Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 235 results

4FSY
DownloadVisualize
BU of 4fsy by Molmil
Crystal Structure of the CHK1
Descriptor: 2-(11-oxo-10,11-dihydro-5H-dibenzo[b,e][1,4]diazepin-3-yl)benzamide, GLYCEROL, ISOPROPYL ALCOHOL, ...
Authors:Kang, Y.N, Stuckey, J.A, Chang, P, Russell, A.J.
Deposit date:2012-06-27
Release date:2012-08-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure of the CHK1
To be Published
4FUH
DownloadVisualize
BU of 4fuh by Molmil
Crystal Structure of the Urokinase
Descriptor: 6-[(phenylcarbamoyl)amino]naphthalene-2-carboximidamide, ACETATE ION, GLYCEROL, ...
Authors:Kang, Y.N, Stuckey, J.A, Nienaber, V, Giranda, V.
Deposit date:2012-06-28
Release date:2012-08-22
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal Structure of the Urokinase
to be published
4FV4
DownloadVisualize
BU of 4fv4 by Molmil
Crystal Structure of the ERK2 complexed with EK7
Descriptor: 9-(dimethylamino)-2-[(3-hydroxyphenyl)amino]-5,6-dihydrothieno[3,4-h]quinazoline-7-carbonitrile, GLYCEROL, Mitogen-activated protein kinase 1, ...
Authors:Kang, Y.N, Stuckey, J.A, Xie, X.
Deposit date:2012-06-29
Release date:2012-08-29
Last modified:2014-09-24
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of the ERK2 complexed with EK7
TO BE PUBLISHED
4FW6
DownloadVisualize
BU of 4fw6 by Molmil
Crystal Structure of the LpxC in complex with N-[(2S,3R)-3-HYDROXY-1-(HYDROXYAMINO)-1-OXOBUTAN-2-YL]-4-(PHENYLETHYNYL)BENZAMIDE inhibitor
Descriptor: ACETATE ION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Kang, Y.N, Stuckey, J.A.
Deposit date:2012-06-29
Release date:2013-05-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Crystal Structure of the LpxC
to be published
6C7R
DownloadVisualize
BU of 6c7r by Molmil
BRD4 BD1 in complex with compound CF53
Descriptor: Bromodomain-containing protein 4, N-(3-cyclopropyl-1-methyl-1H-pyrazol-5-yl)-7-(3,5-dimethyl-1,2-oxazol-4-yl)-6-methoxy-2-methyl-9H-pyrimido[4,5-b]indol-4-amine
Authors:Meagher, J.L, Stuckey, J.A.
Deposit date:2018-01-23
Release date:2018-08-01
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure-Based Discovery of CF53 as a Potent and Orally Bioavailable Bromodomain and Extra-Terminal (BET) Bromodomain Inhibitor.
J. Med. Chem., 61, 2018
6CJG
DownloadVisualize
BU of 6cjg by Molmil
Human dihydroorotate dehydrogenase bound to napthyridine inhibitor 46
Descriptor: 2-([1,1'-biphenyl]-4-yl)-3-methyl-1,7-naphthyridine-4-carboxylic acid, 3-[decyl(dimethyl)ammonio]propane-1-sulfonate, Dihydroorotate dehydrogenase (quinone), ...
Authors:Petrunak, E.M, Stuckey, J.A.
Deposit date:2018-02-26
Release date:2018-05-23
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.851 Å)
Cite:Design, Synthesis, and Biological Evaluation of 4-Quinoline Carboxylic Acids as Inhibitors of Dihydroorotate Dehydrogenase.
J. Med. Chem., 61, 2018
6CJF
DownloadVisualize
BU of 6cjf by Molmil
Human dihydroorotate dehydrogenase bound to 4-quinoline carboxylic acid inhibitor 43
Descriptor: 2-[4-(2-chloro-6-methylpyridin-3-yl)phenyl]-6-fluoro-3-methylquinoline-4-carboxylic acid, 3-[decyl(dimethyl)ammonio]propane-1-sulfonate, Dihydroorotate dehydrogenase (quinone), ...
