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PDB: 34568 results

3HDH
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BU of 3hdh by Molmil
PIG HEART SHORT CHAIN L-3-HYDROXYACYL COA DEHYDROGENASE REVISITED: SEQUENCE ANALYSIS AND CRYSTAL STRUCTURE DETERMINATION
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, PROTEIN (L-3-HYDROXYACYL COA DEHYDROGENASE)
Authors:Barycki, J.J, O'Brien, L.K, Birktoft, J.J, Strauss, A.W, Banaszak, L.J.
Deposit date:1999-04-13
Release date:1999-10-08
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Pig heart short chain L-3-hydroxyacyl-CoA dehydrogenase revisited: sequence analysis and crystal structure determination.
Protein Sci., 8, 1999
8EZG
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BU of 8ezg by Molmil
Monobody 12D1 bound to KRAS(G12D)
Descriptor: GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Hattori, T, Glasser, E, Akkapeddi, P, Ketavarapu, G, Teng, K.W, Koide, A, Koide, S.
Deposit date:2022-10-31
Release date:2023-07-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:Exploring switch II pocket conformation of KRAS(G12D) with mutant-selective monobody inhibitors.
Proc.Natl.Acad.Sci.USA, 120, 2023
5AD3
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Bivalent binding to BET bromodomains
Descriptor: 3-methoxy-N-[2-[4-[1-(3-methoxy-[1,2,4]triazolo[4,3-b]pyridazin-6-yl)-4-piperidyl]phenoxy]ethyl]-N-methyl-[1,2,4]triazolo[4,3-b]pyridazin-6-amine, BROMODOMAIN-CONTAINING PROTEIN 4
Authors:Waring, M.J, Chen, H, Rabow, A.A, Walker, G, Bobby, R, Boiko, S, Bradbury, R.H, Callis, R, Dale, I, Daniels, D, Flavell, L, Holdgate, G, Jowitt, T.A, Kikhney, A, McAlister, M, Ogg, D, Patel, J, Petteruti, P, Robb, G.R, Robers, M, Stratton, N, Svergun, D.I, Wang, W, Whittaker, D.
Deposit date:2015-08-19
Release date:2016-09-28
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Potent and Selective Bivalent Inhibitors of Bet Bromodomains
Nat.Chem.Biol., 12, 2016
1E71
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MYROSINASE FROM SINAPIS ALBA with bound ascorbate
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ASCORBIC ACID, ...
Authors:Burmeister, W.P.
Deposit date:2000-08-23
Release date:2001-01-05
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:High Resolution X-Ray Crystallography Shows that Ascorbate is a Cofactor for Myrosinase and Substitutes for the Function of the Catalytic Base
J.Biol.Chem., 275, 2000
5ABD
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CRYSTAL STRUCTURE OF VEGFR-1 DOMAIN 2 IN PRESENCE OF CU
Descriptor: COPPER (II) ION, SODIUM ION, SULFATE ION, ...
Authors:Gaucher, J.-F, Lascombe, M.-B, Reille-Seroussi, M, Gagey-Eilstein, N, Broussy, S, Coric, P, Seijo, B, Gautier, B, Liu, W.-Q, Huguenot, F, Inguimbert, N, Bouaziz, S, Vidal, M, Broutin, I.
Deposit date:2015-08-05
Release date:2016-09-28
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.995 Å)
Cite:Biophysical Studies of the Induced Dimerization of Human Vegf R Receptor 1 Binding Domain by Divalent Metals Competing with Vegf-A
Plos One, 11, 2016
7Q18
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Beta-lactoglobulin mutant FAF (I56F/L39A/M107F), unliganded form
Descriptor: Beta-lactoglobulin, SULFATE ION
Authors:Loch, J.I, Cymborowski, M.T, Minor, W, Lewinski, K.
Deposit date:2021-10-18
Release date:2022-05-11
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.804 Å)
Cite:New ligand-binding sites identified in the crystal structures of [beta]-lactoglobulin complexes with desipramine
Iucrj, 9, 2022
1EN4
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BU of 1en4 by Molmil
CRYSTAL STRUCTURE ANALYSIS OF THE E. COLI MANGANESE SUPEROXIDE DISMUTASE Q146H MUTANT
Descriptor: MANGANESE (II) ION, MANGANESE SUPEROXIDE DISMUTASE
Authors:Edwards, R.A, Whittaker, M.M, Baker, E.N, Whittaker, J.W, Jameson, G.B.
Deposit date:2000-03-20
Release date:2001-06-27
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Outer sphere mutations perturb metal reactivity in manganese superoxide dismutase.
Biochemistry, 40, 2001
3E50
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Crystal structure of human insulin degrading enzyme in complex with transforming growth factor-alpha
Descriptor: Insulin-degrading enzyme, Protransforming growth factor alpha, ZINC ION
Authors:Guo, Q, Manolopoulou, M, Tang, W.-J.
