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PDB: 23 results

1UMT
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BU of 1umt by Molmil
Stromelysin-1 catalytic domain with hydrophobic inhibitor bound, ph 7.0, 32oc, 20 mm cacl2, 15% acetonitrile; nmr average of 20 structures minimized with restraints
Descriptor: CALCIUM ION, N-{(2R)-2-[2-(hydroxyamino)-2-oxoethyl]-4-methylpentanoyl}-L-leucyl-L-phenylalaninamide, STROMELYSIN-1, ...
Authors:Van Doren, S.R, Kurochkin, A.V, Hu, W, Zuiderweg, E.R.P.
Deposit date:1995-10-31
Release date:1996-03-08
Last modified:2012-12-12
Method:SOLUTION NMR
Cite:Solution structure of the catalytic domain of human stromelysin complexed with a hydrophobic inhibitor.
Protein Sci., 4, 1995
1UMS
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STROMELYSIN-1 CATALYTIC DOMAIN WITH HYDROPHOBIC INHIBITOR BOUND, PH 7.0, 32OC, 20 MM CACL2, 15% ACETONITRILE; NMR ENSEMBLE OF 20 STRUCTURES
Descriptor: CALCIUM ION, N-{(2R)-2-[2-(hydroxyamino)-2-oxoethyl]-4-methylpentanoyl}-L-leucyl-L-phenylalaninamide, STROMELYSIN-1, ...
Authors:Van Doren, S.R, Kurochkin, A.V, Hu, W, Zuiderweg, E.R.P.
Deposit date:1995-10-31
Release date:1996-03-08
Last modified:2020-09-23
Method:SOLUTION NMR
Cite:Solution structure of the catalytic domain of human stromelysin complexed with a hydrophobic inhibitor.
Protein Sci., 4, 1995
5UE2
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proMMP-7 with heparin octasaccharide bridging between domains
Descriptor: 2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose, CALCIUM ION, Matrilysin, ...
Authors:Fulcher, Y.G, Prior, S.H, Linhardt, R.J, Van Doren, S.R.
Deposit date:2016-12-29
Release date:2017-07-19
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Glycan Activation of a Sheddase: Electrostatic Recognition between Heparin and proMMP-7.
Structure, 25, 2017
5UE5
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proMMP-7 with heparin octasaccharide bound to the catalytic domain
Descriptor: 2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose, CALCIUM ION, Matrilysin, ...
Authors:Fulcher, Y.G, Prior, S.H, Linhardt, R.J, Van Doren, S.R.
Deposit date:2016-12-29
Release date:2017-07-19
Last modified:2020-07-29
Method:SOLUTION NMR
Cite:Glycan Activation of a Sheddase: Electrostatic Recognition between Heparin and proMMP-7.
Structure, 25, 2017
7MY8
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BU of 7my8 by Molmil
Fusion Peptide of SARS-CoV-2 Spike Rearranges into a Wedge Inserted in Bilayered Micelles
Descriptor: Spike protein S2
Authors:Koppisetti, R.K, Fulcher, Y.G, Van Doren, S.R.
Deposit date:2021-05-20
Release date:2021-08-18
Last modified:2021-09-08
Method:SOLUTION NMR
Cite:Fusion Peptide of SARS-CoV-2 Spike Rearranges into a Wedge Inserted in Bilayered Micelles.
J.Am.Chem.Soc., 143, 2021
3RSM
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BU of 3rsm by Molmil
Crystal structure of S108C mutant of PMM/PGM
Descriptor: PHOSPHATE ION, Phosphomannomutase/phosphoglucomutase, ZINC ION
Authors:Akella, A, Anbanandam, A, Kelm, A, Wei, Y, Mehra-Chaudhary, R, Beamer, L, Van Doren, S.
Deposit date:2011-05-02
Release date:2012-02-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Solution NMR of a 463-residue phosphohexomutase: domain 4 mobility, substates, and phosphoryl transfer defect.
Biochemistry, 51, 2012
1D2B
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BU of 1d2b by Molmil
THE MMP-INHIBITORY, N-TERMINAL DOMAIN OF HUMAN TISSUE INHIBITOR OF METALLOPROTEINASES-1 (N-TIMP-1), SOLUTION NMR, 29 STRUCTURES
Descriptor: Metalloproteinase inhibitor 1
Authors:Wu, B, Arumugam, S, Semenchenko, V, Brew, K, Van Doren, S.R.
Deposit date:1999-09-22
Release date:1999-12-22
Last modified:2022-03-23
Method:SOLUTION NMR
Cite:NMR structure of tissue inhibitor of metalloproteinases-1 implicates localized induced fit in recognition of matrix metalloproteinases.
