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PDB: 349 件

4J94
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Crystal structure of MycP1 from the ESX-1 type VII secretion system
分子名称: Membrane-anchored mycosin mycp1
著者Solomonson, M, Wasney, G.A, Watanabe, N, Gruninger, R.J, Prehna, G, Strynadka, N.C.J.
登録日2013-02-15
公開日2013-05-01
最終更新日2013-07-03
実験手法X-RAY DIFFRACTION (1.857 Å)
主引用文献Structure of the Mycosin-1 Protease from the Mycobacterial ESX-1 Protein Type VII Secretion System.
J.Biol.Chem., 288, 2013
4KPG
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Crystal structure of MycP1 from the ESX-1 type VII secretion system
分子名称: Membrane-anchored mycosin mycp1
著者Solomonson, M, Wasney, G.A, Watanabe, N, Gruninger, R.J, Prehna, G, Strynadka, N.C.J.
登録日2013-05-13
公開日2013-05-22
最終更新日2013-07-03
実験手法X-RAY DIFFRACTION (2.148 Å)
主引用文献Structure of the Mycosin-1 Protease from the Mycobacterial ESX-1 Protein Type VII Secretion System.
J.Biol.Chem., 288, 2013
2FFF
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Open Form of a Class A Transpeptidase Domain
分子名称: NICKEL (II) ION, penicillin-binding protein 1B
著者Lovering, A.L, Strynadka, N.C.J.
登録日2005-12-19
公開日2006-06-20
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.23 Å)
主引用文献Structural analysis of an "open" form of PBP1B from Streptococcus pneumoniae.
Protein Sci., 15, 2006
4XP8
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Structure of EtgA D60N mutant
分子名称: EtgA protein
著者Burkinshaw, B.J, Worrall, L.J, Strynadka, N.C.J.
登録日2015-01-16
公開日2015-02-18
最終更新日2020-01-08
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Structural Analysis of a Specialized Type III Secretion System Peptidoglycan-cleaving Enzyme.
J.Biol.Chem., 290, 2015
5BO8
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Structure of human sialyltransferase ST8SiaIII
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CITRIC ACID, ...
著者Volkers, G, Worrall, L, Strynadka, N.C.J.
登録日2015-05-27
公開日2015-07-15
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structure of human ST8SiaIII sialyltransferase provides insight into cell-surface polysialylation.
Nat.Struct.Mol.Biol., 22, 2015
5TCP
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Near-atomic resolution cryo-EM structure of the periplasmic domains of PrgH and PrgK
分子名称: Lipoprotein PrgK, Protein PrgH
著者Worrall, L.J, Hong, C, Vuckovic, M, Bergeron, J.R.C, Huang, R.K, Yu, Z, Strynadka, N.C.J.
登録日2016-09-15
公開日2016-12-21
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Near-atomic-resolution cryo-EM analysis of the Salmonella T3S injectisome basal body.
Nature, 540, 2016
5T9C
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Crystal structure of B. subtilis 168 GlpQ in complex with glycerol-3-phosphate (1 hour soak)
分子名称: CALCIUM ION, Glycerophosphoryl diester phosphodiesterase, PHOSPHATE ION, ...
著者Li, F.K.K, Strynadka, N.C.J.
登録日2016-09-09
公開日2016-11-02
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Identification of Two Phosphate Starvation-induced Wall Teichoic Acid Hydrolases Provides First Insights into the Degradative Pathway of a Key Bacterial Cell Wall Component.
J. Biol. Chem., 291, 2016
5BO6
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Structure of human sialyltransferase ST8SiaIII in complex with CDP
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Volkers, G, Worrall, L, Strynadka, N.C.J.
登録日2015-05-27
公開日2015-07-15
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Structure of human ST8SiaIII sialyltransferase provides insight into cell-surface polysialylation.
Nat.Struct.Mol.Biol., 22, 2015
5BO9
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Structure of human sialyltransferase ST8SiaIII in complex with CMP-3FNeu5Ac and Sia-6S-LacNAc
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Volkers, G, Worrall, L, Strynadka, N.C.J.
登録日2015-05-27
公開日2015-07-15
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of human ST8SiaIII sialyltransferase provides insight into cell-surface polysialylation.
