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PDB: 301 件

4DA4
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Structure of mouse DNMT1 (731-1602) bound to hemimethylated CpG DNA
分子名称: CITRIC ACID, DNA (cytosine-5)-methyltransferase 1, DNA_LOWER_STRAND, ...
著者Song, J, Patel, D.J.
登録日2012-01-12
公開日2012-02-22
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure-Based Mechanistic Insights into DNMT1-Mediated Maintenance DNA Methylation.
Science, 335, 2012
1Y4O
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BU of 1y4o by Molmil
Solution structure of a mouse cytoplasmic Roadblock/LC7 dynein light chain
分子名称: Dynein light chain 2A, cytoplasmic
著者Song, J, Tyler, R.C, Lee, M.S, Tyler, E.M, Markley, J.L, Center for Eukaryotic Structural Genomics (CESG)
登録日2004-12-01
公開日2005-01-18
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of isoform 1 of Roadblock/LC7, a light chain in the dynein complex.
J.Mol.Biol., 354, 2005
5W3T
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BU of 5w3t by Molmil
Crystal structure of PopP2 in complex with IP6
分子名称: GLYCEROL, INOSITOL HEXAKISPHOSPHATE, PopP2 protein
著者Song, J, Zhang, Z.M.
登録日2017-06-08
公開日2017-08-09
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Mechanism of host substrate acetylation by a YopJ family effector.
Nat Plants, 3, 2017
9BAZ
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BU of 9baz by Molmil
CryoEM structure of DIM2-HP1 complex
分子名称: DNA (cytosine-5-)-methyltransferase, Heterochromatin protein one, S-ADENOSYL-L-HOMOCYSTEINE, ...
著者Song, J, Shao, Z.
登録日2024-04-05
公開日2024-07-24
実験手法ELECTRON MICROSCOPY (2.76 Å)
主引用文献CryoEM structure of DIM2-HP1 complex
To Be Published
9BAQ
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BU of 9baq by Molmil
CryoEM structure of DIM2-HP1-H3K9me3-DNA complex
分子名称: DNA (5'-D(*AP*CP*TP*AP*CP*T)-R(P*(PYO))-D(P*CP*TP*CP*CP*TP*CP*CP*TP*AP*CP*T)-3'), DNA (5'-D(*AP*GP*TP*AP*GP*GP*AP*GP*GP*AP*GP*GP*AP*GP*TP*AP*GP*T)-3'), DNA (cytosine-5-)-methyltransferase, ...
著者Song, J, Shao, Z.
登録日2024-04-04
公開日2024-07-24
実験手法ELECTRON MICROSCOPY (2.79 Å)
主引用文献CryoEM structure of DIM2-HP1-H3K9me3-DNA complex
To Be Published
9BAP
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BU of 9bap by Molmil
CryoEM structure of Apo-DIM2
分子名称: DNA (cytosine-5-)-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE, ZINC ION
著者Song, J, Shao, Z.
登録日2024-04-04
公開日2024-07-24
実験手法ELECTRON MICROSCOPY (2.88 Å)
主引用文献CryoEM structure of Apo-DIM2
To Be Published
8DS8
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BU of 8ds8 by Molmil
Crystal structure of human TNRC18 BAH domain in complex with H3K9me3 peptide
分子名称: Histone H3.1, Trinucleotide repeat-containing gene 18 protein
著者Song, J.K, Lu, J.W.
登録日2022-07-21
公開日2023-08-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献TNRC18 engages H3K9me3 to mediate silencing of endogenous retrotransposons.
Nature, 623, 2023
6VIL
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BU of 6vil by Molmil
Crystal structure of mouse BAHCC1 BAH domain in complex with H3K27me3
分子名称: BAH and coiled-coil domain-containing protein 1, Histone H3.1
著者Song, J, Lu, J.
登録日2020-01-13
公開日2020-09-16
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.301 Å)
主引用文献BAHCC1 binds H3K27me3 via a conserved BAH module to mediate gene silencing and oncogenesis.
Nat.Genet., 52, 2020
1U04
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BU of 1u04 by Molmil
Crystal structure of full length Argonaute from Pyrococcus furiosus
分子名称: hypothetical protein PF0537
著者Song, J.J, Smith, S.K, Hannon, G.J, Joshua-Tor, L.
