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PDB: 906 件
6BRP
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F-box protein form 2
分子名称: F-box/LRR-repeat MAX2 homolog, SKP1-like protein 1A
著者Shabek, N, Zheng, N, Mao, H, Hinds, T.R, Ticchiarelli, F, Leyser, O.
登録日2017-11-30
公開日2018-11-21
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Structural plasticity of D3-D14 ubiquitin ligase in strigolactone signalling.
Nature, 563, 2018
1XHF
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Crystal structure of the bef3-activated receiver domain of redox response regulator arca
分子名称: Aerobic respiration control protein arcA, BERYLLIUM DIFLUORIDE, BERYLLIUM TETRAFLUORIDE ION, ...
著者Toro-Roman, A, Mack, T.R, Stock, A.M.
登録日2004-09-18
公開日2005-05-17
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (2.152 Å)
主引用文献Structural Analysis and Solution Studies of the Activated Regulatory Domain of the Response Regulator ArcA: A Symmetric Dimer Mediated by the alpha4-beta5-alpha5 Face
J.Mol.Biol., 349, 2005
6BBE
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Structure of N-glycosylated porcine surfactant protein-D
分子名称: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者van Eijk, M, Rynkiewicz, M.J, Khatri, K, Leymarie, N, Zaia, J, White, M.R, Hartshorn, K.L, Cafarella, T.R, van Die, I, Hessing, M, Seaton, B.A, Haagsman, H.P.
登録日2017-10-18
公開日2018-05-23
最終更新日2021-03-24
実験手法X-RAY DIFFRACTION (1.898 Å)
主引用文献Lectin-mediated binding and sialoglycans of porcine surfactant protein D synergistically neutralize influenza A virus.
J. Biol. Chem., 293, 2018
1X8W
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Structure of the Tetrahymena Ribozyme: Base Triple Sandwich and Metal Ion at the Active Site
分子名称: MAGNESIUM ION, Tetrahymena ribozyme RNA
著者Guo, F, Gooding, A.R, Cech, T.R.
登録日2004-08-18
公開日2004-11-09
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献Structure of the Tetrahymena ribozyme: base triple sandwich and metal ion at the active site.
Mol.Cell, 16, 2004
1NTQ
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5'(dCCUCCUU)3':3'(rAGGAGGAAA)5'
分子名称: 5'-D(*CP*CP*UP*CP*CP*UP*U)-3', 5'-R(*AP*AP*AP*GP*GP*AP*GP*GP*A)-3'
著者Znosko, B.M, Barnes III, T.W, Krugh, T.R, Turner, D.H.
登録日2003-01-30
公開日2003-06-10
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献NMR Studies of DNA Single Strands and DNA:RNA Hybrids With and Without 1-Propynylation at C5 of Oligopyrimidines
J.Am.Chem.Soc., 125, 2003
1NTS
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5'(dCCPUPCPCPUPUP)3':3'(rAGGAGGAAA)5', where P=propynyl
分子名称: 5'-D(*(5PC)P*(5PC)P*(PDU)P*(5PC)P*(5PC)P*(PDU)P*(PDU))-3', 5'-R(*AP*AP*AP*GP*GP*AP*GP*GP*A)-3'
著者Znosko, B.M, Barnes III, T.W, Krugh, T.R, Turner, D.H.
登録日2003-01-30
公開日2003-06-10
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献NMR Studies of DNA Single Strands and DNA:RNA Hybrids With and Without 1-Propynylation at C5 of Oligopyrimidines
J.Am.Chem.Soc., 125, 2003
1XJV
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Crystal structure of human POT1 bound to telomeric single-stranded DNA (TTAGGGTTAG)
分子名称: Protection of telomeres 1, hT10 d(TTAGGGTTAG)
著者Lei, M, Podell, E.R, Cech, T.R.
登録日2004-09-25
公開日2004-12-14
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Structure of human POT1 bound to telomeric single-stranded DNA provides a model for chromosome end-protection
Nat.Struct.Mol.Biol., 11, 2004
1XV0
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Solution NMR structure of RNA internal loop with three consecutive sheared GA pairs in 5'GGUGGAGGCU/3'PCCGAAGCCG
分子名称: 5'-R(*GP*CP*CP*GP*AP*AP*GP*CP*CP*(P5P)-3', 5'-R(*GP*GP*UP*GP*GP*AP*GP*GP*CP*U)-3'
著者Chen, G, Znosko, B.M, Kennedy, S.D, Krugh, T.R, Turner, D.H.
登録日2004-10-26
公開日2004-11-09
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution Structure of an RNA Internal Loop with Three Consecutive Sheared GA Pairs
Biochemistry, 44, 2005
1NX9
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Acetobacter turbidans alpha-amino acid ester hydrolase S205A mutant complexed with ampicillin
分子名称: (2S,5R,6R)-6-{[(2R)-2-AMINO-2-PHENYLETHANOYL]AMINO}-3,3-DIMETHYL-7-OXO-4-THIA-1-AZABICYCLO[3.2.0]HEPTANE-2-CARBOXYLIC ACID, GLYCEROL, alpha-amino acid ester hydrolase
著者Barends, T.R.M, Polderman-Tijmes, J.J, Jekel, P.A, Janssen, D.B, Dijkstra, B.W.