Nat.Struct.Mol.Biol., 22, 2015
5BO7
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Structure of human sialyltransferase ST8SiaIII in complex with CTP
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Volkers, G, Worrall, L, Strynadka, N.C.J.
登録日2015-05-27
公開日2015-07-15
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structure of human ST8SiaIII sialyltransferase provides insight into cell-surface polysialylation.
Nat.Struct.Mol.Biol., 22, 2015
5N0H
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Crystal structure of NDM-1 in complex with hydrolyzed meropenem - new refinement
分子名称: (2S,3R)-2-[(2S,3R)-1,3-bis(oxidanyl)-1-oxidanylidene-butan-2-yl]-4-[(3S,5S)-5-(dimethylcarbamoyl)pyrrolidin-3-yl]sulfan yl-3-methyl-2,3-dihydro-1H-pyrrole-5-carboxylic acid, GLYCEROL, Metallo-beta-lactamase type 2, ...
著者Raczynska, J.E, Shabalin, I.G, Jaskolski, M, Minor, W, Wlodawer, A, King, D.T, Strynadka, N.C.J.
登録日2017-02-03
公開日2017-04-05
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A close look onto structural models and primary ligands of metallo-beta-lactamases.
Drug Resist. Updat., 40, 2018
5N0I
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Crystal structure of NDM-1 in complex with beta-mercaptoethanol - new refinement
分子名称: BETA-MERCAPTOETHANOL, CHLORIDE ION, GLYCEROL, ...
著者Raczynska, J.E, Shabalin, I.G, Jaskolski, M, Minor, W, Wlodawer, A, King, D.T, Strynadka, N.C.J.
登録日2017-02-03
公開日2017-04-05
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献A close look onto structural models and primary ligands of metallo-beta-lactamases.
Drug Resist. Updat., 40, 2018
2F2H
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Structure of the YicI thiosugar Michaelis complex
分子名称: 3[N-MORPHOLINO]PROPANE SULFONIC ACID, 4-NITROPHENYL 6-THIO-6-S-ALPHA-D-XYLOPYRANOSYL-BETA-D-GLUCOPYRANOSIDE, GLYCEROL, ...
著者Kim, Y.-W, Lovering, A.L, Strynadka, N.C.J, Withers, S.G.
登録日2005-11-16
公開日2006-02-28
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Expanding the Thioglycoligase Strategy to the Synthesis of alpha-linked Thioglycosides Allows Structural Investigation of the Parent Enzyme/Substrate Complex
J.Am.Chem.Soc., 128, 2006
7UZ2
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Structure of beta-glycosidase from Sulfolobus solfataricus in complex with C5a-fluoro-valienide.
分子名称: (1R,2S,3R,4R)-5-fluoro-6-(hydroxymethyl)cyclohex-5-ene-1,2,3,4-tetrol, Beta-galactosidase
著者Danby, P.M, Jeong, A, Sim, L, Sweeney, R.P, Wardman, J.F, Geissner, A, Worrall, L.J, Strynadka, N.C.J, Withers, S.G.
登録日2022-05-08
公開日2023-04-05
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Vinyl Halide-Modified Unsaturated Cyclitols are Mechanism-Based Glycosidase Inhibitors.
Angew.Chem.Int.Ed.Engl., 62, 2023
7UZ1
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Structure of beta-glycosidase from Sulfolobus solfataricus in complex with C5a-bromo-valienide.
分子名称: (1R,2S,3R,4R)-5-bromo-6-(hydroxymethyl)cyclohex-5-ene-1,2,3,4-tetrol, 1,2-ETHANEDIOL, Beta-galactosidase
著者Danby, P.M, Jeong, A, Sim, L, Sweeney, R.P, Wardman, J.F, Karimi, R, Geissner, A, Worrall, L.J, Strynadka, N.C.J, Withers, S.G.
登録日2022-05-08
公開日2023-04-05
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Vinyl Halide-Modified Unsaturated Cyclitols are Mechanism-Based Glycosidase Inhibitors.
Angew.Chem.Int.Ed.Engl., 62, 2023
2OSX
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Endo-glycoceramidase II from Rhodococcus sp.: Ganglioside GM3 Complex
分子名称: Endoglycoceramidase II, GLYCEROL, N-((E,2S,3R)-1,3-DIHYDROXYOCTADEC-4-EN-2-YL)PALMITAMIDE, ...