登録日2004-07-12
公開日2004-08-17
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Crystal Structure of Argonaute and Its Implications for RISC Slicer Activity
Science, 305, 2004
4J2J
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BU of 4j2j by Molmil
Crystal structure of AXH domain complex with Capicua
分子名称: Ataxin-1, Protein capicua homolog
著者Song, J.-J, Kim, E.
登録日2013-02-04
公開日2013-04-03
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural basis of protein complex formation and reconfiguration by polyglutamine disease protein Ataxin-1 and Capicua
Genes Dev., 27, 2013
1TIZ
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BU of 1tiz by Molmil
Solution Structure of a Calmodulin-Like Calcium-Binding Domain from Arabidopsis thaliana
分子名称: calmodulin-related protein, putative
著者Song, J, Zhao, Q, Thao, S, Frederick, R.O, Markley, J.L, Center for Eukaryotic Structural Genomics (CESG)
登録日2004-06-02
公開日2004-08-10
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Letter to the Editor: Solution structure of a calmodulin-like calcium-binding domain from Arabidopsis thaliana
J.Biomol.NMR, 30, 2004
4J2L
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BU of 4j2l by Molmil
Crystal Structure of AXH domain complexed with Capicua
分子名称: Ataxin-1, Protein capicua homolog
著者Song, J.-J, Kim, E.
登録日2013-02-04
公開日2013-04-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Structural basis of protein complex formation and reconfiguration by polyglutamine disease protein Ataxin-1 and Capicua
Genes Dev., 27, 2013
1XOY
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BU of 1xoy by Molmil
Solution structure of At3g04780.1, an Arabidopsis ortholog of the C-terminal domain of human thioredoxin-like protein
分子名称: hypothetical protein At3g04780.1
著者Song, J, Robert, C.T, Lee, M.S, Markley, J.L, Center for Eukaryotic Structural Genomics (CESG)
登録日2004-10-07
公開日2004-10-12
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of At3g04780.1-des15, an Arabidopsis thaliana ortholog of the C-terminal domain of human thioredoxin-like protein.
Protein Sci., 14, 2005
4Q57
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BU of 4q57 by Molmil
Crystal structure of the plectin 1a actin-binding domain/N-terminal domain of calmodulin complex
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ...
著者Song, J.-G, Kostan, J, Grishkovskaya, I, Djinovic-Carugo, K.
登録日2014-04-16
公開日2014-07-23
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of the plectin 1a actin-binding domain/N-terminal domain of calmodulin complex
To be Published
1R6Z
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BU of 1r6z by Molmil
The Crystal Structure of the Argonaute2 PAZ domain (as a MBP fusion)
分子名称: Chimera of Maltose-binding periplasmic protein and Argonaute 2, NICKEL (II) ION, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Song, J.J, Liu, J, Tolia, N.H, Schneiderman, J, Smith, S.K, Martienssen, R.A, Hannon, G.J, Joshua-Tor, L.
登録日2003-10-17
公開日2004-01-13
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献The crystal structure of the Argonaute2 PAZ domain reveals an RNA binding motif in RNAi effector complexes.
Nat.Struct.Biol., 10, 2003
3WW0
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BU of 3ww0 by Molmil
Crystal structure of F97A mutant, a new nuclear transport receptor of Hsp70
分子名称: Protein Hikeshi
著者Song, J, Kose, S, Watanabe, A, Son, S.Y, Choi, S, Hong, R.H, Yamashita, E, Park, I.Y, Imamoto, N, Lee, S.J.
登録日2014-06-12
公開日2015-03-25
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural and functional analysis of Hikeshi, a new nuclear transport receptor of Hsp70s
Acta Crystallogr.,Sect.D, 71, 2015
1T0G
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BU of 1t0g by Molmil
Hypothetical protein At2g24940.1 from Arabidopsis thaliana has a cytochrome b5 like fold
分子名称: cytochrome b5 domain-containing protein
著者Song, J, Vinarov, D.A, Tyler, E.M, Shahan, M.N, Tyler, R.C, Markley, J.L, Center for Eukaryotic Structural Genomics (CESG)
登録日2004-04-08
公開日2004-04-13
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Hypothetical protein At2g24940.1 from Arabidopsis thaliana has a cytochrome b5 like fold
J.Biomol.NMR, 30, 2004
1M8B
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BU of 1m8b by Molmil
Solution structure of the C State of turkey ovomucoid at pH 2.5
分子名称: Ovomucoid
著者Song, J, Laskowski Jr, M, Qasim, M.A, Markley, J.L.
