Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 75 results

7Y4H
DownloadVisualize
BU of 7y4h by Molmil
AcvX from Actinomadura viridis that exhibits deglycosylation activity on lobophorins
Descriptor: AcvX
Authors:Tan, B, Zhang, L.P, Zhang, C.S.
Deposit date:2022-06-14
Release date:2023-05-24
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A Widespread Glycosidase Confers Lobophorin Resistance and Host-Dependent Structural Diversity.
Angew.Chem.Int.Ed.Engl., 62, 2023
7YKJ
DownloadVisualize
BU of 7ykj by Molmil
Omicron RBDs bound with P3E6 Fab (one up and one down)
Descriptor: P3E6 heavy chain, P3E6 light chain, Spike glycoprotein
Authors:Tang, B, Dang, S.
Deposit date:2022-07-22
Release date:2022-12-28
Last modified:2023-01-18
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural insights into broadly neutralizing antibodies elicited by hybrid immunity against SARS-CoV-2.
Emerg Microbes Infect, 12, 2023
6U77
DownloadVisualize
BU of 6u77 by Molmil
yGsy2p in complex with small molecule
Descriptor: 2-methoxy-4-(1-{2-[(2S)-1-methylpyrrolidin-2-yl]ethyl}-4-phenyl-1H-imidazol-5-yl)phenol, 6-O-phosphono-alpha-D-glucopyranose, Glycogen [starch] synthase isoform 2
Authors:Tang, B, Hurley, T.D.
Deposit date:2019-08-31
Release date:2020-03-18
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Discovery and Development of Small-Molecule Inhibitors of Glycogen Synthase.
J.Med.Chem., 63, 2020
1UFH
DownloadVisualize
BU of 1ufh by Molmil
Structure of putative acetyltransferase, YYCN protein of Bacillus subtilis
Descriptor: YYCN protein
Authors:Taneja, B, Maar, S, Shuvalova, L, Collart, F.R, Anderson, W, Mondragon, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2003-05-29
Release date:2003-06-24
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of the bacillus subtilis YYCN protein: a putative N-acetyltransferase
Proteins, 53, 2003
1D40
DownloadVisualize
BU of 1d40 by Molmil
BASE SPECIFIC BINDING OF COPPER(II) TO Z-DNA: THE 1.3-ANGSTROMS SINGLE CRYSTAL STRUCTURE OF D(M5CGUAM5CG) IN THE PRESENCE OF CUCL2
Descriptor: COPPER (II) CHLORIDE, COPPER (II) ION, DNA (5'-D(*(5CM)P*(CU)GP*UP*AP*(5CM)P*(CU)G)-3')
Authors:Geierstanger, B.H, Kagawa, T.F, Chen, S.-L, Quigley, G.J, Ho, P.S.
Deposit date:1991-05-07
Release date:1992-04-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Base-specific binding of copper(II) to Z-DNA. The 1.3-A single crystal structure of d(m5CGUAm5CG) in the presence of CuCl2.
J.Biol.Chem., 266, 1991
2CSB
DownloadVisualize
BU of 2csb by Molmil
Crystal structure of Topoisomerase V from Methanopyrus kandleri (61 kDa fragment)
Descriptor: MAGNESIUM ION, Topoisomerase V
Authors:Taneja, B, Patel, A, Slesarev, A, Mondragon, A.
Deposit date:2005-05-21
Release date:2006-01-31
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of the N-terminal fragment of topoisomerase V reveals a new family of topoisomerases
Embo J., 25, 2006
3DCG
DownloadVisualize
BU of 3dcg by Molmil
Crystal Structure of the HIV Vif BC-box in Complex with Human ElonginB and ElonginC
Descriptor: Transcription elongation factor B polypeptide 1, Transcription elongation factor B polypeptide 2, Virion infectivity factor
Authors:Stanley, B.J, Ehrlich, E.S, Short, L, Yu, Y, Xiao, Z, Yu, X.-F, Xiong, Y.
