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PDB: 60 件

6O3H
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Icosahedral reconstruction of the thermophilic bacteriophage P74-26 capsid
分子名称: Major head protein, P74-26 Head Decoration Protein
著者Stone, N.P, Demo, G, Agnello, E, Kelch, B.A.
登録日2019-02-26
公開日2019-07-24
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Principles for enhancing virus capsid capacity and stability from a thermophilic virus capsid structure.
Nat Commun, 10, 2019
6BL5
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Head decoration protein from the hyperthermophilic phage P74-26
分子名称: Head decoration protein
著者Stone, N.P, Hilbert, B.J, Hidalgo, D, Halloran, K.T, Kelch, B.A.
登録日2017-11-09
公開日2018-02-21
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献A Hyperthermophilic Phage Decoration Protein Suggests Common Evolutionary Origin with Herpesvirus Triplex Proteins and an Anti-CRISPR Protein.
Structure, 26, 2018
6VVO
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Structure of the human clamp loader (Replication Factor C, RFC) bound to the sliding clamp (Proliferating Cell Nuclear Antigen, PCNA)
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ...
著者Gaubitz, C, Liu, X, Stone, N.P, Kelch, B.A.
登録日2020-02-18
公開日2020-02-26
最終更新日2020-03-25
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structure of the human clamp loader bound to the sliding clamp: a further twist on AAA+ mechanism
Biorxiv, 2020
6V1I
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Cryo-EM reconstruction of the thermophilic bacteriophage P74-26 small terminase- symmetric
分子名称: Small terminase protein
著者Hayes, J.A, Hilbert, B.J, Gaubitz, C, Stone, N.P, Kelch, B.A.
登録日2019-11-20
公開日2020-02-12
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献A thermophilic phage uses a small terminase protein with a fixed helix-turn-helix geometry.
J.Biol.Chem., 295, 2020
4ZNJ
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Thermus Phage P74-26 Large Terminase ATPase domain mutant R139A (I 2 3 space group)
分子名称: Phage terminase large subunit, SULFATE ION
著者Hilbert, B.J, Hayes, J.A, Stone, N.P, Duffy, C.M, Kelch, B.A.
登録日2015-05-04
公開日2015-07-08
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.532 Å)
主引用文献Structure and mechanism of the ATPase that powers viral genome packaging.
Proc.Natl.Acad.Sci.USA, 112, 2015
7TID
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Structure of the yeast clamp loader (Replication Factor C RFC) bound to the sliding clamp (Proliferating Cell Nuclear Antigen PCNA) and primer-template DNA
分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA (5'-D(*AP*GP*AP*CP*AP*CP*TP*AP*CP*GP*AP*GP*TP*AP*CP*AP*TP*A)-3'), DNA (5'-D(P*TP*TP*TP*TP*TP*TP*TP*AP*TP*GP*TP*AP*CP*TP*CP*GP*TP*AP*GP*TP*GP*TP*CP*T)-3'), ...
著者Gaubitz, C, Liu, X, Pajak, J, Stone, N, Hayes, J, Demo, G, Kelch, B.A.
登録日2022-01-13
公開日2022-02-16
最終更新日2024-02-28
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Cryo-EM structures reveal high-resolution mechanism of a DNA polymerase sliding clamp loader.
Elife, 11, 2022
4ZNK
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Thermus Phage P74-26 Large Terminase ATPase domain from (P 32 2 1 space group)
分子名称: Phage terminase large subunit, SULFATE ION
著者Hilbert, B.J, Hayes, J.A, Stone, N.P, Duffy, C.M, Kelch, B.A.
登録日2015-05-04
公開日2015-07-08
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.931 Å)
主引用文献Structure and mechanism of the ATPase that powers viral genome packaging.
Proc.Natl.Acad.Sci.USA, 112, 2015
4ZNI
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Thermus Phage P74-26 Large Terminase ATPase domain (I 2 3 space group)
分子名称: Phage terminase large subunit, SULFATE ION
著者Hilbert, B.J, Hayes, J.A, Stone, N.P, Duffy, C.M, Sankaran, B, Kelch, B.A.
登録日2015-05-04
公開日2015-07-08
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.097 Å)
主引用文献Structure and mechanism of the ATPase that powers viral genome packaging.
Proc.Natl.Acad.Sci.USA, 112, 2015
4ZNL
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Thermus Phage P74-26 Large Terminase ATPase domain bound to ADP Beryllium Fluoride
分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, ...
著者Hilbert, B.J, Hayes, J.A, Stone, N.P, Duffy, C.M, Kelch, B.A.
登録日2015-05-04
公開日2015-07-08
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.068 Å)
主引用文献Structure and mechanism of the ATPase that powers viral genome packaging.
Proc.Natl.Acad.Sci.USA, 112, 2015
7TIC
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Structure of the yeast clamp loader (Replication Factor C RFC) bound to the sliding clamp (Proliferating Cell Nuclear Antigen PCNA) in an autoinhibited conformation
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ...
