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PDB: 360 results

2MKY
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BU of 2mky by Molmil
Structure of the PrgK first periplasmic domain
Descriptor: Pathogenicity 1 island effector protein
Authors:Bergeron, J, Mcintosh, L, Strynadka, N.
Deposit date:2014-02-14
Release date:2014-10-29
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:The Modular Structure of the Inner-Membrane Ring Component PrgK Facilitates Assembly of the Type III Secretion System Basal Body.
Structure, 23, 2015
2LV4
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BU of 2lv4 by Molmil
ZirS C-terminal Domain
Descriptor: Putative outer membrane or exported protein
Authors:Prehna, G, Li, Y, Stoynov, N, Okon, M, Vukovic, M, Mcintosh, L.P, Foster, L.J, Finlay, B, Strynadka, N.C.J.
Deposit date:2012-06-28
Release date:2012-08-22
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The zinc regulated antivirulence pathway of salmonella is a multiprotein immunoglobulin adhesion system.
J.Biol.Chem., 287, 2012
1ERO
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X-RAY CRYSTAL STRUCTURE OF TEM-1 BETA LACTAMASE IN COMPLEX WITH A DESIGNED BORONIC ACID INHIBITOR (1R)-2-PHENYLACETAMIDO-2-(3-CARBOXYPHENYL)ETHYL BORONIC ACID
Descriptor: (1R)-2-PHENYLACETAMIDO-2-(3-CARBOXYPHENYL)ETHYL BORONIC ACID, TEM-1 BETA-LACTAMASE
Authors:Ness, S, Martin, R, Kindler, A.M, Paetzel, M, Gold, M, Jones, J.B, Strynadka, N.C.J.
Deposit date:2000-04-06
Release date:2000-05-10
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure-based design guides the improved efficacy of deacylation transition state analogue inhibitors of TEM-1 beta-Lactamase(,).
Biochemistry, 39, 2000
1K0W
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BU of 1k0w by Molmil
CRYSTAL STRUCTURE OF L-RIBULOSE-5-PHOSPHATE 4-EPIMERASE
Descriptor: L-RIBULOSE 5 PHOSPHATE 4-EPIMERASE, ZINC ION
Authors:Luo, Y, Samuel, J, Mosimann, S.C, Lee, J.E, Strynadka, N.C.J.
Deposit date:2001-09-21
Release date:2003-01-28
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The structure of L-ribulose-5-phosphate 4-epimerase: an aldolase-like platform for epimerization
Biochemistry, 40, 2001
1F00
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BU of 1f00 by Molmil
CRYSTAL STRUCTURE OF C-TERMINAL 282-RESIDUE FRAGMENT OF ENTEROPATHOGENIC E. COLI INTIMIN
Descriptor: INTIMIN
Authors:Luo, Y, Frey, E.A, Pfuetzner, R.A, Creagh, A.L, Knoechel, D.G, Haynes, C.A, Finlay, B.B, Strynadka, N.C.J.
Deposit date:2000-05-12
Release date:2000-07-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of enteropathogenic Escherichia coli intimin-receptor complex.
Nature, 405, 2000
1F02
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CRYSTAL STRUCTURE OF C-TERMINAL 282-RESIDUE FRAGMENT OF INTIMIN IN COMPLEX WITH TRANSLOCATED INTIMIN RECEPTOR (TIR) INTIMIN-BINDING DOMAIN
Descriptor: INTIMIN, TRANSLOCATED INTIMIN RECEPTOR
Authors:Luo, Y, Frey, E.A, Pfuetzner, R.A, Creagh, A.L, Knoechel, D.G, Haynes, C.A, Finlay, B.B, Strynadka, N.C.J.
Deposit date:2000-05-14
Release date:2000-07-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of enteropathogenic Escherichia coli intimin-receptor complex.