Deposit date:2008-06-03
Release date:2008-07-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural insight into the human immunodeficiency virus Vif SOCS box and its role in human E3 ubiquitin ligase assembly
J.Virol., 82, 2008
1HX5
DownloadVisualize
BU of 1hx5 by Molmil
Crystal structure of M. tuberculosis chaperonin-10
Descriptor: 10 KDA CHAPERONIN
Authors:Taneja, B, Mande, S.C, TB Structural Genomics Consortium (TBSGC)
Deposit date:2001-01-11
Release date:2001-08-08
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Three-dimensional Structure of Mycobacterium tuberculosis Chaperonin-10 Reveals a Partially Stable Conformation for its Mobile Loop
CURR.SCI., 81, 2001
2CSD
DownloadVisualize
BU of 2csd by Molmil
Crystal structure of Topoisomerase V (61 kDa fragment)
Descriptor: Topoisomerase V
Authors:Taneja, B, Patel, A, Slesarev, A, Mondragon, A.
Deposit date:2005-05-21
Release date:2006-01-31
Last modified:2019-07-24
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of the N-terminal fragment of topoisomerase V reveals a new family of topoisomerases
Embo J., 25, 2006
8UVM
DownloadVisualize
BU of 8uvm by Molmil
SARS-CoV-2 papain-like protease (PLpro) complex with covalent inhibitor Jun11313
Descriptor: CHLORIDE ION, Papain-like protease nsp3, SULFATE ION, ...
Authors:Ansari, A, Tan, B, Chopra, A, Ruiz, F.X, Arnold, E, Wang, J.
Deposit date:2023-11-03
Release date:2024-04-03
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Design of a SARS-CoV-2 papain-like protease inhibitor with antiviral efficacy in a mouse model.
Science, 383, 2024
8UUG
DownloadVisualize
BU of 8uug by Molmil
SARS-CoV-2 papain-like protease (PLpro) with inhibitor Jun12303
Descriptor: ACETATE ION, CHLORIDE ION, GLYCEROL, ...
Authors:Ansari, A, Tan, B, Ruiz, F.X, Arnold, E, Wang, J.
Deposit date:2023-11-01
Release date:2024-04-03
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.74 Å)
Cite:Design of a SARS-CoV-2 papain-like protease inhibitor with antiviral efficacy in a mouse model.
Science, 383, 2024
8UUH
DownloadVisualize
BU of 8uuh by Molmil
SARS-CoV-2 papain-like protease (PLpro) with inhibitor Jun12199
Descriptor: 5-[2-(dimethylamino)ethoxy]-2-methyl-N-[(1R)-1-{(3M,5P)-3-(1-methyl-1H-pyrazol-4-yl)-5-[1-(propan-2-yl)-1H-pyrazol-4-yl]phenyl}ethyl]benzamide, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Ansari, A, Tan, B, Ruiz, F.X, Arnold, E, Wang, J.
Deposit date:2023-11-01
Release date:2024-04-03
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Design of a SARS-CoV-2 papain-like protease inhibitor with antiviral efficacy in a mouse model.
Science, 383, 2024
8UUW
DownloadVisualize
BU of 8uuw by Molmil
SARS-CoV-2 papain-like protease (PLpro) with inhibitor Jun12145
Descriptor: 5-[2-(dimethylamino)ethoxy]-2-methyl-N-{(1R)-1-[(3P,5M)-3-(1-methyl-1H-pyrazol-4-yl)-5-(1,3-thiazol-5-yl)phenyl]ethyl}benzamide, ACETATE ION, CHLORIDE ION, ...
Authors:Ansari, A, Tan, B, Ruiz, F.X, Arnold, E, Wang, J.
Deposit date:2023-11-02
Release date:2024-04-03
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Design of a SARS-CoV-2 papain-like protease inhibitor with antiviral efficacy in a mouse model.
Science, 383, 2024
8UUF
DownloadVisualize
BU of 8uuf by Molmil
SARS-CoV-2 papain-like protease (PLpro) with inhibitor Jun11941
Descriptor: ACETATE ION, CHLORIDE ION, N-{(1R)-1-[(3M,5P)-3,5-bis(1-methyl-1H-pyrazol-4-yl)phenyl]ethyl}-5-[2-(dimethylamino)ethoxy]-2-methylbenzamide, ...