著者Gaubitz, C, Liu, X, Pajak, J, Stone, N, Hayes, J, Demo, G, Kelch, B.A.
登録日2022-01-13
公開日2022-02-16
最終更新日2024-02-28
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Cryo-EM structures reveal high-resolution mechanism of a DNA polymerase sliding clamp loader.
Elife, 11, 2022
7TI8
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Structure of the yeast clamp loader (Replication Factor C RFC) bound to the open sliding clamp (Proliferating Cell Nuclear Antigen PCNA)
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ...
著者Gaubitz, C, Liu, X, Pajak, J, Stone, N, Hayes, J, Demo, G, Kelch, B.A.
登録日2022-01-13
公開日2022-02-16
最終更新日2024-02-28
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Cryo-EM structures reveal high-resolution mechanism of a DNA polymerase sliding clamp loader.
Elife, 11, 2022
7TKU
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BU of 7tku by Molmil
Structure of the yeast clamp loader (Replication Factor C RFC) bound to the open sliding clamp (Proliferating Cell Nuclear Antigen PCNA)
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ...
著者Gaubitz, C, Liu, X, Pajak, J, Stone, N, Hayes, J, Demo, G, Kelch, B.A.
登録日2022-01-17
公開日2022-02-16
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Cryo-EM structures reveal high-resolution mechanism of a DNA polymerase sliding clamp loader.
Elife, 11, 2022
7TIB
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BU of 7tib by Molmil
Structure of the yeast clamp loader (Replication Factor C RFC) bound to the open sliding clamp (Proliferating Cell Nuclear Antigen PCNA) and primer-template DNA
分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA (5'-D(*AP*GP*AP*CP*AP*CP*TP*AP*CP*GP*AP*GP*TP*AP*CP*AP*TP*A)-3'), DNA (5'-D(P*TP*TP*TP*TP*TP*TP*TP*AP*TP*GP*TP*AP*CP*TP*CP*GP*TP*AP*GP*TP*GP*TP*CP*T)-3'), ...
著者Gaubitz, C, Liu, X, Pajak, J, Stone, N, Hayes, J, Demo, G, Kelch, B.A.
登録日2022-01-13
公開日2022-02-16
最終更新日2024-02-28
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Cryo-EM structures reveal high-resolution mechanism of a DNA polymerase sliding clamp loader.
Elife, 11, 2022
7THV
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BU of 7thv by Molmil
Structure of the yeast clamp loader (Replication Factor C RFC) bound to the sliding clamp (Proliferating Cell Nuclear Antigen PCNA) in an autoinhibited conformation
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ...
著者Gaubitz, C, Liu, X, Pajak, J, Stone, N, Hayes, J, Demo, G, Kelch, B.A.
登録日2022-01-12
公開日2022-02-16
最終更新日2024-02-28
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Cryo-EM structures reveal high-resolution mechanism of a DNA polymerase sliding clamp loader.
Elife, 11, 2022
7THJ
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BU of 7thj by Molmil
Structure of the yeast clamp loader (Replication Factor C RFC) bound to the sliding clamp (Proliferating Cell Nuclear Antigen PCNA) in an autoinhibited conformation
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ...
著者Gaubitz, C, Liu, X, Pajak, J, Stone, N, Hayes, J, Demo, G, Kelch, B.A.
登録日2022-01-11
公開日2022-02-16
最終更新日2024-02-28
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Cryo-EM structures reveal high-resolution mechanism of a DNA polymerase sliding clamp loader.
Elife, 11, 2022
7ZQ8
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VelcroVax tandem HBcAg with SUMO-Affimer inserted at MIR (T=4 VLP)
分子名称: VelcroVax tandem HBcAg with SUMO-Affimer inserted at MIR
著者Kingston, N.J, Grehan, K, Snowden, J.S, Alzahrani, J, Ranson, N.A, Rowlands, D.J, Stonehouse, N.J.
登録日2022-04-29
公開日2023-01-18
最終更新日2023-08-09
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献VelcroVax: a "Bolt-On" Vaccine Platform for Glycoprotein Display.
Msphere, 8, 2023
7ZQA
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BU of 7zqa by Molmil
VelcroVax tandem HBcAg with SUMO-Affimer inserted at MIR (T=3* VLP)
分子名称: VelcroVax tandem HBcAg with SUMO-Affimer inserted at MIR
著者Kingston, N.J, Grehan, K, Snowden, J.S, Alzahrani, J, Ranson, N.A, Rowlands, D.J, Stonehouse, N.J.
登録日2022-04-29
公開日2023-01-18
最終更新日2023-08-09
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献VelcroVax: a "Bolt-On" Vaccine Platform for Glycoprotein Display.