登録日2003-02-10
公開日2004-03-09
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Acetobacter turbidans {alpha}-Amino Acid Ester Hydrolase: HOW A SINGLE MUTATION IMPROVES AN ANTIBIOTIC-PRODUCING ENZYME.
J.Biol.Chem., 281, 2006
6BBD
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Structure of N-glycosylated porcine surfactant protein-D complexed with glycerol
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, GLYCEROL, ...
著者van Eijk, M, Rynkiewicz, M.J, Khatri, K, Leymarie, N, Zaia, J, White, M.R, Hartshorn, K.L, Cafarella, T.R, van Die, I, Hessing, M, Seaton, B.A, Haagsman, H.P.
登録日2017-10-18
公開日2018-05-23
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.898 Å)
主引用文献Lectin-mediated binding and sialoglycans of porcine surfactant protein D synergistically neutralize influenza A virus.
J. Biol. Chem., 293, 2018
6BRQ
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Crystal structure of rice ASK1-D3 ubiquitin ligase complex crystal form 3
分子名称: F-box/LRR-repeat MAX2 homolog, SKP1-like protein 1A
著者Shabek, N, Zheng, N, Mao, H, Hinds, T.R, Ticchiarelli, F, Leyser, O.
登録日2017-11-30
公開日2018-11-21
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.99 Å)
主引用文献Structural plasticity of D3-D14 ubiquitin ligase in strigolactone signalling.
Nature, 563, 2018
1OAB
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CRYSTAL STRUCTURE OF THE TYROSINE REGULATED 3-DEOXY-D-ARABINO-HEPTULOSONATE-7-PHOSPHATE SYNTHASE FROM SACCHAROMYCES CEREVISIAE IN COMPLEX WITH PHOSPHOENOLPYRUVATE AND MANGANESE(II)
分子名称: MANGANESE (II) ION, PHOSPHOENOLPYRUVATE, TYROSINE-REGULATED 3-DEOXY-D-ARABINO-HEPTULOSONATE-7-PHOSPHATE SYNTHASE
著者Koenig, V, Pfeil, A, Heinrich, G, Braus, G.H, Schneider, T.R.
登録日2003-01-06
公開日2004-01-23
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Substrate and Metal Complexes of 3-Deoxy-D-Arabino-Heptulosonate-7-Phosphate Synthase from Saccharomyces Cerevisiae Provide New Insights Into the Catalytic Mechanism
J.Mol.Biol., 337, 2004
6BRT
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F-box protein CTH with hydrolase
分子名称: (5R)-5-hydroxy-3-methylfuran-2(5H)-one, D3-CTH-D14-D-ring
著者Shabek, N, Zheng, N, Mao, H, Hinds, T.R, Ticchiarelli, F, Leyser, O.
登録日2017-12-01
公開日2018-11-21
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.393 Å)
主引用文献Structural plasticity of D3-D14 ubiquitin ligase in strigolactone signalling.
Nature, 563, 2018
1U6Q
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Substituted 2-Naphthamadine inhibitors of Urokinase
分子名称: TRANS-6-(2-PHENYLCYCLOPROPYL)-NAPHTHALENE-2-CARBOXAMIDINE, Urokinase-type plasminogen activator
著者Bruncko, M, McClellan, W, Wendt, M.D, Sauer, D.R, Geyer, A, Dalton, C.R, Kaminski, M.K, Nienaber, V.L, Rockway, T.R, Giranda, V.L.
登録日2004-07-30
公開日2004-10-19
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献Naphthamidine urokinase plasminogen activator inhibitors with improved pharmacokinetic properties.
Bioorg.Med.Chem.Lett., 15, 2005
1Y2O
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Structure of N-terminal domain IRSp53/BAIAP2
分子名称: BAI1-associated protein 2 isoform 1
著者Millard, T.H, Bompard, G, Heung, M.-Y, Dafforn, T.R, Scott, D.J, Machesky, L.M, Futterer, K.
登録日2004-11-23
公開日2005-02-15
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural basis of filopodia formation induced by the IRSp53/MIM homology domain of human IRSp53
Embo J., 24, 2005
1Y4K
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Lipoxygenase-1 (Soybean) at 100K, N694G Mutant
分子名称: 1,2-ETHANEDIOL, ACETATE ION, FE (II) ION, ...
著者Chruszcz, M, Segraves, E, Holman, T.R, Minor, W.
登録日2004-12-01
公開日2005-12-13
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Kinetic, spectroscopic, and structural investigations of the soybean lipoxygenase-1 first-coordination sphere mutant, Asn694Gly.
