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PDB: 12479 件

2KY7
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NMR Structural Studies on the Covalent DNA Binding of a Pyrrolobenzodiazepine-Naphthalimide Conjugate
分子名称: 2-{2-[4-(3-{[(11aS)-7-methoxy-5-oxo-2,3,5,10,11,11a-hexahydro-1H-pyrrolo[2,1-c][1,4]benzodiazepin-8-yl]oxy}propyl)piperazin-1-yl]ethyl}-1H-benzo[de]isoquinoline-1,3(2H)-dione, 5'-D(*AP*AP*CP*AP*AP*TP*TP*GP*TP*T)-3'
著者Rettig, M, Langel, W, Kamal, A, Weisz, K.
登録日2010-05-17
公開日2010-06-02
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献NMR structural studies on the covalent DNA binding of a pyrrolobenzodiazepine-naphthalimide conjugate
Org.Biomol.Chem., 8, 2010
3GF3
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Glutaconyl-coA decarboxylase A subunit from Clostridium symbiosum co-crystallized with glutaconyl-coA
分子名称: CHLORIDE ION, CROTONYL COENZYME A, Glutaconyl-CoA decarboxylase subunit A
著者Kress, D, Brugel, D, Buckel, W, Essen, L.-O.
登録日2009-02-26
公開日2009-07-28
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献An asymmetric model for Na+-translocating glutaconyl-CoA decarboxylases
J.Biol.Chem., 284, 2009
1Q5A
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S-shaped trans interactions of cadherins model based on fitting C-cadherin (1L3W) to 3D map of desmosomes obtained by electron tomography
分子名称: 2-acetamido-2-deoxy-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者He, W, Cowin, P, Stokes, D.L.
登録日2003-08-06
公開日2003-10-07
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (30 Å)
主引用文献Untangling Desmosomal Knots with Electron Tomography
Science, 302, 2003
1PNV
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Crystal Structure of TDP-epi-Vancosaminyltransferase GtfA in complexes with TDP and Vancomycin
分子名称: GLYCOSYLTRANSFERASE GTFA, THYMIDINE-5'-DIPHOSPHATE, VANCOMYCIN, ...
著者Mulichak, A.M, Losey, H.C, Lu, W, Wawrzak, Z, Walsh, C.T, Garavito, R.M.
登録日2003-06-13
公開日2003-08-12
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of the Tdp-Epi-Vancosaminyltransferase Gtfa from the Chloroeremomycin Biosynthetic Pathway.
Proc.Natl.Acad.Sci.USA, 100, 2003
1POK
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Crystal structure of Isoaspartyl Dipeptidase
分子名称: ASPARAGINE, Isoaspartyl dipeptidase, SULFATE ION, ...
著者Jozic, D, Kaiser, J.T, Huber, R, Bode, W, Maskos, K.
登録日2003-06-15
公開日2004-06-22
最終更新日2018-05-30
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献X-ray structure of isoaspartyl dipeptidase from E.coli: a dinuclear zinc peptidase evolved from amidohydrolases.
J.Mol.Biol., 332, 2003
3DZ8
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BU of 3dz8 by Molmil
Crystal structure of human Rab3B GTPase bound with GDP
分子名称: GUANOSINE-5'-DIPHOSPHATE, Ras-related protein Rab-3B, UNKNOWN ATOM OR ION
著者Shen, Y, Tong, Y, Sukumar, D, Tempel, W, Loppnau, P, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Wilkstrom, M, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
登録日2008-07-29
公開日2008-08-12
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of human Rab3B GTPase bound with GDP
To be Published
1Q5R
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The Rhodococcus 20S proteasome with unprocessed pro-peptides
分子名称: proteasome alpha-type subunit 1, proteasome beta-type subunit 1
著者Kwon, Y.D, Nagy, I, Adams, P.D, Baumeister, W, Jap, B.K.
登録日2003-08-08
公開日2003-12-16
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Crystal structures of the Rhodococcus proteasome with and without its pro-peptides: implications for the role of the pro-peptide in proteasome assembly.
J.Mol.Biol., 335, 2004
2KM6
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NMR structure of the NLRP7 Pyrin domain
分子名称: NACHT, LRR and PYD domains-containing protein 7
著者Pinheiro, A, Proell, M, Schwarzenbacher, R, Peti, W.
登録日2009-07-21
公開日2010-06-09
最終更新日2024-05-08
実験手法SOLUTION NMR
主引用文献Three-dimensional structure of the NLRP7 pyrin domain: insight into pyrin-pyrin-mediated effector domain signaling in innate immunity.
J.Biol.Chem., 285, 2010
1POJ
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Isoaspartyl Dipeptidase with bound inhibitor
分子名称: 2-{[[(1S)-1-AMINO-2-CARBOXYETHYL](DIHYDROXY)PHOSPHORANYL]METHYL}-4-METHYLPENTANOIC ACID, Isoaspartyl dipeptidase, ZINC ION
著者Jozic, D, Kaiser, J.T, Huber, R, Bode, W, Maskos, K.
