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PDB: 198 results

5SBG
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BU of 5sbg by Molmil
The crystal structure of METP in complex with Zn at a resolution of 1.34 A.
Descriptor: METP, miniaturized rubredoxin, ZINC ION
Authors:Di Costanzo, L, La Gatta, S, Chino, M.
Deposit date:2021-08-24
Release date:2023-02-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.338 Å)
Cite:Designed Rubredoxin miniature in a fully artificial electron chain triggered by visible light
Nat Commun, 14, 2023
3E8Z
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BU of 3e8z by Molmil
X-ray structure of rat arginase I-N130A mutant: the unliganded complex
Descriptor: Arginase-1, MANGANESE (II) ION
Authors:Shishova, E.Y, Di Costanzo, L, Christianson, D.W.
Deposit date:2008-08-20
Release date:2008-12-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Probing the specificity determinants of amino acid recognition by arginase.
Biochemistry, 48, 2009
3ES3
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BU of 3es3 by Molmil
Directing Noble Metal Ion Chemistry within a Designed Ferritin Protein. The Complex with Gold ions. Ferritin H8-H9x Mutant
Descriptor: CALCIUM ION, Ferritin heavy chain, GOLD ION
Authors:Di Costanzo, L, Christianson, D.W.
Deposit date:2008-10-03
Release date:2008-10-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.795 Å)
Cite:Directing noble metal ion chemistry within a designed ferritin protein.
Biochemistry, 47, 2008
3ERZ
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BU of 3erz by Molmil
Directing Noble Metal Ion Chemistry within a Designed Ferritin Protein. Mercury Ions on the Three-Fold Channel
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, Ferritin heavy chain, ...
Authors:Di Costanzo, L, Christianson, D.W.
Deposit date:2008-10-03
Release date:2008-10-21
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3.056 Å)
Cite:Directing noble metal ion chemistry within a designed ferritin protein.
Biochemistry, 47, 2008
2IMP
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BU of 2imp by Molmil
Crystal structure of lactaldehyde dehydrogenase from E. coli: the ternary complex with lactate (occupancy 0.5) and NADH. Crystals soaked with (L)-Lactate.
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, LACTIC ACID, Lactaldehyde dehydrogenase, ...
Authors:Di Costanzo, L, Gomez, G.A, Christianson, D.W.
Deposit date:2006-10-04
Release date:2007-02-13
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of Lactaldehyde Dehydrogenase from Escherichia coli and Inferences Regarding Substrate and Cofactor Specificity.
J.Mol.Biol., 366, 2007
2HG2
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BU of 2hg2 by Molmil
Structure of Lactaldehyde Dehydrogenase
Descriptor: Aldehyde dehydrogenase A, SULFATE ION
Authors:Di Costanzo, L, Gomez, G.A, Christianson, D.W.
Deposit date:2006-06-26
Release date:2007-05-08
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of lactaldehyde dehydrogenase from Escherichia coli and inferences regarding substrate and cofactor specificity
J.Mol.Biol., 366, 2007
2ILU
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BU of 2ilu by Molmil
Crystal structure of lactaldehyde dehydrogenase from E. coli: the binary complex with NADPH
Descriptor: Aldehyde dehydrogenase A, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, SULFATE ION
Authors:Di Costanzo, L, Gomez, G, Christianson, D.W.
Deposit date:2006-10-03
Release date:2007-05-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of lactaldehyde dehydrogenase from Escherichia coli and inferences regarding substrate and cofactor specificity.
J.Mol.Biol., 366, 2007
3COT
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BU of 3cot by Molmil
Crystal structure of human liver delta(4)-3-ketosteroid 5beta-reductase (akr1d1) in complex with progesterone and nadp. Resolution: 2.03 A.
Descriptor: 3-oxo-5-beta-steroid 4-dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, PROGESTERONE
Authors:Di Costanzo, L, Drury, J, Penning, T.M, Christianson, D.W.
Deposit date:2008-03-29
Release date:2008-04-08
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Crystal Structure of Human Liver {Delta}4-3-Ketosteroid 5{beta}-Reductase (AKR1D1) and Implications for Substrate Binding and Catalysis.
J.Biol.Chem., 283, 2008
3F6P
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BU of 3f6p by Molmil
Crystal Structure of unphosphorelated receiver domain of YycF
Descriptor: Transcriptional regulatory protein yycF
Authors:Zhao, H, Tang, L.
Deposit date:2008-11-06
Release date:2010-03-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Preliminary crystallographic studies of the regulatory domain of response regulator YycF from an essential two-component signal transduction system.
Acta Crystallogr.,Sect.F, 65, 2009
3E9B
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BU of 3e9b by Molmil
X-ray structure of rat arginase I-T135A mutant: the complex with BEC
Descriptor: Arginase-1, MANGANESE (II) ION, S-2-(BORONOETHYL)-L-CYSTEINE
Authors:Shishova, E.Y, Di Costanzo, L, Christianson, D.W.