Msphere, 8, 2023
5TGE
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BU of 5tge by Molmil
Thermus Phage P74-26 Large Terminase Nuclease Domain
分子名称: Phage terminase large subunit
著者Hilbert, B.J, Hayes, J.A, Stone, N.P, Kelch, B.A.
登録日2016-09-27
公開日2017-01-25
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献The large terminase DNA packaging motor grips DNA with its ATPase domain for cleavage by the flexible nuclease domain.
Nucleic Acids Res., 45, 2017
1U1Y
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Crystal structure of a complex between WT bacteriophage MS2 coat protein and an F5 aptamer RNA stemloop with 2aminopurine substituted at the-10 position
分子名称: 5'-R(*CP*CP*GP*GP*(2PR)P*GP*GP*AP*UP*CP*AP*CP*CP*AP*CP*GP*G)-3', Coat protein
著者Horn, W.T, Convery, M.A, Stonehouse, N.J, Adams, C.J, Liljas, L, Phillips, S.E, Stockley, P.G.
登録日2004-07-16
公開日2004-12-07
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献The crystal structure of a high affinity RNA stem-loop complexed with the bacteriophage MS2 capsid: further challenges in the modeling of ligand-RNA interactions.
Rna, 10, 2004
8C6D
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Production of antigenically stable enterovirus A71 virus-like particles in Pichia pastoris as a vaccine candidate.
分子名称: (2S,3R,4E)-2-aminooctadec-4-ene-1,3-diol, Genome polyprotein, Genome polyprotein (Fragment)
著者Kingston, N.J, Snowden, J.S, Stonehouse, N.J, Rowlands, D.J, Hogle, J.M.
登録日2023-01-11
公開日2023-02-22
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (2.4 Å)
主引用文献Production of antigenically stable enterovirus A71 virus-like particles in Pichia pastoris as a vaccine candidate.
Biorxiv, 2023
5MSF
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MS2 PROTEIN CAPSID/RNA COMPLEX
分子名称: 5'-R(*CP*CP*GP*GP*AP*GP*GP*AP*UP*CP*AP*CP*CP*AP*CP*GP*GP*G)-3', MS2 PROTEIN CAPSID
著者Rowsell, S, Stonehouse, N.J, Convery, M.A, Adams, C.J, Ellington, A.D, Hirao, I, Peabody, D.S, Stockley, P.G, Phillips, S.E.V.
登録日1998-05-15
公開日1998-11-11
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structures of a series of RNA aptamers complexed to the same protein target.
Nat.Struct.Biol., 5, 1998
6S6L
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Cryo-EM structure of murine norovirus (MNV-1)
分子名称: Capsid protein
著者Snowden, J.S, Hurdiss, D.L, Adeyemi, O.O, Ranson, N.A, Herod, M.R, Stonehouse, N.J.
登録日2019-07-03
公開日2020-05-13
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Dynamics in the murine norovirus capsid revealed by high-resolution cryo-EM.
Plos Biol., 18, 2020
6MSF
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F6 APTAMER MS2 COAT PROTEIN COMPLEX
分子名称: PROTEIN (MS2 PROTEIN CAPSID), RNA (5'-R(*CP*AP*GP*UP*CP*AP*CP*UP*GP*G)-3'), RNA (5'-R(*CP*CP*AP*CP*AP*GP*UP*CP*AP*CP*UP*GP*GP*G)-3')
著者Convery, M.A, Rowsell, S, Stonehouse, N.J, Ellington, A.D, Hirao, I, Murray, J.B, Peabody, D.S, Phillips, S.E.V, Stockley, P.G.
登録日1998-01-06
公開日1998-07-08
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of an RNA aptamer-protein complex at 2.8 A resolution.
Nat.Struct.Biol., 5, 1998
1AQ4
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STRUCTURE OF A MS2 COAT PROTEIN MUTANT IN COMPLEX WITH AN RNA OPERATOR
分子名称: PROTEIN(BACTERIOPHAGE MS2 COAT PROTEIN), RNA (5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP*UP*AP*CP*CP*CP*AP*U P*GP*U)-3')
著者Van Den Worm, S.H, Stonehouse, N.J, Valegard, K, Liljas, L.
登録日1997-08-06
公開日1997-12-24
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structures of MS2 coat protein mutants in complex with wild-type RNA operator fragments.
Nucleic Acids Res., 26, 1998
1AQ3
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BACTERIOPHAGE MS2 CAPSID PROTEIN/RNA COMPLEX
分子名称: PROTEIN (BACTERIOPHAGE MS2 COAT PROTEIN), RNA (5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP*UP*AP*CP*CP*CP*AP*U P*GP*U)-3')
著者Van Den Worm, S, Stonehouse, N, Valegard, K, Liljas, L.
登録日1997-08-06
公開日1997-12-24
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structures of MS2 coat protein mutants in complex with wild-type RNA operator fragments.
Nucleic Acids Res., 26, 1998

 

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