J.Mol.Biol., 295, 2000
1NC0
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BU of 1nc0 by Molmil
U80G U6 Intramolecular Stem-Loop RNA from Saccharomyces cerevisiae
Descriptor: U80G U6 RNA Intramolecular Stem-Loop
Authors:Sashital, D.G, Allmann, A.M, Van Doren, S, Butcher, S.E.
Deposit date:2002-12-04
Release date:2003-02-25
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Structural Basis for a Lethal Mutation in U6 RNA
Biochemistry, 42, 2003
6CM1
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BU of 6cm1 by Molmil
MT1-MMP HPX Domain with Blade 2 Loop Bound to Nanodiscs
Descriptor: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Apolipoprotein A-I, CHLORIDE ION, ...
Authors:Marcink, T.C, Van Doren, S.R.
Deposit date:2018-03-02
Release date:2018-12-12
Last modified:2019-12-18
Method:SOLUTION NMR
Cite:MT1-MMP Binds Membranes by Opposite Tips of Its beta Propeller to Position It for Pericellular Proteolysis.
Structure, 27, 2019
6CLZ
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BU of 6clz by Molmil
MT1-MMP HPX domain with Blade 4 Loop Bound to Nanodiscs
Descriptor: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Apolipoprotein A-I, CHLORIDE ION, ...
Authors:Marcink, T.C, Van Doren, S.R.
Deposit date:2018-03-02
Release date:2018-12-12
Last modified:2019-12-04
Method:SOLUTION NMR
Cite:MT1-MMP Binds Membranes by Opposite Tips of Its beta Propeller to Position It for Pericellular Proteolysis.
Structure, 27, 2019
2N8R
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BU of 2n8r by Molmil
Productive complex between MMP-12 and synthetic triple-helical collagen, revealed through paramagnetic NMR
Descriptor: CALCIUM ION, Collagen triple helix repeat family protein, Macrophage metalloelastase, ...
Authors:Prior, S.H, Van Doren, S.R.
Deposit date:2015-10-24
Release date:2016-02-24
Last modified:2016-04-27
Method:SOLUTION NMR
Cite:Path to Collagenolysis: COLLAGEN V TRIPLE-HELIX MODEL BOUND PRODUCTIVELY AND IN ENCOUNTERS BY MATRIX METALLOPROTEINASE-12.
J.Biol.Chem., 291, 2016
1JP0
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BU of 1jp0 by Molmil
NMR Structure of the LP5.1 Hairpin from Bacillus RNase P RNA Refined WITHOUT Residual Dipolar Couplings
Descriptor: 5'-R(*GP*GP*CP*GP*GP*UP*GP*CP*UP*GP*AP*GP*AP*UP*GP*CP*CP*CP*GP*UP*C)-3'
Authors:Leeper, T.C, Schmidt, F.J, Van Doren, S.R.
Deposit date:2001-07-31
Release date:2002-05-01
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Structure of the UGAGAU hexaloop that braces Bacillus RNase P for action.
Nat.Struct.Biol., 9, 2002
1JOX
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BU of 1jox by Molmil
NMR Structure of the LP5.1 Hairpin from Bacillus RNase P RNA Refined with Residual Dipolar Couplings
Descriptor: 5'-R(*GP*GP*CP*GP*GP*UP*GP*CP*UP*GP*AP*GP*AP*UP*GP*CP*CP*CP*GP*UP*C)-3'
Authors:Leeper, T.C, Schmidt, F.J, Van Doren, S.R.
Deposit date:2001-07-31
Release date:2002-05-01
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Structure of the UGAGAU hexaloop that braces Bacillus RNase P for action.
Nat.Struct.Biol., 9, 2002
1FAF
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BU of 1faf by Molmil
NMR STRUCTURE OF THE N-TERMINAL J DOMAIN OF MURINE POLYOMAVIRUS T ANTIGENS.
Descriptor: LARGE T ANTIGEN
Authors:Berjanskii, M.V, Riley, M.I, Xie, A, Semenchenko, V, Folk, W.R, Van Doren, S.R.
Deposit date:2000-07-13
Release date:2000-11-22
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:NMR structure of the N-terminal J domain of murine polyomavirus T antigens. Implications for DnaJ-like domains and for mutations of T antigens.
J.Biol.Chem., 275, 2000
1OO9
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BU of 1oo9 by Molmil
Orientation in Solution of MMP-3 Catalytic Domain and N-TIMP-1 from Residual Dipolar Couplings
Descriptor: Metalloproteinase inhibitor 1, Stromelysin-1
Authors:Arumugam, S, Van Doren, S.R.