Deposit date:2008-08-12
Release date:2009-08-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Molecular Basis for the Recognition and Cleavages of IGF-II, TGF-alpha, and Amylin by Human Insulin-Degrading Enzyme.
J.Mol.Biol., 395, 2010
2ZBJ
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BU of 2zbj by Molmil
Crystal structure of Dioclea rostrata lectin
Descriptor: CALCIUM ION, Lectin alpha chain, MANGANESE (II) ION, ...
Authors:de Oliveira, T.M, Delatorre, P, da Rocha, B.A.M, de Sousa, E.P, Nascimento, K.S, Bezerra, G.A, Moura, T.R, Benevides, R.G, Bezerra, E.H.S, Moreno, F.B.M.B, Freire, V.N, de Azevedo Jr, W.F, Cavada, B.S.
Deposit date:2007-10-22
Release date:2008-08-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structure of Dioclea rostrata lectin: Insights into understanding the pH-dependent dimer-tetramer equilibrium and the structural basis for carbohydrate recognition in Diocleinae lectins
J.Struct.Biol., 164, 2008
8F5C
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BU of 8f5c by Molmil
Mirror-image DNA containing 2'-OMe-L-dC modification
Descriptor: DNA (5'-D(*(0DG))-R(P*(XE6))-D(P*(0DG)P*(0DT)P*(0DA)P*(0DC)P*(0DG)P*(0DC))-3'), MAGNESIUM ION
Authors:Zhang, W, Dantsu, Y.
Deposit date:2022-11-13
Release date:2023-09-20
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Synthesis and Structural Characterization of 2'-Deoxy-2'-Methoxy-L-Cytidine Nucleic Acids
Chemistryselect, 2023
6UBL
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BU of 6ubl by Molmil
Structure of DynF from the Dynemicin Biosynthesis Pathway of Micromonospora chersina
Descriptor: DynF, PALMITIC ACID
Authors:Kosgei, A.J, Miller, M.D, Xu, W, Bhardwaj, M, Van Lanen, S.G, Thorson, J.S, Phillips Jr, G.N.
Deposit date:2019-09-12
Release date:2020-09-16
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.499 Å)
Cite:The crystal structure of DynF from the dynemicin-biosynthesis pathway of Micromonospora chersina.
Acta Crystallogr.,Sect.F, 78, 2022
8ELZ
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BU of 8elz by Molmil
HRAS R97M Crystal Form 1
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, CALCIUM ION, GTPase HRas, ...
Authors:Johnson, C.W, Mattos, C.
Deposit date:2022-09-26
Release date:2023-09-06
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.961 Å)
Cite:Allosteric site variants affect GTP hydrolysis on Ras.
Protein Sci., 32, 2023
8ELS
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BU of 8els by Molmil
HRAS R97A Crystal Form 1 R-state
Descriptor: CALCIUM ION, GTPase HRas, MAGNESIUM ION, ...
Authors:Davis, D, Johnson, C.W, Mattos, C.
Deposit date:2022-09-26
Release date:2023-09-06
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.267 Å)
Cite:Allosteric site variants affect GTP hydrolysis on Ras.
Protein Sci., 32, 2023
7VIJ
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BU of 7vij by Molmil
Crystal structure of USP7-HUBL domain
Descriptor: Ubiquitin carboxyl-terminal hydrolase 7
Authors:Feng, N, Zeng, K.W.
Deposit date:2021-09-27
Release date:2022-08-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Neuroinflammation inhibition by small-molecule targeting USP7 noncatalytic domain for neurodegenerative disease therapy.
Sci Adv, 8, 2022
7K1D
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Crystal structure of human insulin degrading enzyme (IDE) in complex with compound BDM_77291
Descriptor: (3R)-3-{4-[(3R)-4-(3,4-difluorobenzene-1-carbonyl)morpholin-3-yl]-1H-1,2,3-triazol-1-yl}-N-hydroxy-4-(naphthalen-2-yl)butanamide, 1,4-DIETHYLENE DIOXIDE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Liang, W.G, Deprez, R, Bosc, D, Tang, W.
Deposit date:2020-09-07
Release date:2021-09-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of human insulin degrading enzyme (IDE) in complex with compound 2
To Be Published
7K1F
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Crystal structure of human insulin degrading enzyme (IDE) in complex with compound BDM_88558
Descriptor: 1,4-DIETHYLENE DIOXIDE, 3,4-difluoro-N-({1-[(2R)-4-(hydroxyamino)-4-oxo-1-(quinolin-7-yl)butan-2-yl]-1H-1,2,3-triazol-4-yl}methyl)benzamide, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Liang, W.G, Deprez, R, Bosc, D, Tang, W.
Deposit date:2020-09-07
Release date:2021-09-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of human insulin degrading enzyme (IDE) in complex with compound 4
To Be Published
5A4A
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BU of 5a4a by Molmil
Crystal structure of the OSK domain of Drosophila Oskar
Descriptor: MATERNAL EFFECT PROTEIN OSKAR, SULFATE ION
Authors:Jeske, M, Glatt, S, Ephrussi, A, Mueller, C.W.
Deposit date:2015-06-05
Release date:2015-07-22
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.699 Å)
Cite:The Crystal Structure of the Drosophila Germline Inducer Oskar Identifies Two Domains with Distinct Vasa Helicase-and RNA-Binding Activities.
Cell Rep., 12, 2015
7K1E
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BU of 7k1e by Molmil
Crystal structure of human insulin degrading enzyme (IDE) in complex with compound BDM_88646
Descriptor: 1,4-DIETHYLENE DIOXIDE, 3,4-difluoro-N-[(1S)-1-{1-[(2R)-4-(hydroxyamino)-4-oxo-1-(5,6,7,8-tetrahydronaphthalen-2-yl)butan-2-yl]-1H-1,2,3-triazol-4-yl}ethyl]benzamide, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Liang, W.G, Deprez, R, Bosc, D, Tang, W.
Deposit date:2020-09-07
Release date:2021-09-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of human insulin degrading enzyme (IDE) in complex with compound 3
To Be Published
8SVC
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BU of 8svc by Molmil
Crystal Structure of SBP from Klebsiella pneumoniae
Descriptor: Metal ABC transporter substrate-binding protein, SULFATE ION, ZINC ION
Authors:Giles, M.W, Cole, G.B, Ng, D, McDevitt, C.A, Moraes, T.F.
Deposit date:2023-05-16
Release date:2024-01-24
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Zinc acquisition and its contribution to Klebsiella pneumoniae virulence.
Front Cell Infect Microbiol, 13, 2023
5AIM
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BU of 5aim by Molmil
Crystal structure of T138 central eWH domain
Descriptor: GLYCEROL, TRANSCRIPTION FACTOR TAU 138 KDA SUBUNIT
Authors:Male, G, Glatt, S, Mueller, C.W.
Deposit date:2015-02-16
Release date:2015-06-24
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.401 Å)
Cite:Architecture of TFIIIC and its role in RNA polymerase III pre-initiation complex assembly.
Nat Commun, 6, 2015
1EL0
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BU of 1el0 by Molmil
SOLUTION STRUCTURE OF THE HUMAN CC CHEMOKINE, I-309
Descriptor: I-309
Authors:Keizer, D.W, Crump, M.P, Lee, T.W, Slupsky, C.M, Clark-Lewis, I, Sykes, B.D.
Deposit date:2000-03-11
Release date:2000-09-01
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Human CC chemokine I-309, structural consequences of the additional disulfide bond.
Biochemistry, 39, 2000
3ETW
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BU of 3etw by Molmil
Crystal Structure of bacterial adhesin FadA
Descriptor: Adhesin A, THIOCYANATE ION
Authors:Nithianantham, S, Xu, M, Wu, N, Shoham, M, Han, Y.W.
Deposit date:2008-10-08
Release date:2008-12-02
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of FadA Adhesin from Fusobacterium nucleatum Reveals a Novel Oligomerization Motif, the Leucine Chain.
J.Biol.Chem., 284, 2009
1IGZ
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BU of 1igz by Molmil
Crystal Structure of Linoleic acid Bound in the Cyclooxygenase Channel of Prostaglandin Endoperoxide H Synthase-1.
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, LINOLEIC ACID, ...
Authors:Malkowski, M.G, Thuresson, E.D, Smith, W.L, Garavito, R.M.
Deposit date:2001-04-18
Release date:2001-12-12
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of eicosapentaenoic and linoleic acids in the cyclooxygenase site of prostaglandin endoperoxide H synthase-1.
J.Biol.Chem., 276, 2001
3EU5
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BU of 3eu5 by Molmil
Crystal structure of FTase(ALPHA-subunit; BETA-subunit DELTA C10) in complex with BiotinGPP
Descriptor: (2E,6E)-3,7-dimethyl-8-({5-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanoyl}amino)octa-2,6-dien-1-yl trihydrogen diphosphate, Protein farnesyltransferase subunit beta, Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha, ...
Authors:Guo, Z, Nguyen, U.T.T, Delon, C, Bon, R.S, Blankenfeldt, W, Goody, R.S, Waldmann, H, Wolters, D, Alexandrov, K.
Deposit date:2008-10-09
Release date:2009-07-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Analysis of the eukaryotic prenylome by isoprenoid affinity tagging
Nat.Chem.Biol., 5, 2009
3HT5
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BU of 3ht5 by Molmil
Crystal Structure of IlvE a Branched Chain Amino Acid Transaminase from Mycobacterium tuberculosis
Descriptor: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, branched-chain-amino-acid aminotransferase
Authors:Tremblay, L.W, Blanchard, J.S.
Deposit date:2009-06-11
Release date:2009-12-01
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The 1.9 A structure of the branched-chain amino-acid transaminase (IlvE) from Mycobacterium tuberculosis.
Acta Crystallogr.,Sect.F, 65, 2009

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