Nature, 405, 2000
1YJ7
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BU of 1yj7 by Molmil
Crystal structure of enteropathogenic E.coli (EPEC) type III secretion system protein EscJ
Descriptor: GLYCEROL, PHOSPHATE ION, escJ
Authors:Yip, C.K, Kimbrough, T.G, Felise, H.B, Vuckovic, M, Thomas, N.A, Pfuetzner, R.A, Frey, E.A, Finlay, B.B, Miller, S.I, Strynadka, N.C.J.
Deposit date:2005-01-13
Release date:2005-06-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural characterization of the molecular platform for type III secretion system assembly.
Nature, 435, 2005
1FOF
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BU of 1fof by Molmil
CRYSTAL STRUCTURE OF THE CLASS D BETA-LACTAMASE OXA-10
Descriptor: BETA LACTAMASE OXA-10, COBALT (II) ION, SULFATE ION
Authors:Paetzel, M, Danel, F, de Castro, L, Mosimann, S.C, Page, M.G.P, Strynadka, N.C.J.
Deposit date:2000-08-28
Release date:2000-10-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the class D beta-lactamase OXA-10.
Nat.Struct.Biol., 7, 2000
1ERQ
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BU of 1erq by Molmil
X-RAY CRYSTAL STRUCTURE OF TEM-1 BETA LACTAMASE IN COMPLEX WITH A DESIGNED BORONIC ACID INHIBITOR (1R)-1-ACETAMIDO-2-(3-CARBOXY-2-HYDROXYPHENYL)ETHYL BORONIC ACID
Descriptor: 1(R)-1-ACETAMIDO-2-(3-CARBOXY-2-HYDROXYPHENYL)ETHYL BORONIC ACID, TEM-1 BETA-LACTAMASE
Authors:Ness, S, Martin, R, Kindler, A.M, Paetzel, M, Gold, M, Jones, J.B, Strynadka, N.C.J.
Deposit date:2000-04-06
Release date:2000-05-10
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure-based design guides the improved efficacy of deacylation transition state analogue inhibitors of TEM-1 beta-Lactamase(,).
Biochemistry, 39, 2000
2OSW
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BU of 2osw by Molmil
Endo-glycoceramidase II from Rhodococcus sp.
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Endoglycoceramidase II, SODIUM ION
Authors:Caines, M.E.C, Strynadka, N.C.J.
Deposit date:2007-02-06
Release date:2007-02-27
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural and Mechanistic Analyses of endo-Glycoceramidase II, a Membrane-associated Family 5 Glycosidase in the Apo and GM3 Ganglioside-bound Forms.
J.Biol.Chem., 282, 2007
1G9R
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BU of 1g9r by Molmil
CRYSTAL STRUCTURE OF GALACTOSYLTRANSFERASE LGTC IN COMPLEX WITH MN AND UDP-2F-GALACTOSE
Descriptor: ACETIC ACID, GLYCOSYL TRANSFERASE, MANGANESE (II) ION, ...
Authors:Persson, K, Hoa, D.L, Diekelmann, M, Wakarchuk, W.W, Withers, S.G, Strynadka, N.C.J.
Deposit date:2000-11-27
Release date:2001-02-14
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the retaining galactosyltransferase LgtC from Neisseria meningitidis in complex with donor and acceptor sugar analogs.
Nat.Struct.Biol., 8, 2001
1GA8
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BU of 1ga8 by Molmil
CRYSTAL STRUCTURE OF GALACOSYLTRANSFERASE LGTC IN COMPLEX WITH DONOR AND ACCEPTOR SUGAR ANALOGS.
Descriptor: 4-deoxy-beta-D-xylo-hexopyranose-(1-4)-beta-D-glucopyranose, GALACTOSYL TRANSFERASE LGTC, MANGANESE (II) ION, ...
Authors:Persson, K, Ly, H.D, Diekelmann, M, Wakarchuk, W.W, Withers, S.G, Strynadka, N.C.J.
Deposit date:2000-11-29
Release date:2001-02-14
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the retaining galactosyltransferase LgtC from Neisseria meningitidis in complex with donor and acceptor sugar analogs.