Biochemistry, 45, 2006
6MZ0
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Crystal structure of Tdp1 catalytic domain in complex with compound XZ530
分子名称: 1,2-ETHANEDIOL, 5-hydroxypyrazine-2,3-dicarboxylic acid, Tyrosyl-DNA phosphodiesterase 1
著者Lountos, G.T, Zhao, X.Z, Kiselev, E, Tropea, J.E, Needle, D, Burke Jr, T.R, Pommier, Y, Waugh, D.S.
登録日2018-11-02
公開日2019-11-06
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.969 Å)
主引用文献Structure of Tdp1 catalytic domain in complex with compound XZ530
To Be Published
6N0R
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Crystal structure of Tdp1 catalytic domain in complex with compound XZ572
分子名称: 1,2-ETHANEDIOL, 4-(methylamino)benzene-1,2-dicarboxylic acid, DIMETHYL SULFOXIDE, ...
著者Lountos, G.T, Zhao, X.Z, Kiselev, E, Tropea, J.E, Needle, D, Burke Jr, T.R, Pommier, Y, Waugh, D.S.
登録日2018-11-07
公開日2019-11-13
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.544 Å)
主引用文献Crystal structure of Tdp1 catalytic domain
To Be Published
5K67
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Designed Artificial Cupredoxins
分子名称: GLYCEROL, Streptavidin, [CuII(biot-pr-dpea)]2+
著者Mann, S.I, Heinisch, T, Weitz, A.C, Hendrich, M.R, Ward, T.R, Borovik, A.S.
登録日2016-05-24
公開日2016-07-20
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Modular Artificial Cupredoxins.
J.Am.Chem.Soc., 138, 2016
6N17
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Crystal structure of Tdp1 catalytic domain in complex with compound XZ577
分子名称: 1,2-ETHANEDIOL, 4-[(3-carboxypropanoyl)amino]benzene-1,2-dicarboxylic acid, DIMETHYL SULFOXIDE, ...
著者Lountos, G.T, Zhao, X.Z, Kiselev, E, Tropea, J.E, Needle, D, Burke Jr, T.R, Pommier, Y, Waugh, D.S.
登録日2018-11-08
公開日2019-07-03
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.639 Å)
主引用文献Identification of a ligand binding hot spot and structural motifs replicating aspects of tyrosyl-DNA phosphodiesterase I (TDP1) phosphoryl recognition by crystallographic fragment cocktail screening.
Nucleic Acids Res., 47, 2019
5K8B
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X-ray structure of KdnA, 8-amino-3,8-dideoxy-alpha-D-manno-octulosonate transaminase, from Shewanella oneidensis in the presence of the external aldimine with PLP and glutamate
分子名称: 8-amino-3,8-dideoxy-alpha-D-manno-octulosonate transaminase, CHLORIDE ION, N-({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)-D-GLUTAMIC ACID, ...
著者Holden, H.M, Thoden, J.B, Zachman-Brockmeyer, T.R.
登録日2016-05-28
公開日2016-06-15
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structures of KdnB and KdnA from Shewanella oneidensis: Key Enzymes in the Formation of 8-Amino-3,8-Dideoxy-d-Manno-Octulosonic Acid.
Biochemistry, 55, 2016
6N0D
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Crystal structure of Tdp1 catalytic domain in complex with compound XZ575
分子名称: 1,2-ETHANEDIOL, 4-fluorobenzene-1,2-dicarboxylic acid, Tyrosyl-DNA phosphodiesterase 1
著者Lountos, G.T, Zhao, X.Z, Kiselev, E, Tropea, J.E, Needle, D, Burke Jr, T.R, Pommier, Y, Waugh, D.S.
登録日2018-11-07
公開日2019-11-13
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.453 Å)
主引用文献Crystal structure of Tdp1 catalytic domain in complex with compound XZ575
To Be Published
6N2H
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Structure of D-ornithine/D-lysine decarboxylase from Salmonella typhimurium
分子名称: 1,4-DIETHYLENE DIOXIDE, D-ornithine/D-lysine decarboxylase, DIMETHYL SULFOXIDE
著者Phillips, R.S, Hoover, T.R.
登録日2018-11-13
公開日2019-10-23
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Crystal Structure of d-Ornithine/d-Lysine Decarboxylase, a Stereoinverting Decarboxylase: Implications for Substrate Specificity and Stereospecificity of Fold III Decarboxylases.
Biochemistry, 58, 2019
6NEI
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Scoulerine 9-O-methyltransferase from Thalictrum flavum
分子名称: (S)-scoulerine 9-O-methyltransferase, SULFATE ION
著者Valentic, T.R, Smolke, C.D, Payne, J.T.
登録日2018-12-17
公開日2019-12-18
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural and functional characterization of the scoulerine 9-O methyltransferase from Thalictrum flavum.
To Be Published
6NMY
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A Cytokine-receptor complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Cytokine receptor common subunit beta, ...
著者Dhagat, U, Kan, W.L, Hercus, T.R, Broughton, S.E, Nero, T.L, Lopez, A.F, Parker, M.W.
登録日2019-01-13
公開日2020-01-22
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.301 Å)
主引用文献Signalling conformation of cell surface receptor
To Be Published

221716

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