Deposit date:2003-03-03
Release date:2003-07-29
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Global Orientation of Bound MMP-3 and N-TIMP-1 in Solution via Residual Dipolar Couplings
Biochemistry, 42, 2003
1MZK
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BU of 1mzk by Molmil
NMR structure of kinase-interacting FHA domain of kinase associated protein phosphatase, KAPP in Arabidopsis
Descriptor: KINASE ASSOCIATED PROTEIN PHOSPHATASE
Authors:Lee, G, Ding, Z, Walker, J.C, Van Doren, S.R.
Deposit date:2002-10-08
Release date:2003-09-09
Last modified:2022-12-21
Method:SOLUTION NMR
Cite:NMR Structure of the forkhead-associated domain from the Arabidopsis receptor kinase-associated protein phosphatase.
Proc.Natl.Acad.Sci.USA, 100, 2003
2MZI
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BU of 2mzi by Molmil
NMR Solution Structure of the PRO Form of Human Matrilysin (proMMP-7) in Complex with Anionic Membrane
Descriptor: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CALCIUM ION, CHOLEST-5-EN-3-YL HYDROGEN SULFATE, ...
Authors:Prior, S.H, Van Doren, S.R.
Deposit date:2015-02-12
Release date:2016-09-28
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Charge-Triggered Membrane Insertion of Matrix Metalloproteinase-7, Supporter of Innate Immunity and Tumors.
Structure, 23, 2015
2MZH
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BU of 2mzh by Molmil
NMR Solution Structure of the PRO Form of Human Matrilysin (proMMP-7) in Complex with Zwitterionic Membrane
Descriptor: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CALCIUM ION, Matrilysin, ...
Authors:Prior, S.H, Van Doren, S.R.
Deposit date:2015-02-12
Release date:2015-11-18
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Charge-Triggered Membrane Insertion of Matrix Metalloproteinase-7, Supporter of Innate Immunity and Tumors.
Structure, 23, 2015
2MLS
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BU of 2mls by Molmil
Membrane Bilayer complex with Matrix Metalloproteinase-12 at its Beta-face
Descriptor: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CALCIUM ION, Macrophage metalloelastase, ...
Authors:Koppisetti, R.K, Fulcher, Y.G, Prior, S.H, Lenoir, M, Overduin, M, Van Doren, S.R.
Deposit date:2014-03-04
Release date:2014-12-03
Last modified:2014-12-10
Method:SOLUTION NMR
Cite:Ambidextrous binding of cell and membrane bilayers by soluble matrix metalloproteinase-12.
Nat Commun, 5, 2014
2MLR
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BU of 2mlr by Molmil
Membrane Bilayer complex with Matrix Metalloproteinase-12 at its Alpha-face
Descriptor: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CALCIUM ION, Macrophage metalloelastase, ...
Authors:Koppisetti, R.K, Fulcher, Y.G, Prior, S.H, Lenoir, M, Overduin, M, Van Doren, S.R.
Deposit date:2014-03-04
Release date:2014-12-03
Last modified:2014-12-10
Method:SOLUTION NMR
Cite:Ambidextrous binding of cell and membrane bilayers by soluble matrix metalloproteinase-12.
Nat Commun, 5, 2014
2MZE
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BU of 2mze by Molmil
NMR Solution Structure of the PRO Form of Human Matrilysin (proMMP-7)
Descriptor: CALCIUM ION, Matrilysin, ZINC ION
Authors:Prior, S.H, Fulcher, Y.G, Van Doren, S.R.
Deposit date:2015-02-11
Release date:2015-11-11
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Charge-Triggered Membrane Insertion of Matrix Metalloproteinase-7, Supporter of Innate Immunity and Tumors.
Structure, 23, 2015
2MQS
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BU of 2mqs by Molmil
Transient Collagen Triple Helix Binding to a Key Metalloproteinase in Invasion and Development: Spin Labels to Structure
Descriptor: Matrix metalloproteinase-14, THP_L_and_M_chain, THP_T_chain
Authors:Zhao, Y, Marcink, T, Van Doren, S.R.
Deposit date:2014-06-26
Release date:2015-02-11
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Transient collagen triple helix binding to a key metalloproteinase in invasion and development.
Structure, 23, 2015
2POJ
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BU of 2poj by Molmil
NMR Solution Structure of the Inhibitor-Free State of Macrophage Metalloelastase (MMP-12)
Descriptor: CALCIUM ION, Macrophage metalloelastase, ZINC ION
Authors:Bhaskaran, R, Van Doren, S.R.
Deposit date:2007-04-26
Release date:2007-12-04
Last modified:2021-10-20
Method:SOLUTION NMR
Cite:Solution Structure of Inhibitor-Free Human Metalloelastase (MMP-12) Indicates an Internal Conformational Adjustment.
J.Mol.Biol., 374, 2007

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