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PDB: 34568 results

1LI2
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T4 Lysozyme Mutant L99A/M102Q Bound by Phenol
Descriptor: BETA-MERCAPTOETHANOL, CHLORIDE ION, Lysozyme, ...
Authors:Wei, B.Q, Baase, W.A, Weaver, L.H, Matthews, B.W, Shoichet, B.K.
Deposit date:2002-04-17
Release date:2002-05-08
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:A Model Binding Site for Testing Scoring Functions in Molecular Docking
J.Mol.Biol., 322, 2002
1LLF
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Cholesterol Esterase (Candida Cylindracea) Crystal Structure at 1.4A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Lipase 3, TRICOSANOIC ACID
Authors:Pletnev, V, Addlagatta, A, Wawrzak, Z, Duax, W.
Deposit date:2002-04-28
Release date:2003-01-07
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Three-dimensional structure of homodimeric cholesterol esterase-ligand complex at 1.4 A resolution.
Acta Crystallogr.,Sect.D, 59, 2003
2EU7
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Crystal structure of D1A mutant of nitrophorin 2 complexed with ammonia
Descriptor: AMMONIA, Nitrophorin 2, PROTOPORPHYRIN IX CONTAINING FE
Authors:Weichsel, A, Montfort, W.R.
Deposit date:2005-10-28
Release date:2006-10-10
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Crystal structures, ligand induced conformational change and heme deformation in complexes of nitrophorin 2, a nitric oxide transport protein from rhodnius prolixus
To be Published
2HL8
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SUMO protease Ulp1 with the catalytic cysteine oxidized to a sulfinic acid
Descriptor: Ubiquitin-like-specific protease 1
Authors:Xu, Z, Ng, T.B, Au, S.W.N.
Deposit date:2006-07-06
Release date:2007-07-31
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Molecular basis of the redox regulation of SUMO proteases: a protective mechanism of intermolecular disulfide linkage against irreversible sulfhydryl oxidation
Faseb J., 22, 2008
1DPB
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CRYSTALLOGRAPHIC AND ENZYMATIC INVESTIGATIONS ON THE ROLE OF SER558, HIS610 AND ASN614 IN THE CATALYTIC MECHANISM OF AZOTOBACTER VINELANDII DIHYDROLIPOAMIDE ACETYLTRANSFERASE (E2P)
Descriptor: DIHYDROLIPOYL-TRANSACETYLASE
Authors:Hendle, J, Hol, W.G.J.
Deposit date:1995-02-03
Release date:1995-04-20
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystallographic and enzymatic investigations on the role of Ser558, His610, and Asn614 in the catalytic mechanism of Azotobacter vinelandii dihydrolipoamide acetyltransferase (E2p).
Biochemistry, 34, 1995
4FBH
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Structure of RIP from barley seeds
Descriptor: ADENOSINE MONOPHOSPHATE, Protein synthesis inhibitor I
Authors:Lee, B.-G, Kim, M.K, Suh, S.W, Song, H.K.
Deposit date:2012-05-23
Release date:2012-10-31
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of the ribosome-inactivating protein from barley seeds reveal a unique activation mechanism.
Acta Crystallogr.,Sect.D, 68, 2012
4FBC
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Structure of mutant RIP from barley seeds in complex with AMP
Descriptor: ADENOSINE MONOPHOSPHATE, Protein synthesis inhibitor I
Authors:Lee, B.-G, Kim, M.K, Suh, S.W, Song, H.K.
Deposit date:2012-05-22
Release date:2012-10-31
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structures of the ribosome-inactivating protein from barley seeds reveal a unique activation mechanism.
Acta Crystallogr.,Sect.D, 68, 2012
3R1G
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Structure Basis of Allosteric Inhibition of BACE1 by an Exosite-Binding Antibody
Descriptor: Beta-secretase 1, FAB of YW412.8.31 antibody heavy chain, FAB of YW412.8.31 antibody light chain
Authors:Wang, W, Rouge, L, Wu, P, Chiu, C, Chen, Y, Wu, Y, Watts, R.J.
Deposit date:2011-03-10
Release date:2011-06-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:A Therapeutic Antibody Targeting BACE1 Inhibits Amyloid-{beta} Production in Vivo.
Sci Transl Med, 3, 2011
2HOX
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alliinase from allium sativum (garlic)
Descriptor: 2-[({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)AMINO]ACRYLIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Shimon, L.J.W, Rabinkov, A, Wilcheck, M, Mirelman, D, Frolow, F.
Deposit date:2006-07-17
Release date:2007-02-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Two Structures of Alliinase from Alliium sativum L.: Apo Form and Ternary Complex with Aminoacrylate Reaction Intermediate Covalently Bound to the PLP Cofactor.
J.Mol.Biol., 366, 2007
1DP7
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COCRYSTAL STRUCTURE OF RFX-DBD IN COMPLEX WITH ITS COGNATE X-BOX BINDING SITE
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, DNA (5'-D(*CP*GP*(BRU)P*TP*AP*CP*CP*AP*(BRU)P*GP*GP*TP*AP*AP*CP*G)-3'), ...
Authors:Gajiwala, K.S, Chen, H, Cornille, F, Roques, B.P, Reith, W, Mach, B, Burley, S.K.
Deposit date:1999-12-23
Release date:2000-03-06
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure of the winged-helix protein hRFX1 reveals a new mode of DNA binding.
Nature, 403, 2000
2A5D
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Structural basis for the activation of cholera toxin by human ARF6-GTP
Descriptor: ADP-ribosylation factor 6, Cholera enterotoxin, A chain, ...
Authors:O'Neal, C.J, Jobling, M.G, Holmes, R.K, Hol, W.G.J.
Deposit date:2005-06-30
Release date:2005-08-16
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for the activation of cholera toxin by human ARF6-GTP.
Science, 309, 2005
1LAY
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CRYSTAL STRUCTURE OF CYTOMEGALOVIRUS PROTEASE
Descriptor: CYTOMEGALOVIRUS PROTEASE
Authors:Qiu, X, Culp, J.S, Dilella, A.G, Hellmig, B, Hoog, S.S, Jason, C.A, Smith, W.W, Abdel-Meguid, S.S.
Deposit date:1996-07-16
Release date:1997-09-26
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Unique fold and active site in cytomegalovirus protease.
Nature, 383, 1996
2A3L
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X-Ray Structure of Adenosine 5'-Monophosphate Deaminase from Arabidopsis Thaliana in Complex with Coformycin 5'-Phosphate
Descriptor: AMP deaminase, COFORMYCIN 5'-PHOSPHATE, PHOSPHATE ION, ...
Authors:Han, B.W, Wesenberg, G.E, Phillips Jr, G.N, Bitto, E, Bingman, C.A, Allard, S.T.M, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2005-06-25
Release date:2005-07-19
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.34 Å)
Cite:Membrane association, mechanism of action, and structure of Arabidopsis embryonic factor 1 (FAC1).
J.Biol.Chem., 281, 2006
1H48
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The structure of 2C-Methyl-D-erythritol 2,4-cyclodiphosphate synthase in complex with CMP and product
Descriptor: 2C-METHYL-D-ERYTHRITOL 2,4-CYCLODIPHOSPHATE, 2C-METHYL-D-ERYTHRITOL-2,4-CYCLODIPHOSPHATE SYNTHASE, CYTIDINE-5'-MONOPHOSPHATE, ...
Authors:Kemp, L.E, Alphey, M.S, Bond, C.S, Hunter, W.N.
Deposit date:2003-02-24
Release date:2004-12-22
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The Identification of Isoprenoids that Bind in the Intersubunit Cavity of Escherichia Coli 2C-Methyl-D-Erythritol-2,4-Cyclodiphosphate Synthase by Complementary Biophysical Methods
Acta Crystallogr.,Sect.D, 61, 2005
2A5G
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Cholera toxin A1 subunit bound to ARF6(Q67L)
Descriptor: ADP-ribosylation factor 6, Cholera enterotoxin, A chain, ...
Authors:O'Neal, C.J, Jobling, M.G, Holmes, R.K, Hol, W.G.J.
Deposit date:2005-06-30
Release date:2005-08-16
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:Structural basis for the activation of cholera toxin by human ARF6-GTP.
Science, 309, 2005
1LIA
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BU of 1lia by Molmil
CRYSTAL STRUCTURE OF R-PHYCOERYTHRIN FROM POLYSIPHONIA AT 2.8 A RESOLUTION
Descriptor: PHYCOCYANOBILIN, PHYCOUROBILIN, R-PHYCOERYTHRIN
Authors:Liang, D.C, Jiang, T, Chang, W.R.
Deposit date:1996-01-29
Release date:1997-07-29
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of R-phycoerythrin from Polysiphonia urceolata at 2.8 A resolution.
J.Mol.Biol., 262, 1996
1GZG
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Complex of a Mg2-dependent porphobilinogen synthase from Pseudomonas aeruginosa (mutant D139N) with 5-fluorolevulinic acid
Descriptor: 5-FLUOROLEVULINIC ACID, DELTA-AMINOLEVULINIC ACID DEHYDRATASE, MAGNESIUM ION, ...
Authors:Frere, F, Schubert, W.-D, Stauffer, F, Frankenberg, N, Neier, R, Jahn, D, Heinz, D.W.
Deposit date:2002-05-21
Release date:2002-06-27
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Structure of porphobilinogen synthase from Pseudomonas aeruginosa in complex with 5-fluorolevulinic acid suggests a double Schiff base mechanism.
J. Mol. Biol., 320, 2002
2A3F
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Crystal structure of nitrophorin 2 aqua complex
Descriptor: Nitrophorin 2, PROTOPORPHYRIN IX CONTAINING FE
Authors:Weichsel, A, Berry, R.E, Walker, F.A, Montfort, W.R.
Deposit date:2005-06-24
Release date:2006-06-06
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structures, ligand induced conformational change and heme deformation in complexes of nitrophorin 2, a nitric oxide transport protein from rhodnius prolixus.
To be Published
1M73
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CRYSTAL STRUCTURE OF HUMAN PNP AT 2.3A RESOLUTION
Descriptor: PURINE NUCLEOSIDE PHOSPHORYLASE, SULFATE ION
Authors:De Azevedo Jr, W.F, Marangoni Dos Santos, D, Canduri, F, Santos, G.C, Olivieri, J.R, Silva, R.G, Basso, L.A, Palma, M.S, Santos, D.S.
Deposit date:2002-07-18
Release date:2003-09-16
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of human purine nucleoside phosphorylase at 2.3A resolution.
Biochem.Biophys.Res.Commun., 308, 2003
2FDH
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Crystal Structure of AlkB in complex with Mn(II), 2-oxoglutarate, and methylated trinucleotide T-meA-T
Descriptor: 2-OXOGLUTARIC ACID, 5'-D(P*TP*(MA7)P*T)-3', Alkylated DNA repair protein alkB, ...
Authors:Yu, B, Benach, J, Edstrom, W.C, Gibney, B.R, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2005-12-14
Release date:2006-02-21
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structures of catalytic complexes of the oxidative DNA/RNA repair enzyme AlkB.
Nature, 439, 2006
1H59
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Complex of IGFBP-5 with IGF-I
Descriptor: INSULIN-LIKE GROWTH FACTOR BINDING PROTEIN 5, INSULIN-LIKE GROWTH FACTOR IA
Authors:Zeslawski, W, Beisel, H.G, Kamionka, M, Kalus, W, Engh, R.A, Huber, R, Holak, T.A.
Deposit date:2001-05-21
Release date:2002-05-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The Interaction of Insulin-Like Growth Factor-I with the N-Terminal Domain of Igfbp-5
Embo J., 20, 2001
1HFP
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COMPARISON OF TERNARY CRYSTAL COMPLEXES OF HUMAN DIHYDROFOLATE REDUCTASE WITH NADPH AND A CLASSICAL ANTITUMOR FUROPYRIMDINE
Descriptor: DIHYDROFOLATE REDUCTASE, N-[4-[(2,4-DIAMINOFURO[2,3D]PYRIMIDIN-5-YL)METHYL]METHYLAMINO]-BENZOYL]-L-GLUTAMATE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Cody, V, Galitsky, N, Luft, J.R, Pangborn, W, Blakley, R.L, Gangjee, A.
Deposit date:1997-11-04
Release date:1998-01-28
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Comparison of ternary crystal complexes of F31 variants of human dihydrofolate reductase with NADPH and a classical antitumor furopyrimidine.
Anti-Cancer Drug Des., 13, 1998
1HDE
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HALOALKANE DEHALOGENASE MUTANT WITH PHE 172 REPLACED WITH TRP
Descriptor: HALOALKANE DEHALOGENASE
Authors:Ridder, I.S, Kalk, K.H, Dijkstra, B.W.
Deposit date:1996-08-08
Release date:1997-02-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Kinetic characterization and X-ray structure of a mutant of haloalkane dehalogenase with higher catalytic activity and modified substrate range.
Biochemistry, 35, 1996
1HFQ
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COMPARISON OF TERNARY CRYSTAL COMPLEXES OF HUMAN DIHYDROFOLATE REDUCTASE WITH NADPH AND A CLASSICAL ANTITUMOR FUROPYRIMDINE
Descriptor: DIHYDROFOLATE REDUCTASE, N-[4-[(2,4-DIAMINOFURO[2,3D]PYRIMIDIN-5-YL)METHYL]METHYLAMINO]-BENZOYL]-L-GLUTAMATE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Cody, V, Galitsky, N, Luft, J.R, Pangborn, W, Blakley, R.L, Gangjee, A.
Deposit date:1997-11-04
Release date:1998-01-28
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Comparison of ternary crystal complexes of F31 variants of human dihydrofolate reductase with NADPH and a classical antitumor furopyrimidine.
Anti-Cancer Drug Des., 13, 1998
2D7C
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Crystal structure of human Rab11 in complex with FIP3 Rab-binding domain
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Shiba, T, Koga, H, Shin, H.W, Kawasaki, M, Kato, R, Nakayama, K, Wakatsuki, S.
Deposit date:2005-11-16
Release date:2006-09-26
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural basis for Rab11-dependent membrane recruitment of a family of Rab11-interacting protein 3 (FIP3)/Arfophilin-1.
Proc.Natl.Acad.Sci.Usa, 103, 2006

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