Authors:Ansari, A, Tan, B, Riuz, F.X, Arnold, E, Wang, J.
Deposit date:2023-11-01
Release date:2024-04-03
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.84 Å)
Cite:Design of a SARS-CoV-2 papain-like protease inhibitor with antiviral efficacy in a mouse model.
Science, 383, 2024
8UUY
DownloadVisualize
BU of 8uuy by Molmil
SARS-CoV-2 papain-like protease (PLpro) complex with inhibitor Jun12129
Descriptor: ACETATE ION, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Ansari, A, Tan, B, Ruiz, F.X, Arnold, E, Wang, J.
Deposit date:2023-11-02
Release date:2024-04-03
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Design of a SARS-CoV-2 papain-like protease inhibitor with antiviral efficacy in a mouse model.
Science, 383, 2024
8UUU
DownloadVisualize
BU of 8uuu by Molmil
SARS-Cov-2 papain-like protease (PLpro) with inhibitor Jun12162
Descriptor: ACETATE ION, CHLORIDE ION, GLYCEROL, ...
Authors:Ansari, A, Tan, B, Ruiz, F.X, Arnold, E, Wang, J.
Deposit date:2023-11-02
Release date:2024-04-03
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3.01 Å)
Cite:Design of a SARS-CoV-2 papain-like protease inhibitor with antiviral efficacy in a mouse model.
Science, 383, 2024
8UUV
DownloadVisualize
BU of 8uuv by Molmil
SARS-CoV-2 papain-like protease (PLpro) with inhibitor Jun12197
Descriptor: CHLORIDE ION, N-{(1R)-1-[(3P,5P)-3-(1-cyclopropyl-1H-pyrazol-4-yl)-5-(1-methyl-1H-pyrazol-4-yl)phenyl]ethyl}-5-[2-(dimethylamino)ethoxy]-2-methylbenzamide, Papain-like protease nsp3, ...
Authors:Ansari, A, Tan, B, Arnold, E, Ruiz, F.X, Wang, J.
Deposit date:2023-11-02
Release date:2024-04-03
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3.01 Å)
Cite:Design of a SARS-CoV-2 papain-like protease inhibitor with antiviral efficacy in a mouse model.
Science, 383, 2024
1T8H
DownloadVisualize
BU of 1t8h by Molmil
1.8 A CRYSTAL STRUCTURE OF AN UNCHARACTERIZED B. STEAROTHERMOPHILUS PROTEIN
Descriptor: BETA-MERCAPTOETHANOL, YlmD protein sequence homologue, ZINC ION
Authors:Minasov, G, Shuvalova, L, Mondragon, A, Taneja, B, Moy, S.F, Collart, F.R, Anderson, W.F, Midwest Center for Structural Genomics (MCSG)
Deposit date:2004-05-12
Release date:2004-05-18
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:1.8 A CRYSTAL STRUCTURE OF AN UNCHARACTERIZED B. STEAROTHERMOPHILUS PROTEIN
To be Published
8UOB
DownloadVisualize
BU of 8uob by Molmil
SARS-CoV-2 Papain-like protease (PLpro) with Inhibitor Jun12682
Descriptor: 5-[2-(dimethylamino)ethoxy]-N-{(1R)-1-[(3M,5P)-3-(1-ethyl-1H-pyrazol-3-yl)-5-(1-methyl-1H-pyrazol-4-yl)phenyl]ethyl}-2-methylbenzamide, CHLORIDE ION, Papain-like protease nsp3, ...
Authors:Ansari, A, Tan, B, Ruiz, F.X, Wang, J, Arnold, E.
Deposit date:2023-10-19
Release date:2024-04-03
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:Design of a SARS-CoV-2 papain-like protease inhibitor with antiviral efficacy in a mouse model.