Deposit date:2008-08-21
Release date:2008-12-02
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Probing the specificity determinants of amino acid recognition by arginase.
Biochemistry, 48, 2009
3DJ8
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BU of 3dj8 by Molmil
Synthesis of (2S)-2-amino-7,8-epoxyoctanoic acid and structure of its metal-bridging complex with human arginase I
Descriptor: 6-[(2R)-oxiran-2-yl]-L-norleucine, Arginase-1, MANGANESE (II) ION
Authors:Di Costanzo, L, Christianson, D.W.
Deposit date:2008-06-22
Release date:2008-07-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Synthesis of (2S)-2-amino-7,8-epoxyoctanoic acid and structure of its metal-bridging complex with human arginase I
Org.Biomol.Chem., 6, 2008
3DOP
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BU of 3dop by Molmil
Crystal structure of 5beta-reductase (AKR1D1) in complex with NADP+ and 5beta-dihydrotestosterone, Resolution 2.00A
Descriptor: 3-oxo-5-beta-steroid 4-dehydrogenase, 5-beta-DIHYDROTESTOSTERONE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Di Costanzo, L, Drury, J.E, Penning, T.M, Christianson, D.W.
Deposit date:2008-07-05
Release date:2008-10-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure and catalytic mechanism of human steroid 5beta-reductase (AKR1D1)
Mol.Cell.Endocrinol., 301, 2009
2JNR
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BU of 2jnr by Molmil
Discovery and optimization of a natural HIV-1 entry inhibitor targeting the gp41 fusion peptide
Descriptor: ENV polyprotein, VIR165
Authors:Munch, J, Standker, L, Adermann, K, Schulz, A, Pohlmann, S, Chaipan, C, Biet, T, Peters, T, Meyer, B, Wilhelm, D, Lu, H, Jing, W, Jiang, S, Forssmann, W, Kirchhoff, F.
Deposit date:2007-02-01
Release date:2007-05-08
Last modified:2023-12-20
Method:SOLUTION NMR
Cite:Discovery and Optimization of a Natural HIV-1 Entry Inhibitor Targeting the gp41 Fusion Peptide.
Cell(Cambridge,Mass.), 129, 2007
3CMF
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BU of 3cmf by Molmil
Crystal structure of human liver 5beta-reductase (AKR1D1) in complex with NADP and CORTISONE. Resolution 1.90 A.
Descriptor: 17,21-DIHYDROXYPREGNA-1,4-DIENE-3,11,20-TRIONE, 3-oxo-5-beta-steroid 4-dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Di Costanzo, L, Drury, J, Penning, T.M, Christianson, D.W.
Deposit date:2008-03-21
Release date:2008-04-08
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of Human Liver {Delta}4-3-Ketosteroid 5{beta}-Reductase (AKR1D1) and Implications for Substrate Binding and Catalysis.
J.Biol.Chem., 283, 2008
3G4D
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BU of 3g4d by Molmil
Crystal Structure of (+)-delta-Cadinene Synthase from Gossypium arboreum and Evolutionary Divergence of Metal Binding Motifs for Catalysis
Descriptor: (+)-delta-cadinene synthase isozyme XC1, BETA-MERCAPTOETHANOL, GLYCEROL
Authors:Gennadios, H.A, Di Costanzo, L, Miller, D.J, Allemann, R.K, Christianson, D.W.
Deposit date:2009-02-03
Release date:2009-06-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.403 Å)
Cite:Crystal structure of (+)-delta-cadinene synthase from Gossypium arboreum and evolutionary divergence of metal binding motifs for catalysis.
Biochemistry, 48, 2009
3E8Q
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X-ray structure of rat arginase I-T135A: the unliganded complex
Descriptor: Arginase-1, MANGANESE (II) ION
Authors:Shishova, E.Y, Di Costanzo, L, Emig, F.A, Ash, D.E, Christianson, D.W.
Deposit date:2008-08-20
Release date:2008-12-02
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Probing the specificity determinants of amino acid recognition by arginase.
Biochemistry, 48, 2009
3E6V
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BU of 3e6v by Molmil
X-ray structure of human arginase I-D183N mutant: the complex with ABH
Descriptor: 2(S)-AMINO-6-BORONOHEXANOIC ACID, Arginase-1, MANGANESE (II) ION
Authors:Di Costanzo, L, Christianson, D.W.
Deposit date:2008-08-16
Release date:2008-12-02
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Probing the specificity determinants of amino acid recognition by arginase.
Biochemistry, 48, 2009
3F80
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BU of 3f80 by Molmil
(S)-2-amino-6-nitrohexanoic acid binds to human arginase I through multiple nitro-metal coordination interactions in the binuclear manganese cluster. Resolution 1.60 A.