Nat.Struct.Biol., 8, 2001
2OYK
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BU of 2oyk by Molmil
Endo-glycoceramidase II from Rhodococcus sp.: cellobiose-like isofagomine complex
Descriptor: (3R,4R,5R)-3-hydroxy-5-(hydroxymethyl)piperidin-4-yl beta-D-glucopyranoside, Endoglycoceramidase II, GLYCEROL, ...
Authors:Caines, M.E.C, Strynadka, N.C.J.
Deposit date:2007-02-22
Release date:2007-03-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The structural basis of glycosidase inhibition by five-membered iminocyclitols: the clan a glycoside hydrolase endoglycoceramidase as a model system.
Angew.Chem.Int.Ed.Engl., 46, 2007
1G68
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BU of 1g68 by Molmil
PSE-4 CARBENICILLINASE, WILD TYPE
Descriptor: BETA-LACTAMASE PSE-4, SULFATE ION
Authors:Lim, D, Sanschagrin, F, Passmore, L, De Castro, L, Levesque, R.C, Strynadka, N.C.J.
Deposit date:2000-11-03
Release date:2001-02-21
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Insights into the molecular basis for the carbenicillinase activity of PSE-4 beta-lactamase from crystallographic and kinetic studies.
Biochemistry, 40, 2001
2OYM
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BU of 2oym by Molmil
Endo-glycoceramidase II from Rhodococcus sp.: five-membered iminocyclitol complex
Descriptor: Endoglycoceramidase II, N-{[(2R,3R,4R,5R)-3,4-DIHYDROXY-5-(HYDROXYMETHYL)PYRROLIDIN-2-YL]METHYL}-4-(DIMETHYLAMINO)BENZAMIDE, SODIUM ION
Authors:Caines, M.E.C, Strynadka, N.C.J.
Deposit date:2007-02-22
Release date:2007-03-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:The structural basis of glycosidase inhibition by five-membered iminocyclitols: the clan a glycoside hydrolase endoglycoceramidase as a model system.
Angew.Chem.Int.Ed.Engl., 46, 2007
1G6A
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BU of 1g6a by Molmil
PSE-4 CARBENICILLINASE, R234K MUTANT
Descriptor: BETA-LACTAMASE PSE-4, SULFATE ION
Authors:Lim, D, Sanschagrin, F, Passmore, L, De Castro, L, Levesque, R.C, Strynadka, N.C.J.
Deposit date:2000-11-03
Release date:2001-02-21
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Insights into the molecular basis for the carbenicillinase activity of PSE-4 beta-lactamase from crystallographic and kinetic studies.
Biochemistry, 40, 2001
1DLI
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BU of 1dli by Molmil
THE FIRST STRUCTURE OF UDP-GLUCOSE DEHYDROGENASE (UDPGDH) REVEALS THE CATALYTIC RESIDUES NECESSARY FOR THE TWO-FOLD OXIDATION
Descriptor: GLYCEROL, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SULFATE ION, ...
Authors:Campbell, R.E, Mosimann, S.C, van de Rijn, I, Tanner, M.E, Strynadka, N.C.J.
Deposit date:1999-12-09
Release date:2000-05-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:The first structure of UDP-glucose dehydrogenase reveals the catalytic residues necessary for the two-fold oxidation.
Biochemistry, 39, 2000
2LQV
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YebF
Descriptor: Protein yebF
Authors:Prehna, G, Zhang, G, Gong, X, Duszyk, M, Okon, M, Mcintosh, L.P, Weiner, J.H, Strynadka, N.C.J.
Deposit date:2012-03-16
Release date:2012-06-13
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:A Protein Export Pathway Involving Escherichia coli Porins.
Structure, 20, 2012
2OBL
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Structural and biochemical analysis of a prototypical ATPase from the type III secretion system of pathogenic bacteria
Descriptor: ACETATE ION, CALCIUM ION, EscN, ...