Authors:Petrunak, E.M, Stuckey, J.A.
Deposit date:2018-02-26
Release date:2018-05-23
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Design, Synthesis, and Biological Evaluation of 4-Quinoline Carboxylic Acids as Inhibitors of Dihydroorotate Dehydrogenase.
J. Med. Chem., 61, 2018
6DHS
DownloadVisualize
BU of 6dhs by Molmil
Structure of hnRNP H qRRM1,2
Descriptor: Heterogeneous nuclear ribonucleoprotein H
Authors:Meagher, J.L, Stuckey, J.A.
Deposit date:2018-05-21
Release date:2018-09-12
Last modified:2019-12-18
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Differential Conformational Dynamics Encoded by the Inter-qRRM linker of hnRNP H.
J. Am. Chem. Soc., 2018
6C7Q
DownloadVisualize
BU of 6c7q by Molmil
BRD4 BD2 in complex with compound CE277
Descriptor: 7-(3,5-dimethyl-1,2-oxazol-4-yl)-6-methoxy-2-methyl-N-(1-methyl-1H-indazol-3-yl)-9H-pyrimido[4,5-b]indol-4-amine, Bromodomain-containing protein 4
Authors:Meagher, J.L, Stuckey, J.A.
Deposit date:2018-01-23
Release date:2018-08-01
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Structure-Based Discovery of CF53 as a Potent and Orally Bioavailable Bromodomain and Extra-Terminal (BET) Bromodomain Inhibitor.
J. Med. Chem., 61, 2018
6DS9
DownloadVisualize
BU of 6ds9 by Molmil
Elongated version of a de novo designed three helix bundle structure (GRa3D)
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, THIOCYANATE ION, ...
Authors:Koebke, K.J, Ruckthong, L.R, Meagher, J.L, Stuckey, J.A, Pecoraro, V.L.
Deposit date:2018-06-13
Release date:2018-10-03
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Clarifying the Copper Coordination Environment in a de Novo Designed Red Copper Protein.
Inorg Chem, 57, 2018
7KMU
DownloadVisualize
BU of 7kmu by Molmil
Structure of WT Malaysian Banana Lectin
Descriptor: 1,2-ETHANEDIOL, Jacalin-type lectin domain-containing protein
Authors:Meagher, J.L, Stuckey, J.A.
Deposit date:2020-11-03
Release date:2021-01-27
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Targeted disruption of pi-pi stacking in Malaysian banana lectin reduces mitogenicity while preserving antiviral activity.
Sci Rep, 11, 2021
7KMV
DownloadVisualize
BU of 7kmv by Molmil
Structure of Malaysian Banana Lectin F84T
Descriptor: Jacalin-type lectin domain-containing protein, SULFATE ION
Authors:Meagher, J.L, Stuckey, J.A.
Deposit date:2020-11-03
Release date:2021-01-27
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Targeted disruption of pi-pi stacking in Malaysian banana lectin reduces mitogenicity while preserving antiviral activity.
Sci Rep, 11, 2021
3SW4
DownloadVisualize
BU of 3sw4 by Molmil
Crystal Structure of the CDK2 in complex with thiazolylpyrimidine inhibitor
Descriptor: ACETATE ION, Cyclin-dependent kinase 2, N'-[4-(2-amino-4-methyl-1,3-thiazol-5-yl)pyrimidin-2-yl]-N,N-dimethylbenzene-1,4-diamine
Authors:Kang, Y.N, Stuckey, J.A.