Science, 383, 2024
8TWV
DownloadVisualize
BU of 8twv by Molmil
ELIC5 with Propylamine in spNW15 nanodiscs with 2:1:1 POPC:POPE:POPG
Descriptor: 3-AMINOPROPANE, Gamma-aminobutyric-acid receptor subunit beta-1
Authors:Dalal, V, Arcario, M.J, Petroff II, J.T, Deitzen, N.M, Tan, B.K, Brannigan, G, Cheng, W.W.L.
Deposit date:2023-08-21
Release date:2024-03-27
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Lipid nanodisc scaffold and size alter the structure of a pentameric ligand-gated ion channel.
Nat Commun, 15, 2024
8TWZ
DownloadVisualize
BU of 8twz by Molmil
ELIC with Propylamine in spNW15 nanodiscs with 2:1:1 POPC:POPE:POPG
Descriptor: 3-AMINOPROPANE, Erwinia chrysanthemi ligand-gated ion channel
Authors:Dalal, V, Arcario, M.J, Petroff II, J.T, Deitzen, N.M, Tan, B.K, Brannigan, G, Cheng, W.W.L.
Deposit date:2023-08-21
Release date:2024-03-27
Method:ELECTRON MICROSCOPY (3.17 Å)
Cite:Lipid nanodisc scaffold and size alter the structure of a pentameric ligand-gated ion channel.
Nat Commun, 15, 2024
8F35
DownloadVisualize
BU of 8f35 by Molmil
Apo ELIC in spMSP1D1 nanodiscs with 2:1:1 POPC:POPE:POPG
Descriptor: Erwinia chrysanthemi ligand-gated ion channel
Authors:Dalal, V, Arcario, M.J, Petroff II, J.T, Deitzen, N.M, Tan, B.K, Brannigan, G, Cheng, W.W.L.
Deposit date:2022-11-09
Release date:2023-11-15
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.17 Å)
Cite:Lipid nanodisc scaffold and size alter the structure of a pentameric ligand-gated ion channel.
Nat Commun, 15, 2024
8F33
DownloadVisualize
BU of 8f33 by Molmil
ELIC with Propylamine in saposin nanodiscs with 2:1:1 POPC:POPE:POPG
Descriptor: 3-AMINOPROPANE, Erwinia chrysanthemi ligand-gated ion channel
Authors:Dalal, V, Arcario, M.J, Petroff II, J.T, Deitzen, N.M, Tan, B.K, Brannigan, G, Cheng, W.W.L.
Deposit date:2022-11-09
Release date:2023-11-15
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.28 Å)
Cite:Lipid nanodisc scaffold and size alter the structure of a pentameric ligand-gated ion channel.
Nat Commun, 15, 2024
8F34
DownloadVisualize
BU of 8f34 by Molmil
ELIC with Propylamine in spMSP1D1 nanodiscs with 2:1:1 POPC:POPE:POPG
Descriptor: 3-AMINOPROPANE, Erwinia chrysanthemi ligand-gated ion channel
Authors:Dalal, V, Arcario, M.J, Petroff II, J.T, Deitzen, N.M, Tan, B.K, Brannigan, G, Cheng, W.W.L.
Deposit date:2022-11-09
Release date:2023-11-15
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.12 Å)
Cite:Lipid nanodisc scaffold and size alter the structure of a pentameric ligand-gated ion channel.
Nat Commun, 15, 2024
8F32
DownloadVisualize
BU of 8f32 by Molmil
ELIC with Propylamine in SMA nanodiscs with 2:1:1 POPC:POPE:POPG
Descriptor: 3-AMINOPROPANE, Erwinia chrysanthemi ligand-gated ion channel
Authors:Dalal, V, Arcario, M.J, Petroff II, J.T, Deitzen, N.M, Tan, B.K, Brannigan, G, Cheng, W.W.L.
Deposit date:2022-11-09
Release date:2023-11-15
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.71 Å)
Cite:Lipid nanodisc scaffold and size alter the structure of a pentameric ligand-gated ion channel.
Nat Commun, 15, 2024

 

123>

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon