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PDB: 165 results

2ED6
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Crystal Structure of Envelope Protein VP28 from White Spot Syndrome Virus (WSSV)
Descriptor: 25kDa structural protein VP25
Authors:Hew, C.L, Sivaraman, J, Tang, X.H.
Deposit date:2007-02-14
Release date:2007-06-05
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of major envelope proteins VP26 and VP28 from white spot syndrome virus shed light on their evolutionary relationship
J.Virol., 81, 2007
4E53
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Calmodulin and Nm peptide complex
Descriptor: Calmodulin, Linker, IQ motif of Neuromodulin
Authors:Kumar, V, Sivaraman, J.
Deposit date:2012-03-13
Release date:2013-03-20
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Structural basis for the interaction of unstructured neuron specific substrates neuromodulin and neurogranin with calmodulin
Sci Rep, 3, 2013
4E50
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Calmodulin and Ng peptide complex
Descriptor: Calmodulin, Linker, IQ motif of Neurogranin
Authors:Kumar, V, Sivaraman, J.
Deposit date:2012-03-13
Release date:2013-03-20
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis for the interaction of unstructured neuron specific substrates neuromodulin and neurogranin with calmodulin
Sci Rep, 3, 2013
8K70
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Structural basis for the distinct roles of non-conserved Pro116 and conserved Tyr124 of BCH domain of yeast p50RhoGAP
Descriptor: Putative Rho GTPase-activating protein C1565.02c, TETRAETHYLENE GLYCOL
Authors:Shankar, S, Sivaraman, J.
Deposit date:2023-07-26
Release date:2024-05-29
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Structural basis for the distinct roles of non-conserved Pro116 and conserved Tyr124 of BCH domain of yeast p50RhoGAP.
Cell.Mol.Life Sci., 81, 2024
2GML
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Crystal Structure of Catalytic Domain of E.coli RluF
Descriptor: Ribosomal large subunit pseudouridine synthase F
Authors:Sunita, S, Zhenxing, H, Swaathi, J, Cygler, M, Matte, A, Sivaraman, J.
Deposit date:2006-04-06
Release date:2006-07-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Domain Organization and Crystal Structure of the Catalytic Domain of E.coli RluF, a Pseudouridine Synthase that Acts on 23S rRNA
J.Mol.Biol., 359, 2006
5JYP
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BU of 5jyp by Molmil
Allosteric inhibition of Kidney Isoform of Glutaminase
Descriptor: 2-phenyl-~{N}-[5-[(1~{S},3~{S})-3-[5-(2-phenylethanoylamino)-1,3,4-thiadiazol-2-yl]cyclohexyl]-1,3,4-thiadiazol-2-yl]ethanamide, Glutaminase kidney isoform, mitochondrial
Authors:Ramachandran, S, Sivaraman, J.
Deposit date:2016-05-15
Release date:2016-08-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.74 Å)
Cite:Structural basis for exploring the allosteric inhibition of human kidney type glutaminase.
Oncotarget, 7, 2016
5XWR
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Crystal Structure of RBBP4-peptide complex
Descriptor: Histone-binding protein RBBP4, MET-SER-ARG-ARG-LYS-GLN-ALA-LYS-PRO-GLN-HIS-ILE
Authors:Jobichen, C, Lui, B.H, Daniel, G.T, Sivaraman, J.
Deposit date:2017-06-30
Release date:2018-07-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Targeting cancer addiction for SALL4 by shifting its transcriptome with a pharmacologic peptide.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
3HJ6
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Structure of Halothermothrix orenii fructokinase (FRK)
Descriptor: Fructokinase
Authors:Chua, T.K, Seetharaman, J, Kasprzak, J.M, Ng, C, Patel, B.K, Love, C, Bujnicki, J.M, Sivaraman, J.
Deposit date:2009-05-21
Release date:2010-06-09
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of a fructokinase homolog from Halothermothrix orenii
J.Struct.Biol., 171, 2010
2EDM
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BU of 2edm by Molmil
Crystal Structure of Envelope Protein VP26 from White Spot Syndrome Virus (WSSV)
Descriptor: 22kDa structural protein VP22
Authors:Hew, C.L, Tang, X.H, Sivaraman, J.