登録日2002-07-24
公開日2002-09-04
最終更新日2021-10-27
実験手法SOLUTION NMR
主引用文献Two conformational states of Turkey ovomucoid third domain at low pH: three-dimensional structures, internal dynamics, and interconversion kinetics and thermodynamics.
Biochemistry, 42, 2003
1M8C
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BU of 1m8c by Molmil
SOLUTION STRUCTURE OF THE T State OF TURKEY OVOMUCOID AT PH 2.5
分子名称: Ovomucoid
著者Song, J, Laskowski Jr, M, Qasim, M.A, Markley, J.L.
登録日2002-07-24
公開日2002-09-04
最終更新日2021-10-27
実験手法SOLUTION NMR
主引用文献Two conformational states of Turkey ovomucoid third domain at low pH: three-dimensional structures, internal dynamics, and interconversion kinetics and thermodynamics.
Biochemistry, 42, 2003
3C9C
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BU of 3c9c by Molmil
Structural Basis of Histone H4 Recognition by p55
分子名称: CADMIUM ION, Chromatin assembly factor 1 p55 subunit, Histone H4, ...
著者Song, J.J, Garlick, J.D, Kingston, R.E.
登録日2008-02-15
公開日2008-05-13
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural basis of histone H4 recognition by p55.
Genes Dev., 22, 2008
3C99
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Structural Basis of Histone H4 Recognition by p55
分子名称: CADMIUM ION, Chromatin assembly factor 1 p55 subunit
著者Song, J.J, Garlick, J.D, Kingston, R.E.
登録日2008-02-15
公開日2008-05-13
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural basis of histone H4 recognition by p55.
Genes Dev., 22, 2008
4DOW
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BU of 4dow by Molmil
Structure of mouse ORC1 BAH domain bound to H4K20me2
分子名称: Histone H4, Origin recognition complex subunit 1
著者Song, J, Patel, D.J.
登録日2012-02-10
公開日2012-03-07
最終更新日2012-04-11
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献The BAH domain of ORC1 links H4K20me2 to DNA replication licensing and Meier-Gorlin syndrome.
Nature, 484, 2012
4DOV
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BU of 4dov by Molmil
Structure of free mouse ORC1 BAH domain
分子名称: Origin recognition complex subunit 1
著者Song, J, Patel, D.J.
登録日2012-02-10
公開日2012-03-07
最終更新日2012-04-11
実験手法X-RAY DIFFRACTION (1.696 Å)
主引用文献The BAH domain of ORC1 links H4K20me2 to DNA replication licensing and Meier-Gorlin syndrome.
Nature, 484, 2012
2ASQ
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BU of 2asq by Molmil
Solution Structure of SUMO-1 in Complex with a SUMO-binding Motif (SBM)
分子名称: Protein inhibitor of activated STAT2, Small ubiquitin-related modifier 1
著者Song, J, Zhang, Z, Hu, W, Chen, Y.
登録日2005-08-23
公開日2005-10-11
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Small Ubiquitin-like Modifier (SUMO) Recognition of a SUMO Binding Motif: A reversal of the bound orientation
J.Biol.Chem., 280, 2005
3PT6
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BU of 3pt6 by Molmil
Crystal structure of mouse DNMT1(650-1602) in complex with DNA
分子名称: DNA (5'-D(*CP*CP*TP*GP*CP*GP*GP*AP*GP*GP*CP*TP*CP*AP*CP*GP*GP*GP*A)-3'), DNA (5'-D(*TP*CP*CP*CP*GP*TP*GP*AP*GP*CP*CP*TP*CP*CP*GP*CP*AP*GP*G)-3'), DNA (cytosine-5)-methyltransferase 1, ...
著者Song, J, Patel, D.J.
登録日2010-12-02
公開日2010-12-29
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structure of DNMT1-DNA complex reveals a role for autoinhibition in maintenance DNA methylation.
Science, 331, 2011

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