登録日2003-06-15
公開日2004-06-22
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献X-ray structure of isoaspartyl dipeptidase from E.coli: a dinuclear zinc peptidase evolved from amidohydrolases.
J.Mol.Biol., 332, 2003
3DAX
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BU of 3dax by Molmil
Crystal structure of human CYP7A1
分子名称: Cytochrome P450 7A1, PROTOPORPHYRIN IX CONTAINING FE, UNKNOWN ATOM OR ION
著者Strushkevich, N.V, Tempel, W, Dombrovski, L, Dong, A, Loppnau, P, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Wilkstrom, M, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
登録日2008-05-30
公開日2008-08-05
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Crystal structure of human CYP7A1
To be Published
2KDX
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Solution structure of HypA protein
分子名称: Hydrogenase/urease nickel incorporation protein hypA, ZINC ION
著者Xia, W, Li, H, Sze, K.-H.
登録日2009-01-20
公開日2009-10-20
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structure of a nickel chaperone, HypA, from Helicobacter pylori reveals two distinct metal binding sites
J.Am.Chem.Soc., 131, 2009
2KQ1
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Solution Structure Of Protein BH0266 From Bacillus halodurans. Northeast Structural Genomics Consortium Target BhR97a
分子名称: BH0266 protein
著者Wu, Y, Eletsky, A, Lee, D, Sathyamoorthy, B, Buchwald, W, Hua, J, Ciccosanti, C, He, Y, Hamilton, K, Acton, T, Xiao, R, Everett, J, Lee, H, Prestegard, J, Montelione, G.T, Szyperski, T, Northeast Structural Genomics Consortium (NESG)
登録日2009-10-23
公開日2009-12-22
最終更新日2024-05-08
実験手法SOLUTION NMR
主引用文献Solution Structure Of Protein BH0266 From Bacillus halodurans
To be Published
2L84
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BU of 2l84 by Molmil
Solution NMR structures of CBP bromodomain with small molecule j28
分子名称: 5-[(E)-(2-amino-4-hydroxy-5-methylphenyl)diazenyl]-2,4-dimethylbenzenesulfonic acid, CREB-binding protein
著者Borah, J.C, Mujtaba, S, Karakikes, I, Zeng, L, Muller, M, Patel, J, Moshkina, N, Morohashi, K, Zhang, W, Gerona-Navarro, G, Hajjar, R.J, Zhou, M.
登録日2011-01-03
公開日2011-01-19
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献A Small Molecule Binding to the Coactivator CREB-Binding Protein Blocks Apoptosis in Cardiomyocytes.
Chem.Biol., 18, 2011
2L1F
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BU of 2l1f by Molmil
Structure of a conserved retroviral RNA packaging element by NMR spectroscopy and cryo-electron tomography
分子名称: RNA (65-MER), RNA (66-MER)
著者Summers, M.F, Irobalieva, R.N, Tolbert, B, Smalls-Manty, A, Iyalla, K, Loeliger, K, D'Souza, V, Khant, H, Schmid, M, Garcia, E, Telesnitsky, A, Chiu, W, Miyazaki, Y.
登録日2010-07-28
公開日2010-10-27
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structure of a conserved retroviral RNA packaging element by NMR spectroscopy and cryo-electron tomography.
J.Mol.Biol., 404, 2010
2L3M
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BU of 2l3m by Molmil
Solution structure of the putative copper-ion-binding protein from Bacillus anthracis str. Ames
分子名称: Copper-ion-binding protein
著者Zhang, Y, Winsor, J, Dubrovska, I, Anderson, W, Radhakrishnan, I, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2010-09-16
公開日2011-01-12
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献To be published
To be Published
1Q6S
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BU of 1q6s by Molmil
THE STRUCTURE OF PHOSPHOTYROSINE PHOSPHATASE 1B IN COMPLEX WITH COMPOUND 9
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 6-[4-((2R)-2-(1H-1,2,3-BENZOTRIAZOL-1-YL)-3-{4-[DIFLUORO(PHOSPHONO)METHYL]PHENYL}-2-PHENYLPROPYL)PHENYL]-2-METHYLQUINOLIN-8-YLPHOSPHONIC ACID, CHLORIDE ION, ...
著者Scapin, G, Patel, S.B, Becker, J.W, Wang, Q, Desponts, C, Waddleton, D, Skorey, K, Cromlish, W, Bayly, C, Therien, M, Gauthier, J.Y, Li, C.S, Lau, C.K, Ramachandran, C, Kennedy, B.P, Asante-Appiah, E.
登録日2003-08-13
公開日2003-09-30
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The Structural Basis for the Selectivity of Benzotriazole Inhibitors of Ptp1B
Biochemistry, 42, 2003
1Q79
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CRYSTAL STRUCTURE OF MAMMALIAN POLY(A) POLYMERASE
分子名称: 3'-DEOXYADENOSINE-5'-TRIPHOSPHATE, GLYCEROL, MANGANESE (II) ION, ...