Deposit date:2011-07-13
Release date:2012-08-01
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of the CDK2 in complex with a thiazolylpyrimidine inhibitor
To be Published
3SPF
DownloadVisualize
BU of 3spf by Molmil
Crystal Structure of Bcl-xL bound to BM501
Descriptor: 4-(4-chlorophenyl)-1-[(3S)-3,4-dihydroxybutyl]-N-[3-(4-methylpiperazin-1-yl)propyl]-3-phenyl-1H-pyrrole-2-carboxamide, Bcl-2-like protein 1, GLYCEROL
Authors:Meagher, J.L, Stuckey, J.A.
Deposit date:2011-07-01
Release date:2012-06-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Design of Bcl-2 and Bcl-xL Inhibitors with Subnanomolar Binding Affinities Based upon a New Scaffold.
J.Med.Chem., 55, 2012
3TWE
DownloadVisualize
BU of 3twe by Molmil
Crystal Structure of the de novo designed peptide alpha4H
Descriptor: ACETYL GROUP, TRIETHYLENE GLYCOL, alpha4H
Authors:Buer, B.C, Meagher, J.L, Stuckey, J.A, Marsh, E.N.G.
Deposit date:2011-09-21
Release date:2012-03-14
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:Structural basis for the enhanced stability of highly fluorinated proteins.
Proc.Natl.Acad.Sci.USA, 109, 2012
3TWG
DownloadVisualize
BU of 3twg by Molmil
Crystal structure of the de novo designed fluorinated peptide alpha4F3af3d
Descriptor: alpha4F3af3d
Authors:Buer, B.C, Meagher, J.L, Stuckey, J.A, Marsh, E.N.G.
Deposit date:2011-09-21
Release date:2012-03-14
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Structural basis for the enhanced stability of highly fluorinated proteins.
Proc.Natl.Acad.Sci.USA, 109, 2012
3TWF
DownloadVisualize
BU of 3twf by Molmil
Crystal structure of the de novo designed fluorinated peptide alpha4F3a
Descriptor: ACETYL GROUP, SODIUM ION, TRIETHYLENE GLYCOL, ...
Authors:Buer, B.C, Meagher, J.L, Stuckey, J.A, Marsh, E.N.G.
Deposit date:2011-09-21
Release date:2012-03-14
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Structural basis for the enhanced stability of highly fluorinated proteins.
Proc.Natl.Acad.Sci.USA, 109, 2012
3SP7
DownloadVisualize
BU of 3sp7 by Molmil
Crystal Structure of Bcl-xL bound to BM903
Descriptor: 5-(4-chlorophenyl)-4-{3-[4-(4-{[(4-{[(2R)-4-(dimethylamino)-1-(phenylsulfanyl)butan-2-yl]amino}-3-nitrophenyl)sulfonyl]amino}phenyl)piperazin-1-yl]phenyl}-1,2-dimethyl-1H-pyrrole-3-carboxylic acid, ACETATE ION, Bcl-2-like protein 1, ...
Authors:Meagher, J.L, Stuckey, J.A.
Deposit date:2011-07-01
Release date:2012-07-04
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structure-based design of a new class of potent Bcl-2/Bcl-xL inhibitors
To be Published
3SW7
DownloadVisualize
BU of 3sw7 by Molmil
Crystal Structure of the CDK2 in complex with thiazolylpyrimidine inhibitor
Descriptor: Cyclin-dependent kinase 2, N~4~-[4-(2,4-dimethyl-1,3-thiazol-5-yl)pyrimidin-2-yl]-N~1~,N~1~-dimethyl-2-nitrobenzene-1,4-diamine
Authors:Kang, Y.N, Stuckey, J.A.
Deposit date:2011-07-13
Release date:2012-08-01
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of the CDK2 in complex with thiazolylpyrimidine inhibitor
To be Published
6W7G
DownloadVisualize
BU of 6w7g by Molmil
Structure of EED bound to inhibitor 1056
Descriptor: 8-(2,6-dimethylpyridin-3-yl)-N-[(5-fluoro-2,3-dihydro-1-benzofuran-4-yl)methyl]-1-(methylsulfonyl)imidazo[1,5-c]pyrimidin-5-amine, FORMIC ACID, Polycomb protein EED, ...
Authors:Petrunak, E.M, Stuckey, J.A.
Deposit date:2020-03-19
Release date:2020-07-08
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:EEDi-5285: An Exceptionally Potent, Efficacious, and Orally Active Small-Molecule Inhibitor of Embryonic Ectoderm Development.
J.Med.Chem., 63, 2020
6W7F
DownloadVisualize
BU of 6w7f by Molmil
Structure of EED bound to inhibitor 5285
Descriptor: 8-(6-cyclopropylpyridin-3-yl)-N-[(5-fluoro-2,3-dihydro-1-benzofuran-4-yl)methyl]-1-(methylsulfonyl)imidazo[1,5-c]pyrimidin-5-amine, GLYCEROL, Polycomb protein EED
Authors:Petrunak, E.M, Stuckey, J.A.
Deposit date:2020-03-19
Release date:2020-07-08
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:EEDi-5285: An Exceptionally Potent, Efficacious, and Orally Active Small-Molecule Inhibitor of Embryonic Ectoderm Development.
J.Med.Chem., 63, 2020
5TRF
DownloadVisualize
BU of 5trf by Molmil
MDM2 in complex with SAR405838
Descriptor: (2'S,3R,4'S,5'R)-6-chloro-4'-(3-chloro-2-fluorophenyl)-2'-(2,2-dimethylpropyl)-N-(trans-4-hydroxycyclohexyl)-2-oxo-1,2-dihydrospiro[indole-3,3'-pyrrolidine]-5'-carboxamide, E3 ubiquitin-protein ligase Mdm2, GLYCEROL, ...
Authors:Meagher, J.L, Stuckey, J.A.
Deposit date:2016-10-26
Release date:2016-11-09
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:SAR405838: an optimized inhibitor of MDM2-p53 interaction that induces complete and durable tumor regression.
Cancer Res., 74, 2014
5U9T
DownloadVisualize
BU of 5u9t by Molmil
The Tris-thiolate Zn(II)S3Cl Binding Site Engineered by D-Cysteine Ligands in de Novo Three-stranded Coiled Coil Environment
Descriptor: ACETATE ION, CHLORIDE ION, POLYETHYLENE GLYCOL (N=34), ...
Authors:Ruckthong, L, Peacock, A.F.A, Stuckey, J.A, Pecoraro, V.L.
Deposit date:2016-12-18
Release date:2017-04-26
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:d-Cysteine Ligands Control Metal Geometries within De Novo Designed Three-Stranded Coiled Coils.
Chemistry, 23, 2017
5UOO
DownloadVisualize
BU of 5uoo by Molmil
BRD4 bromodomain 2 in complex with CD161
Descriptor: 7-(3,5-dimethyl-1,2-oxazol-4-yl)-6-methoxy-2-methyl-4-(quinolin-4-yl)-9H-pyrimido[4,5-b]indole, Bromodomain-containing protein 4
Authors:Meagher, J.L, Stuckey, J.A.
Deposit date:2017-02-01
Release date:2017-05-17
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Structure-Based Discovery of 4-(6-Methoxy-2-methyl-4-(quinolin-4-yl)-9H-pyrimido[4,5-b]indol-7-yl)-3,5-dimethylisoxazole (CD161) as a Potent and Orally Bioavailable BET Bromodomain Inhibitor.
J. Med. Chem., 60, 2017
5T20
DownloadVisualize
BU of 5t20 by Molmil
Crystal Structure of Tarin Lectin bound to Trimannose
Descriptor: 1,2-ETHANEDIOL, Lectin, alpha-D-mannopyranose, ...
Authors:Pereira, P.R, Meagher, J.L, Stuckey, J.A.
Deposit date:2016-08-22
Release date:2016-09-14
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:High-resolution crystal structures of Colocasia esculenta tarin lectin.
Glycobiology, 27, 2017

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon