a new hypothalamic neuropeptide, human hypocretin-2/orexin-B.
Eur.J.Biochem., 266, 1999
1EDO
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BU of 1edo by Molmil
THE X-RAY STRUCTURE OF BETA-KETO ACYL CARRIER PROTEIN REDUCTASE FROM BRASSICA NAPUS COMPLEXED WITH NADP+
Descriptor: BETA-KETO ACYL CARRIER PROTEIN REDUCTASE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Fisher, M, Kroon, J.T, Martindale, W, Stuitje, A.R, Slabas, A.R, Rafferty, J.B.
Deposit date:2000-01-28
Release date:2001-01-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The X-ray structure of Brassica napus beta-keto acyl carrier protein reductase and its implications for substrate binding and catalysis.
Structure Fold.Des., 8, 2000
1EAP
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BU of 1eap by Molmil
CRYSTAL STRUCTURE OF A CATALYTIC ANTIBODY WITH A SERINE PROTEASE ACTIVE SITE
Descriptor: IGG2B-KAPPA 17E8 FAB (HEAVY CHAIN), IGG2B-KAPPA 17E8 FAB (LIGHT CHAIN), PHENYL[1-(N-SUCCINYLAMINO)PENTYL]PHOSPHONATE
Authors:Zhou, G.W, Guo, J, Huang, W, Scanlan, T.S, Fletterick, R.J.
Deposit date:1994-08-10
Release date:1994-12-20
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of a catalytic antibody with a serine protease active site.
Science, 265, 1994
2AGP
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BU of 2agp by Molmil
Fidelity of Dpo4: effect of metal ions, nucleotide selection and pyrophosphorolysis
Descriptor: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*(DOC)-3'), ...
Authors:Ling, H, Yang, W.
Deposit date:2005-07-27
Release date:2005-09-06
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Fidelity of Dpo4: effect of metal ions, nucleotide selection and pyrophosphorolysis.
Embo J., 24, 2005
2WFV
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BU of 2wfv by Molmil
Crystal structure of DILP5 variant C4
Descriptor: PROBABLE INSULIN-LIKE PEPTIDE 5 A CHAIN, PROBABLE INSULIN-LIKE PEPTIDE 5 B CHAIN
Authors:Kulahin, N, Schluckebier, G, Sajid, W, De Meyts, P.
Deposit date:2009-04-15
Release date:2010-05-26
Last modified:2012-04-18
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural and Biological Properties of the Drosophila Insulin-Like Peptide 5 Show Evolutionary Conservation.
J.Biol.Chem., 286, 2011
2AHG
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BU of 2ahg by Molmil
Unsaturated glucuronyl hydrolase mutant D88N with dGlcA-GalNAc
Descriptor: 4-deoxy-alpha-L-threo-hex-4-enopyranuronic acid-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose, unsaturated glucuronyl hydrolase
Authors:Itoh, T, Hashimoto, W, Mikami, B, Murata, K.
Deposit date:2005-07-28
Release date:2006-08-15
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of Unsaturated Glucuronyl Hydrolase Complexed with Substrate: MOLECULAR INSIGHTS INTO ITS CATALYTIC REACTION MECHANISM
J.Biol.Chem., 281, 2006
5IWE
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BU of 5iwe by Molmil
E45Q mutant of phenazine biosynthesis protein PhzF in complex with (5R,6R)-6-azaniumyl-5-ethoxycyclohexa-1,3-diene-1-carboxylate
Descriptor: (5R,6R)-6-azaniumyl-5-ethoxycyclohexa-1,3-diene-1-carboxylate, 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, ...
Authors:Diederich, C, Blankenfeldt, W.
Deposit date:2016-03-22
Release date:2017-03-29
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Mechanisms and Specificity of Phenazine Biosynthesis Protein PhzF.
Sci Rep, 7, 2017
2W35
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BU of 2w35 by Molmil
Structures of endonuclease V with DNA reveal initiation of deaminated adenine repair
Descriptor: 5'-D(*AP*GP*CP*CP*GP*TP)-3', 5'-D(*AP*TP*GP*CP*GP*AP*CP*IP*GP)-3', Endonuclease V, ...
Authors:Dalhus, B, Arvai, A.S, Rosnes, I, Olsen, O.E, Backe, P.H, Alseth, I, Gao, H, Cao, W, Tainer, J.A, Bjoras, M.
Deposit date:2008-11-06
Release date:2009-01-20
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structures of Endonuclease V with DNA Reveal Initiation of Deaminated Adenine Repair.
Nat.Struct.Mol.Biol., 16, 2009
2AQU
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BU of 2aqu by Molmil
Structure of HIV-1 protease bound to atazanavir
Descriptor: (3S,8S,9S,12S)-3,12-BIS(1,1-DIMETHYLETHYL)-8-HYDROXY-4,11-DIOXO-9-(PHENYLMETHYL)-6-[[4-(2-PYRIDINYL)PHENYL]METHYL]-2,5, 6,10,13-PENTAAZATETRADECANEDIOIC ACID DIMETHYL ESTER, HIV-1 Protease
Authors:Clemente, J.C, Coman, R.M, Thiaville, M.M, Janka, L.K, Jeung, J.A, Nukoolkarn, S, Govindasamy, L, Agbandje-McKenna, M, McKenna, R, Leelamanit, W, Goodenow, M.M, Dunn, B.M.
Deposit date:2005-08-18
Release date:2006-08-29
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Analysis of HIV-1 CRF_01 A/E protease inhibitor resistance: structural determinants for maintaining sensitivity and developing resistance to atazanavir.
Biochemistry, 45, 2006
2WBX
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BU of 2wbx by Molmil
Crystal structure of mouse cadherin-23 EC1
Descriptor: CADHERIN-23, CALCIUM ION
Authors:Sotomayor, M, Weihofen, W, Gaudet, R, Corey, D.P.
Deposit date:2009-03-05
Release date:2010-04-21
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural Determinants of Cadherin-23 Function in Hearing and Deafness.
Neuron, 66, 2010
1CS6
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BU of 1cs6 by Molmil
N-TERMINAL FRAGMENT OF AXONIN-1 FROM CHICKEN
Descriptor: AXONIN-1, GLYCEROL
Authors:Freigang, J, Proba, K, Diederichs, K, Sonderegger, P, Welte, W.
Deposit date:1999-08-17
Release date:2000-05-19
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The crystal structure of the ligand binding module of axonin-1/TAG-1 suggests a zipper mechanism for neural cell adhesion.
Cell(Cambridge,Mass.), 101, 2000
5J41
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BU of 5j41 by Molmil
Glutathione S-transferase bound with hydrolyzed Piperlongumine
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 3-(3,4,5-trimethoxyphenyl)propanoic acid, GLUTATHIONE, ...
Authors:Harshbarger, W, Gondi, S, Ficarro, S, Hunter, J, Udayakumar, D, Gurbani, D, Marto, J, Westover, K.
Deposit date:2016-03-31
Release date:2016-11-30
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.19035351 Å)
Cite:Structural and Biochemical Analyses Reveal the Mechanism of Glutathione S-Transferase Pi 1 Inhibition by the Anti-cancer Compound Piperlongumine.
J. Biol. Chem., 292, 2017
1CT4
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BU of 1ct4 by Molmil
CRYSTAL STRUCTURE OF THE OMTKY3 P1 VARIANT OMTKY3-VAL18I IN COMPLEX WITH SGPB
Descriptor: OVOMUCOID INHIBITOR, PROTEINASE B
Authors:Bateman, K.S, Anderson, S, Lu, W, Qasim, M.A, Laskowski Jr, M, James, M.N.G.
Deposit date:1999-08-18
Release date:2000-01-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Deleterious effects of beta-branched residues in the S1 specificity pocket of Streptomyces griseus proteinase B (SGPB): crystal structures of the turkey ovomucoid third domain variants Ile18I, Val18I, Thr18I, and Ser18I in complex with SGPB.
Protein Sci., 9, 2000
2WVO
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BU of 2wvo by Molmil
Structure of the HET-S N-terminal domain
Descriptor: CHLORIDE ION, SMALL S PROTEIN
Authors:Greenwald, J, Buhtz, C, Ritter, C, Kwiatkowski, W, Choe, S, Saupe, S.J, Riek, R.
Deposit date:2009-10-19
Release date:2010-07-28
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The Mechanism of Prion Inhibition by Het-S.
Mol.Cell, 38, 2010
1JIV
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BU of 1jiv by Molmil
T4 phage BGT in complex with Mg2+ : Form II
Descriptor: DNA BETA-GLUCOSYLTRANSFERASE, MAGNESIUM ION, URIDINE-5'-DIPHOSPHATE
Authors:Morera, S, Lariviere, L, Kurzeck, J, Aschke-Sonnenborn, U, Freemont, P.S, Janin, J, Ruger, W.
Deposit date:2001-07-03
Release date:2001-08-15
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:High resolution crystal structures of T4 phage beta-glucosyltransferase: induced fit and effect of substrate and metal binding.
J.Mol.Biol., 311, 2001
1CWY
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BU of 1cwy by Molmil
CRYSTAL STRUCTURE OF AMYLOMALTASE FROM THERMUS AQUATICUS, A GLYCOSYLTRANSFERASE CATALYSING THE PRODUCTION OF LARGE CYCLIC GLUCANS
Descriptor: AMYLOMALTASE
Authors:Przylas, I, Tomoo, K, Terada, Y, Takaha, T, Fuji, K, Saenger, W, Straeter, N.
Deposit date:1999-08-27
Release date:2001-02-28
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of amylomaltase from thermus aquaticus, a glycosyltransferase catalysing the production of large cyclic glucans.
J.Mol.Biol., 296, 2000
1JJ9
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BU of 1jj9 by Molmil
Crystal Structure of MMP8-Barbiturate Complex Reveals Mechanism for Collagen Substrate Recognition
Descriptor: 2-HYDROXY-5-[4-(2-HYDROXY-ETHYL)-PIPERIDIN-1-YL]-5-PHENYL-1H-PYRIMIDINE-4,6-DIONE, CALCIUM ION, Matrix Metalloproteinase 8, ...
Authors:Brandstetter, H, Grams, F, Glitz, D, Lang, A, Huber, R, Bode, W, Krell, H.-W, Engh, R.A.
Deposit date:2001-07-04
Release date:2001-08-01
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:The 1.8-A crystal structure of a matrix metalloproteinase 8-barbiturate inhibitor complex reveals a previously unobserved mechanism for collagenase substrate recognition.
J.Biol.Chem., 276, 2001
2B2T
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BU of 2b2t by Molmil
Tandem chromodomains of human CHD1 complexed with Histone H3 Tail containing trimethyllysine 4 and phosphothreonine 3
Descriptor: Chromodomain-helicase-DNA-binding protein 1, Histone H3 tail
Authors:Flanagan IV, J.F, Mi, L.-Z, Chruszcz, M, Cymborowski, M, Clines, K.L, Kim, Y, Minor, W, Rastinejad, F, Khorasanizadeh, S.
Deposit date:2005-09-19
Release date:2005-12-27
Last modified:2022-04-13
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Double chromodomains cooperate to recognize the methylated histone H3 tail.
Nature, 438, 2005
1CZ5
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BU of 1cz5 by Molmil
NMR STRUCTURE OF VAT-N: THE N-TERMINAL DOMAIN OF VAT (VCP-LIKE ATPASE OF THERMOPLASMA)
Descriptor: VCP-LIKE ATPASE
Authors:Coles, M, Diercks, T, Liermann, J, Groeger, A, Rockel, B, Baumeister, W, Koretke, K, Lupas, A, Peters, J, Kessler, H.
Deposit date:1999-09-01
Release date:1999-10-12
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The solution structure of VAT-N reveals a 'missing link' in the evolution of complex enzymes from a simple betaalphabetabeta element.
Curr.Biol., 9, 1999
2X7R
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BU of 2x7r by Molmil
Crystal structure of a late fusion intermediate of HIV-1 gp41
Descriptor: CHLORIDE ION, SODIUM ION, TRANSMEMBRANE PROTEIN GP41
Authors:Natrajan, G, Buzon, V, Weissenhorn, W.
Deposit date:2010-03-03
Release date:2010-05-26
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of HIV-1 Gp41 Including Both Fusion Peptide and Membrane Proximal External Regions.
Plos Pathog., 6, 2010
5K02
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BU of 5k02 by Molmil
Structure of human SOD1 with T2D mutation
Descriptor: COPPER (II) ION, Superoxide dismutase [Cu-Zn], ZINC ION
Authors:Fay, J.M, Zhu, C, Cui, W, Ke, H, Dokholyan, N.V.
Deposit date:2016-05-17
Release date:2016-11-23
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:A Phosphomimetic Mutation Stabilizes SOD1 and Rescues Cell Viability in the Context of an ALS-Associated Mutation.
Structure, 24, 2016
2CP8
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Solution structure of the RSGI RUH-046, a UBA domain from human Next to BRCA1 gene 1 protein (KIAA0049 protein) R923H variant
Descriptor: Next to BRCA1 gene 1 protein
Authors:Ohashi, W, Hirota, H, Yamazaki, T, Muto, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-05-19
Release date:2005-11-19
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the RSGI RUH-046, a UBA domain from human Next to BRCA1 gene 1 protein (KIAA0049 protein) R923H variant
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