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PDB: 449 件
1UIE
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ANALYSIS OF THE STABILIZATION OF HEN LYSOZYME WITH THE HELIX DIPOLE AND CHARGED SIDE CHAINS
分子名称: LYSOZYME
著者Motoshima, H, Ohmura, T, Ueda, T, Imoto, T.
登録日1996-11-26
公開日1997-11-26
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Analysis of the stability of mutant lysozymes at position 15 using X-ray crystallography.
J.Biochem.(Tokyo), 122, 1997
1UIC
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BU of 1uic by Molmil
ANALYSIS OF THE STABILIZATION OF HEN LYSOZYME WITH THE HELIX DIPOLE AND CHARGED SIDE CHAINS
分子名称: LYSOZYME
著者Motoshima, H, Ohmura, T, Ueda, T, Imoto, T.
登録日1996-11-26
公開日1997-11-26
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Analysis of the stability of mutant lysozymes at position 15 using X-ray crystallography.
J.Biochem.(Tokyo), 122, 1997
1UIA
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BU of 1uia by Molmil
ANALYSIS OF THE STABILIZATION OF HEN LYSOZYME WITH THE HELIX DIPOLE AND CHARGED SIDE CHAINS
分子名称: LYSOZYME
著者Motoshima, H, Ohmura, T, Ueda, T, Imoto, T.
登録日1996-11-26
公開日1997-11-26
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Fluctuations in free or substrate-complexed lysozyme and a mutant of it detected on x-ray crystallography and comparison with those detected on NMR.
J.Biochem.(Tokyo), 131, 2002
1UIG
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BU of 1uig by Molmil
ANALYSIS OF THE STABILIZATION OF HEN LYSOZYME WITH THE HELIX DIPOLE AND CHARGED SIDE CHAINS
分子名称: LYSOZYME
著者Motoshima, H, Ohmura, T, Ueda, T, Imoto, T.
登録日1996-11-26
公開日1997-11-26
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Analysis of the stability of mutant lysozymes at position 15 using X-ray crystallography.
J.Biochem.(Tokyo), 122, 1997
8JF5
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BU of 8jf5 by Molmil
Crystal structure of Lysine Specific Demethylase 1 (LSD1) with TAS1440
分子名称: 4-[5-[(3~{R})-3-azanylpyrrolidin-1-yl]carbonyl-2-[2-fluoranyl-4-(2-methyl-2-oxidanyl-propyl)phenyl]phenyl]-2-fluoranyl-benzenecarbonitrile, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ...
著者Fukushima, H, Machida, T, Yamashita, S, Suzuki, T.
登録日2023-05-17
公開日2024-05-22
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献TAS1440, a histone H3 competitive LSD1 inhibitor, activates both TGF-beta and notch signaling pathways via INSM1 dissociation in neuroendocrine small cell lung cancer
To Be Published
2ZHR
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BU of 2zhr by Molmil
Crystal structure of BACE1 in complex with OM99-2 at pH 5.0
分子名称: Beta-secretase 1, inhibitor OM99-2
著者Shimizu, H, Nukina, N.
登録日2008-02-08
公開日2008-04-22
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of an active form of BACE1, an enzyme responsible for amyloid beta protein production
Mol.Cell.Biol., 28, 2008
5YD8
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BU of 5yd8 by Molmil
Crystal structure of human PCNA in complex with APIM of human ZRANB3
分子名称: Proliferating cell nuclear antigen, ZRANB3
著者Hashimoto, H, Tagata, R.
登録日2017-09-12
公開日2018-04-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of proliferating cell nuclear antigen (PCNA) bound to an APIM peptide reveals the universality of PCNA interaction.
Acta Crystallogr.,Sect.F, 74, 2018
2ZHV
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BU of 2zhv by Molmil
Crystal structure of BACE1 at pH 7.0
分子名称: Beta-secretase 1
著者Shimizu, H, Nukina, N.
登録日2008-02-08
公開日2008-04-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal structure of an active form of BACE1, an enzyme responsible for amyloid beta protein production
Mol.Cell.Biol., 28, 2008
2ZHU
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Crystal structure of BACE1 at pH 5.0
分子名称: Beta-secretase 1
著者Shimizu, H, Nukina, N.
登録日2008-02-08
公開日2008-04-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of an active form of BACE1, an enzyme responsible for amyloid beta protein production
Mol.Cell.Biol., 28, 2008
2ZHS
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Crystal structure of BACE1 at pH 4.0
分子名称: Beta-secretase 1
著者Shimizu, H, Nukina, N.
登録日2008-02-08
公開日2008-04-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of an active form of BACE1, an enzyme responsible for amyloid beta protein production
Mol.Cell.Biol., 28, 2008
2ZO2
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BU of 2zo2 by Molmil
Mouse NP95 SRA domain non-specific DNA complex
分子名称: DNA (5'-D(*DAP*DAP*DCP*DTP*DGP*DCP*DGP*DCP*DAP*DGP*DTP*DT)-3'), E3 ubiquitin-protein ligase UHRF1, PHOSPHATE ION
著者Hashimoto, H, Horton, J.R, Cheng, X.
登録日2008-05-05
公開日2008-09-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.09 Å)
主引用文献The SRA domain of UHRF1 flips 5-methylcytosine out of the DNA helix
Nature, 455, 2008
2ZO0
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mouse NP95 SRA domain DNA specific complex 1
分子名称: DNA (5'-D(*DGP*DTP*DCP*DAP*DGP*(5CM)P*DGP*DCP*DAP*DAP*DTP*DGP*DG)-3'), DNA (5'-D(*DTP*DCP*DCP*DAP*DTP*DGP*DCP*DGP*DCP*DTP*DGP*DAP*DC)-3'), E3 ubiquitin-protein ligase UHRF1
著者Hashimoto, H, Horton, J.R, Cheng, X.
登録日2008-05-05
公開日2008-09-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献The SRA domain of UHRF1 flips 5-methylcytosine out of the DNA helix
Nature, 455, 2008
2ZHT
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BU of 2zht by Molmil
Crystal structure of BACE1 at pH 4.5
分子名称: Beta-secretase 1
著者Shimizu, H, Nukina, N.
登録日2008-02-08
公開日2008-04-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Crystal structure of an active form of BACE1, an enzyme responsible for amyloid beta protein production
Mol.Cell.Biol., 28, 2008
5XH7
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Crystal structure of the Acidaminococcus sp. BV3L6 Cpf1 RR variant in complex with crRNA and target DNA (TCCA PAM)
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, CRISPR-associated endonuclease Cpf1, ...
著者Nishimasu, H, Yamano, T, Ishitani, R, Nureki, O.
登録日2017-04-19
公開日2017-06-14
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural Basis for the Altered PAM Recognition by Engineered CRISPR-Cpf1
Mol. Cell, 67, 2017
5XH6
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Crystal structure of the Acidaminococcus sp. BV3L6 Cpf1 RVR variant in complex with crRNA and target DNA (TATA PAM)
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, CRISPR-associated endonuclease Cpf1, ...
著者Nishimasu, H, Yamano, T, Ishitani, R, Nureki, O.
登録日2017-04-19
公開日2017-06-14
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural Basis for the Altered PAM Recognition by Engineered CRISPR-Cpf1
Mol. Cell, 67, 2017
2COV
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BU of 2cov by Molmil
Crystal structure of CBM31 from beta-1,3-xylanase
分子名称: beta-1,3-xylanase
著者Hashimoto, H, Tamai, Y, Okazaki, F, Tamaru, Y, Shimizu, T, Araki, T, Sato, M.
登録日2005-05-18
公開日2005-09-13
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献The first crystal structure of a family 31 carbohydrate-binding module with affinity to beta-1,3-xylan
Febs Lett., 579, 2005
2DDD
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BU of 2ddd by Molmil
Unique behavior of a histidine responsible for an engineered green-to-red photoconversion process
分子名称: MAGNESIUM ION, SODIUM ION, photoconvertible fluorescent protein
著者Shimizu, H, Tsutsui, H, Nukina, N, Miyawaki, A.
登録日2006-01-27
公開日2006-03-07
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献The E1 mechanism in photo-induced beta-elimination reactions for green-to-red conversion of fluorescent proteins
Chem.Biol., 16, 2009
2DDC
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BU of 2ddc by Molmil
Unique behavior of a histidine responsible for an engineered green-to-red photoconversion process
分子名称: MAGNESIUM ION, SODIUM ION, photoconvertible fluorescent protein
著者Shimizu, H, Tsutsui, H, Nukina, N, Miyawaki, A.
登録日2006-01-27
公開日2006-03-07
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献The E1 mechanism in photo-induced beta-elimination reactions for green-to-red conversion of fluorescent proteins.
Chem.Biol., 16, 2009
2E2P
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BU of 2e2p by Molmil
Crystal structure of Sulfolobus tokodaii hexokinase in complex with ADP
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ADENOSINE-5'-DIPHOSPHATE, HEXOKINASE, ...
著者Nishimasu, H, Fushinobu, S, Shoun, H, Wakagi, T.
登録日2006-11-15
公開日2007-01-16
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structures of an ATP-dependent hexokinase with broad substrate specificity from the hyperthermophilic archaeon Sulfolobus tokodaii.
J.Biol.Chem., 282, 2007
2E2Q
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Crystal structure of Sulfolobus tokodaii hexokinase in complex with xylose, Mg2+, and ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, HEXOKINASE, MAGNESIUM ION, ...
著者Nishimasu, H, Fushinobu, S, Shoun, H, Wakagi, T.
登録日2006-11-15
公開日2007-01-16
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structures of an ATP-dependent hexokinase with broad substrate specificity from the hyperthermophilic archaeon Sulfolobus tokodaii.
J.Biol.Chem., 282, 2007
2E2N
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Crystal structure of Sulfolobus tokodaii hexokinase in the apo form
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, HEXOKINASE, SULFATE ION
著者Nishimasu, H, Fushinobu, S, Shoun, H, Wakagi, T.
登録日2006-11-15
公開日2007-01-16
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structures of an ATP-dependent hexokinase with broad substrate specificity from the hyperthermophilic archaeon Sulfolobus tokodaii.
J.Biol.Chem., 282, 2007
2E2O
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Crystal structure of Sulfolobus tokodaii hexokinase in complex with glucose
分子名称: HEXOKINASE, beta-D-glucopyranose
著者Nishimasu, H, Fushinobu, S, Shoun, H, Wakagi, T.
登録日2006-11-15
公開日2007-01-16
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal structures of an ATP-dependent hexokinase with broad substrate specificity from the hyperthermophilic archaeon Sulfolobus tokodaii.
J.Biol.Chem., 282, 2007
3W1E
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BU of 3w1e by Molmil
Structure of FlgT, a flagellar basal body component protein
分子名称: Flagella basal-body protein
著者Terashima, H, Sakuma, M, Homma, M, Imada, K.
登録日2012-11-14
公開日2013-04-03
最終更新日2013-08-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Insight into the assembly mechanism in the supramolecular rings of the sodium-driven Vibrio flagellar motor from the structure of FlgT
Proc.Natl.Acad.Sci.USA, 110, 2013
3VUX
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BU of 3vux by Molmil
Crystal structure of A20 ZF7 in complex with linear ubiquitin, form II
分子名称: 1,2-ETHANEDIOL, POTASSIUM ION, Polyubiquitin-C, ...
著者Nishimasu, H, Ishitani, R, Nureki, O.
登録日2012-07-09
公開日2013-02-13
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.699 Å)
主引用文献Specific recognition of linear polyubiquitin by A20 zinc finger 7 is involved in NF-kappaB regulation
Embo J., 31, 2012
3WAW
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BU of 3waw by Molmil
Crystal Structure of Autotaxin in Complex with 2BoA
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Nishimasu, H, Ishitani, R, Nureki, O.
登録日2013-05-09
公開日2013-07-31
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.954 Å)
主引用文献Screening and X-ray Crystal Structure-based Optimization of Autotaxin (ENPP2) Inhibitors, Using a Newly Developed Fluorescence Probe
Acs Chem.Biol., 8, 2013

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