Deposit date:2007-02-14
Release date:2007-06-05
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structures of Major Envelope Proteins VP26 and VP28 from White Spot Syndrome Virus Shed Light on Their Evolutionary Relationship
J.Virol., 81, 2007
6A2V
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BU of 6a2v by Molmil
Crystal structure of Hcp protein
Descriptor: Type VI secretion system tube protein Hcp
Authors:Jobichen, C, Sivaraman, J.
Deposit date:2018-06-13
Release date:2018-09-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.588 Å)
Cite:Structural basis for the pathogenesis of Campylobacter jejuni Hcp1, a structural and effector protein of the Type VI Secretion System.
FEBS J., 285, 2018
4ZQY
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Ringhalexin from hemachatus haemachatus: A novel inhibitor of extrinsic tenase complex
Descriptor: Ringhalexin
Authors:Jobichen, C, Sivaraman, J.
Deposit date:2015-05-11
Release date:2016-05-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.9515 Å)
Cite:Ringhalexin from Hemachatus haemachatus: A novel inhibitor of extrinsic tenase complex.
Sci Rep, 6, 2016
5BN5
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Structural basis for a unique ATP synthase core complex from Nanoarcheaum equitans
Descriptor: NEQ263, SULFATE ION, V-type ATP synthase alpha chain
Authors:Mohanty, S, Jobichen, C, Chichili, V.P.R, Sivaraman, J.
Deposit date:2015-05-25
Release date:2015-09-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.997 Å)
Cite:Structural Basis for a Unique ATP Synthase Core Complex from Nanoarcheaum equitans
J.Biol.Chem., 290, 2015
5BN3
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Structure of a unique ATP synthase NeqA-NeqB in complex with ADP from Nanoarcheaum equitans
Descriptor: 1,4-DIETHYLENE DIOXIDE, ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, ...
Authors:Mohanty, S, Jobichen, C, Chichili, V.P.R, Sivaraman, J.
Deposit date:2015-05-25
Release date:2015-09-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Basis for a Unique ATP Synthase Core Complex from Nanoarcheaum equitans
J.Biol.Chem., 290, 2015
5H7S
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BU of 5h7s by Molmil
Structural basis of the flanking zinc-finger motifs crucial for the E3 ligase activity of the LNX1 RING domain
Descriptor: E3 ubiquitin-protein ligase LNX, Ubiquitin-conjugating enzyme E2 N, Ubiquitin-like 1, ...
Authors:Nayak, D, Sivaraman, J.
Deposit date:2016-11-21
Release date:2017-11-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.49 Å)
Cite:Structure of LNX1:Ubc13~Ubiquitin Complex Reveals the Role of Additional Motifs for the E3 Ligase Activity of LNX1.
J. Mol. Biol., 430, 2018
5H7R
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Structural basis of the flanking zinc-finger motifs crucial for the E3 ligase activity of the LNX1 RING domain
Descriptor: E3 ubiquitin-protein ligase LNX, ZINC ION
Authors:Nayak, D, Sivaraman, J.
Deposit date:2016-11-21
Release date:2017-11-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of LNX1:Ubc13~Ubiquitin Complex Reveals the Role of Additional Motifs for the E3 Ligase Activity of LNX1.
J. Mol. Biol., 430, 2018
1FC4
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BU of 1fc4 by Molmil
2-AMINO-3-KETOBUTYRATE COA LIGASE
Descriptor: 2-AMINO-3-KETOBUTYRATE CONENZYME A LIGASE, 2-AMINO-3-KETOBUTYRIC ACID, PYRIDOXAL-5'-PHOSPHATE
Authors:Schmidt, A, Matte, A, Li, Y, Sivaraman, J, Larocque, R, Schrag, J.D, Smith, C, Sauve, V, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
Deposit date:2000-07-17
Release date:2001-05-02
Last modified:2018-01-31
Method:X-RAY DIFFRACTION (2 Å)
Cite:Three-dimensional structure of 2-amino-3-ketobutyrate CoA ligase from Escherichia coli complexed with a PLP-substrate intermediate: inferred reaction mechanism.
Biochemistry, 40, 2001
3GGQ
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BU of 3ggq by Molmil
Dimerization of Hepatitis E Virus Capsid Protein E2s Domain is Essential for Virus-Host Interaction
Descriptor: BROMIDE ION, Capsid protein
Authors:Li, S.W, Tang, X.H, Seetharaman, J, Yang, C.Y, Gu, Y, Zhang, J, Du, H.L, Shih, J.W.K, Hew, C.L, Sivaraman, J, Xia, N.S.
Deposit date:2009-03-02
Release date:2009-08-25
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Dimerization of hepatitis E virus capsid protein E2s domain is essential for virus-host interaction
Plos Pathog., 5, 2009
7EQX
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BU of 7eqx by Molmil
Crystal structure of an Aedes aegypti procarboxypeptidase B1
Descriptor: Carboxypeptidase B, ZINC ION
Authors:Choong, Y.K, Gavor, E, Jobichen, C, Sivaraman, J.
Deposit date:2021-05-05
Release date:2021-11-10
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Structure of Aedes aegypti procarboxypeptidase B1 and its binding with Dengue virus for controlling infection.
Life Sci Alliance, 5, 2022
2GJI
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BU of 2gji by Molmil
NMR solution structure of VP9 from White Spot Syndrome Virus
Descriptor: wsv230
Authors:Liu, Y, Wu, J.L, Song, J.X, Sivaraman, J, Hew, C.L.
Deposit date:2006-03-30
Release date:2006-09-19
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Identification of a Novel Nonstructural Protein, VP9, from White Spot Syndrome Virus: Its Structure Reveals a Ferredoxin Fold with Specific Metal Binding Sites
J.Virol., 80, 2006
2GJ2
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BU of 2gj2 by Molmil
Crystal Structure of VP9 from White Spot Syndrome Virus
Descriptor: CADMIUM ION, wsv230
Authors:Liu, Y, Wu, J.L, Song, J.X, Sivaraman, J, Hew, C.L.
Deposit date:2006-03-30
Release date:2006-09-19
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Identification of a Novel Nonstructural Protein, VP9, from White Spot Syndrome Virus: Its Structure Reveals a Ferredoxin Fold with Specific Metal Binding Sites
J.Virol., 80, 2006
5XXZ
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Crystal structure of a serine protease from Streptococcus species
Descriptor: CALCIUM ION, Chemokine protease C, SULFATE ION
Authors:Jobichen, C, Sivaraman, J.
Deposit date:2017-07-05
Release date:2018-08-08
Last modified:2018-09-26
Method:X-RAY DIFFRACTION (3.085 Å)
Cite:Structure of ScpC, a virulence protease fromStreptococcus pyogenes, reveals the functional domains and maturation mechanism.
Biochem. J., 475, 2018
5XYA
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BU of 5xya by Molmil
Crystal structure of a serine protease from Streptococcus species
Descriptor: 4-(2-AMINOETHYL)BENZENESULFONYL FLUORIDE, CALCIUM ION, Chemokine protease C, ...
Authors:Jobichen, C, Sivaraman, J.
Deposit date:2017-07-06
Release date:2018-08-08
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of ScpC, a virulence protease fromStreptococcus pyogenes, reveals the functional domains and maturation mechanism.
Biochem. J., 475, 2018
5XYR
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Crystal structure of a serine protease from Streptococcus species
Descriptor: CALCIUM ION, CHLORIDE ION, Chemokine protease C, ...
Authors:Jobichen, C, Sivaraman, J.
Deposit date:2017-07-10
Release date:2018-08-08
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of ScpC, a virulence protease fromStreptococcus pyogenes, reveals the functional domains and maturation mechanism.
Biochem. J., 475, 2018
5BN4
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BU of 5bn4 by Molmil
Structure of a unique ATP synthase NeqA-NeqB in complex with ANP from Nanoarcheaum equitans
Descriptor: MAGNESIUM ION, NEQ263, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Mohanty, S, Jobichen, C, Chichili, V.P.R, Sivaraman, J.
Deposit date:2015-05-25
Release date:2015-09-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.699 Å)
Cite:Structural Basis for a Unique ATP Synthase Core Complex from Nanoarcheaum equitans
J.Biol.Chem., 290, 2015
5BO5
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Structure of a unique ATP synthase subunit NeqB from Nanoarcheaum equitans
Descriptor: MAGNESIUM ION, NEQ263, SULFATE ION
Authors:Mohanty, S, Jobichen, C, Chichili, V.P.R, Sivaraman, J.
Deposit date:2015-05-27
Release date:2015-09-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.808 Å)
Cite:Structural Basis for a Unique ATP Synthase Core Complex from Nanoarcheaum equitans
J.Biol.Chem., 290, 2015

221051

数据于2024-06-12公开中

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