Descriptor: 6-nitro-L-norleucine, Arginase-1, MANGANESE (II) ION
Authors:Di Costanzo, L, Christianson, D.W.
Deposit date:2008-11-10
Release date:2008-12-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:(S)-2-Amino-6-nitrohexanoic Acid Binds to Human Arginase I through Multiple Nitro-Metal Coordination Interactions in the Binuclear Manganese Cluster.
J.Am.Chem.Soc., 130, 2008
3G1R
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BU of 3g1r by Molmil
Crystal structure of human liver 5beta-reductase (AKR1D1) in complex with NADP and Finasteride. Resolution 1.70 A
Descriptor: (4aR,4bS,6aS,7S,9aS,9bS,11aR)-N-tert-butyl-4a,6a-dimethyl-2-oxo-2,4a,4b,5,6,6a,7,8,9,9a,9b,10,11,11a-tetradecahydro-1H-indeno[5,4-f]quinoline-7-carboxamide, 3-oxo-5-beta-steroid 4-dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Di Costanzo, L, Drury, J.E, Penning, T.M, Christianson, D.W.
Deposit date:2009-01-30
Release date:2009-06-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.701 Å)
Cite:Inhibition of human steroid 5beta-reductase (AKR1D1) by finasteride and structure of the enzyme-inhibitor complex.
J.Biol.Chem., 284, 2009
3G4F
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BU of 3g4f by Molmil
Crystal Structure of (+)- -Cadinene Synthase from Gossypium arboreum in complex with 2-fluorofarnesyl diphosphate
Descriptor: (+)-delta-cadinene synthase isozyme XC1, (2Z,6E)-2-fluoro-3,7,11-trimethyldodeca-2,6,10-trien-1-yl trihydrogen diphosphate, BETA-MERCAPTOETHANOL, ...
Authors:Gennadios, H.A, Di Costanzo, L, Christianson, D.W.
Deposit date:2009-02-03
Release date:2009-06-23
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.651 Å)
Cite:Crystal structure of (+)-delta-cadinene synthase from Gossypium arboreum and evolutionary divergence of metal binding motifs for catalysis.
Biochemistry, 48, 2009
1LT1
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BU of 1lt1 by Molmil
SLIDING HELIX INDUCED CHANGE OF COORDINATION GEOMETRY IN A MODEL DI-MN(II) PROTEIN
Descriptor: L13G-DF1, MANGANESE (II) ION
Authors:Di Costanzo, L, Geremia, S.
Deposit date:2002-05-20
Release date:2003-05-20
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Sliding helix and change of coordination geometry in a model di-MnII protein
Angew.Chem.Int.Ed.Engl., 42, 2003
5SBJ
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The crystal structure of METP in complex with Cd at a resolution of 1.29 A.
Descriptor: CADMIUM ION, METP, miniaturized rubredoxin
Authors:Di Costanzo, L, La Gatta, S, Pavone, V.
Deposit date:2021-08-24
Release date:2023-02-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:Miniaturization process reloaded - structural and functional insights from a miniaturized rubredoxin
To be published
1JM0
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BU of 1jm0 by Molmil
CRYSTAL STRUCTURE OF FOUR-HELIX BUNDLE MODEL
Descriptor: DIMETHYL SULFOXIDE, MANGANESE (II) ION, PROTEIN (FOUR-HELIX BUNDLE MODEL)
Authors:Di Costanzo, L, Geremia, S.
Deposit date:2001-07-17
Release date:2002-01-16
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Toward the de novo design of a catalytically active helix bundle: a substrate-accessible carboxylate-bridged dinuclear metal center.
J.Am.Chem.Soc., 123, 2001
1JMB
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CRYSTAL STRUCTURE OF FOUR-HELIX BUNDLE MODEL
Descriptor: DIMETHYL SULFOXIDE, MANGANESE (II) ION, PROTEIN (FOUR-HELIX BUNDLE MODEL)
Authors:Di Costanzo, L, Geremia, S.
Deposit date:2001-07-18
Release date:2002-01-16
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Toward the de novo design of a catalytically active helix bundle: a substrate-accessible carboxylate-bridged dinuclear metal center.
J.Am.Chem.Soc., 123, 2001
1PYZ
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BU of 1pyz by Molmil
CRYSTALLOGRAPHIC STRUCTURE OF MIMOCHROME IV
Descriptor: CHLORIDE ION, CO(III)-(DEUTEROPORPHYRIN IX), MIMOCHROME IV, ...
Authors:Di Costanzo, L, Geremia, S, Randaccio, L, Nastri, F, Maglio, O, Lombardi, A, Pavone, V.
Deposit date:2003-07-09
Release date:2004-12-14
Last modified:2018-06-27
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Miniaturized heme proteins: crystal structure of Co(III)-mimochrome IV.
J.Biol.Inorg.Chem., 9, 2004

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