著者Caines, M.E.C, Strynadka, N.C.J.
登録日2007-02-06
公開日2007-02-27
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Structural and Mechanistic Analyses of endo-Glycoceramidase II, a Membrane-associated Family 5 Glycosidase in the Apo and GM3 Ganglioside-bound Forms.
J.Biol.Chem., 282, 2007
2OSW
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Endo-glycoceramidase II from Rhodococcus sp.
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Endoglycoceramidase II, SODIUM ION
著者Caines, M.E.C, Strynadka, N.C.J.
登録日2007-02-06
公開日2007-02-27
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural and Mechanistic Analyses of endo-Glycoceramidase II, a Membrane-associated Family 5 Glycosidase in the Apo and GM3 Ganglioside-bound Forms.
J.Biol.Chem., 282, 2007
2OYK
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Endo-glycoceramidase II from Rhodococcus sp.: cellobiose-like isofagomine complex
分子名称: (3R,4R,5R)-3-hydroxy-5-(hydroxymethyl)piperidin-4-yl beta-D-glucopyranoside, Endoglycoceramidase II, GLYCEROL, ...
著者Caines, M.E.C, Strynadka, N.C.J.
登録日2007-02-22
公開日2007-03-06
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The structural basis of glycosidase inhibition by five-membered iminocyclitols: the clan a glycoside hydrolase endoglycoceramidase as a model system.
Angew.Chem.Int.Ed.Engl., 46, 2007
2QF5
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High resolution structure of the major periplasmic domain from the cell shape-determining filament MreC (monoclinic form)
分子名称: Cell shape determining protein MreC
著者Lovering, A.L, Strynadka, N.C.J.
登録日2007-06-26
公開日2007-08-07
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.23 Å)
主引用文献High-resolution Structure of the Major Periplasmic Domain from the Cell Shape-determining Filament MreC.
J.Mol.Biol., 372, 2007
2QF4
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High resolution structure of the major periplasmic domain from the cell shape-determining filament MreC (orthorhombic form)
分子名称: 1,2-ETHANEDIOL, Cell shape determining protein MreC, SULFATE ION
著者Lovering, A.L, Strynadka, N.C.J.
登録日2007-06-26
公開日2007-08-07
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献High-resolution Structure of the Major Periplasmic Domain from the Cell Shape-determining Filament MreC.
J.Mol.Biol., 372, 2007
4WJ2
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Mycobacterial protein
分子名称: Antigen MTB48
著者Solomonson, M, Strynadka, N.C.J.
登録日2014-09-29
公開日2015-02-25
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of EspB from the ESX-1 type VII secretion system and insights into its export mechanism.
Structure, 23, 2015
4S2J
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OXA-48 in complex with Avibactam at pH 6.5
分子名称: (2S,5R)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamide, Beta-lactamase
著者King, D.T, Strynadka, N.C.J.
登録日2015-01-20
公開日2015-02-25
最終更新日2017-11-22
実験手法X-RAY DIFFRACTION (2.54 Å)
主引用文献Molecular Mechanism of Avibactam-Mediated beta-Lactamase Inhibition.
ACS Infect Dis, 1, 2015
4S2O
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OXA-10 in complex with Avibactam
分子名称: (2S,5R)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamide, Beta-lactamase OXA-10, COBALT (II) ION
著者King, D.T, Strynadka, N.C.J.
登録日2015-01-21
公開日2015-02-25
最終更新日2017-11-22
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Molecular Mechanism of Avibactam-Mediated beta-Lactamase Inhibition.
ACS Infect Dis, 1, 2015
4WJ1
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Crystal structure of EspB from the ESX-1 type VII secretion system
分子名称: Antigen MTB48, Mycobacterial protein
著者Solomonson, M, Strynadka, N.C.J.
登録日2014-09-29
公開日2015-02-25
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.415 Å)
主引用文献Structure of EspB from the ESX-1 type VII secretion system and insights into its export mechanism.
Structure, 23, 2015
4S2N
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OXA-48 in complex with Avibactam at pH 8.5
分子名称: (2S,5R)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamide, Beta-lactamase
著者King, D.T, Strynadka, N.C.J.
登録日2015-01-21
公開日2015-02-25
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Molecular Mechanism of Avibactam-Mediated beta-Lactamase Inhibition.
ACS Infect Dis, 1, 2015

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