著者Martin, G, Moglich, A, Keller, W, Doublie, S.
登録日2003-08-16
公開日2004-09-07
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Biochemical and structural insights into substrate binding and catalytic mechanism of mammalian poly(A) polymerase.
J.Mol.Biol., 341, 2004
1Q9E
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BU of 1q9e by Molmil
RNase T1 variant with adenine specificity
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Guanyl-specific ribonuclease T1 precursor
著者Czaja, R, Struhalla, M, Hoeschler, K, Saenger, W, Straeter, N, Hahn, U.
登録日2003-08-25
公開日2004-03-23
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献RNase T1 Variant RV Cleaves Single-Stranded RNA after Purines Due to Specific Recognition by the Asn46 Side Chain Amide.
Biochemistry, 43, 2004
3DTX
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BU of 3dtx by Molmil
Crystal structure of HLA-B*2705 complexed with the double citrullinated vasoactive intestinal peptide type 1 receptor (VIPR) peptide (residues 400-408)
分子名称: Beta-2-microglobulin, Double citrullinated vasoactive intestinal polypeptide receptor, MHC class I antigen (Fragment)
著者Beltrami, A, Gabdulkhakov, A, Rossmann, M, Ziegler, A, Uchanska-Ziegler, B, Saenger, W.
登録日2008-07-16
公開日2009-05-05
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Citrullination-and mhc polymorphism-dependent conformational changes of a self peptide
To be Published
3DWD
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Crystal structure of the ArfGAP domain of human ARFGAP1
分子名称: ADP-ribosylation factor GTPase-activating protein 1, UNKNOWN ATOM OR ION, ZINC ION
著者Nedyalkova, L, Tong, Y, Tempel, W, Landry, R, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Wilkstrom, M, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
登録日2008-07-22
公開日2008-08-05
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of the ArfGAP domain of human ARFGAP1
To be Published
3GMA
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BU of 3gma by Molmil
Glutaconyl-coA decarboxylase A subunit from Clostridium symbiosum co-crystallized with glutaryl-CoA
分子名称: Glutaconyl-CoA decarboxylase subunit A, glutaryl-coenzyme A
著者Kress, D, Brugel, D, Buckel, W, Essen, L.-O.
登録日2009-03-13
公開日2009-07-28
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献An asymmetric model for Na+-translocating glutaconyl-CoA decarboxylases
J.Biol.Chem., 284, 2009
2GQ4
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Crystal structure of an RNA racemate
分子名称: CALCIUM ION, GLYCEROL, RNA (5'-R(*(0C)P*(0C)P*(0G)P*(0C)P*(0C)P*(0U)P*(0G)P*(0G))-3'), ...
著者Rypniewski, W, Vallazza, M, Perbandt, M, Klussmann, S, Betzel, C, Erdmann, V.A.
登録日2006-04-20
公開日2006-06-27
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献The first crystal structure of an RNA racemate.
Acta Crystallogr.,Sect.D, 62, 2006
3GOS
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The crystal structure of 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase from Yersinia pestis CO92
分子名称: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, MAGNESIUM ION
著者Zhang, R, Maltseva, N, Kwon, K, Anderson, W, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2009-03-19
公開日2009-05-12
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The crystal structure of 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase from Yersinia pestis CO92
To be Published
1QUS
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1.7 A RESOLUTION STRUCTURE OF THE SOLUBLE LYTIC TRANSGLYCOSYLASE SLT35 FROM ESCHERICHIA COLI
分子名称: 1,2-ETHANEDIOL, BICINE, LYTIC MUREIN TRANSGLYCOSYLASE B, ...
著者van Asselt, E.J, Dijkstra, A.J, Kalk, K.H, Takacs, B, Keck, W, Dijkstra, B.W.
登録日1999-07-03
公開日1999-09-15
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of Escherichia coli lytic transglycosylase Slt35 reveals a lysozyme-like catalytic domain with an EF-hand.
Structure Fold.Des., 7, 1999
3GR4
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Activator-Bound Structure of Human Pyruvate Kinase M2
分子名称: 1,6-di-O-phosphono-beta-D-fructofuranose, 1-[(2,6-difluorophenyl)sulfonyl]-4-(2,3-dihydro-1,4-benzodioxin-6-ylsulfonyl)piperazine, ADENOSINE-5'-DIPHOSPHATE, ...
著者Hong, B, Dimov, S, Tempel, W, Auld, D, Thomas, C, Boxer, M, Jianq, J.-K, Skoumbourdis, A, Min, S, Southall, N, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Bochkarev, A, Inglese, J, Park, H, Structural Genomics Consortium (SGC)
登録日2009-03-24
公開日2009-04-07
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Activator-Bound Structures of Human Pyruvate Kinase M2
to be published

222415

件を2024-07-10に公開中

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