Authors:Zarivach, R, Vuckovic, M, Deng, W, Finlay, B.B, Strynadka, N.C.J.
Deposit date:2006-12-19
Release date:2007-01-30
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural analysis of a prototypical ATPase from the type III secretion system.
Nat.Struct.Mol.Biol., 14, 2007
2OLV
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BU of 2olv by Molmil
Structural Insight Into the Transglycosylation Step Of Bacterial Cell Wall Biosynthesis : Donor Ligand Complex
Descriptor: MOENOMYCIN, Penicillin-binding protein 2
Authors:Lovering, A.L, De Castro, L, Lim, D, Strynadka, N.C.J.
Deposit date:2007-01-19
Release date:2007-03-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural insight into the transglycosylation step of bacterial cell-wall biosynthesis.
Science, 315, 2007
2OBM
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BU of 2obm by Molmil
Structural and biochemical analysis of a prototypical ATPase from the type III secretion system of pathogenic bacteria
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CALCIUM ION, EscN
Authors:Zarivach, R, Vuckovic, M, Deng, W, Finlay, B.B, Strynadka, N.C.J.
Deposit date:2006-12-19
Release date:2007-01-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural analysis of a prototypical ATPase from the type III secretion system.
Nat.Struct.Mol.Biol., 14, 2007
2OYL
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BU of 2oyl by Molmil
Endo-glycoceramidase II from Rhodococcus sp.: cellobiose-like imidazole complex
Descriptor: (5R,6R,7R,8S)-7,8-dihydroxy-5-(hydroxymethyl)-5,6,7,8-tetrahydroimidazo[1,2-a]pyridin-6-yl beta-D-glucopyranoside, Endoglycoceramidase II, GLYCEROL, ...
Authors:Caines, M.E.C, Strynadka, N.C.J.
Deposit date:2007-02-22
Release date:2007-03-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The structural basis of glycosidase inhibition by five-membered iminocyclitols: the clan a glycoside hydrolase endoglycoceramidase as a model system.
Angew.Chem.Int.Ed.Engl., 46, 2007
2OSY
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BU of 2osy by Molmil
Endo-glycoceramidase II from Rhodococcus sp.: Lactosyl-Enzyme Intermediate
Descriptor: Endoglycoceramidase II, SODIUM ION, beta-D-galactopyranose-(1-4)-alpha-D-glucopyranose
Authors:Caines, M.E.C, Strynadka, N.C.J.
Deposit date:2007-02-06
Release date:2007-02-27
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and Mechanistic Analyses of endo-Glycoceramidase II, a Membrane-associated Family 5 Glycosidase in the Apo and GM3 Ganglioside-bound Forms.
J.Biol.Chem., 282, 2007
2QF5
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High resolution structure of the major periplasmic domain from the cell shape-determining filament MreC (monoclinic form)
Descriptor: Cell shape determining protein MreC
Authors:Lovering, A.L, Strynadka, N.C.J.
Deposit date:2007-06-26
Release date:2007-08-07
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:High-resolution Structure of the Major Periplasmic Domain from the Cell Shape-determining Filament MreC.
J.Mol.Biol., 372, 2007
7KGM
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BU of 7kgm by Molmil
C. rodentium YcbB - ertapenem complex
Descriptor: (4R,5S)-3-({(3S,5S)-5-[(3-carboxyphenyl)carbamoyl]pyrrolidin-3-yl}sulfanyl)-5-[(1S,2R)-1-formyl-2-hydroxypropyl]-4-methyl-4,5-dihydro-1H-pyrrole-2-carboxylic acid, Putative exported protein
Authors:Caveney, N.A, Strynadka, N.C.J.
Deposit date:2020-10-17
Release date:2020-11-25
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural and Cellular Insights into the l,d-Transpeptidase YcbB as a Therapeutic Target in Citrobacter rodentium, Salmonella Typhimurium, and Salmonella Typhi Infections.
Antimicrob.Agents Chemother., 65, 2021

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