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PDB: 809 results

9BPK
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BU of 9bpk by Molmil
Human light chain ferritin reacted with iron (3 Fe2+ to ferritin monomer ratio). Reconstruction of particles with no nanoparticle
Descriptor: Ferritin light chain
Authors:Sen, S, Nannenga, B.L, Williams, D.
Deposit date:2024-05-07
Release date:2025-05-14
Method:ELECTRON MICROSCOPY (2.1 Å)
Cite:Observation of the Protein-Inorganic Interface of Ferritin by Cryo-Electron Microscopy.
J.Am.Chem.Soc., 147, 2025
9BPI
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BU of 9bpi by Molmil
C-terminus truncated (last two residues) mutant of Human light chain ferritin reacted with Ferrous salt(3 Fe2+ per ferritin subunit) . Reconstruction of particles with one nanoparticle
Descriptor: Ferritin light chain
Authors:Sen, S, Nannenga, B.L, Williams, D.
Deposit date:2024-05-07
Release date:2025-05-14
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Observation of the Protein-Inorganic Interface of Ferritin by Cryo-Electron Microscopy.
J.Am.Chem.Soc., 147, 2025
9BQ5
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BU of 9bq5 by Molmil
C-terminus truncated (last two residues) mutant of Human light chain ferritin reacted with iron (3 Fe2+ to ferritin monomer ratio). Reconstruction of particles with no nanoparticle.
Descriptor: Ferritin light chain
Authors:Sen, S, Nannenga, B.L, Williams, D.
Deposit date:2024-05-09
Release date:2025-05-14
Method:ELECTRON MICROSCOPY (2.36 Å)
Cite:Observation of the Protein-Inorganic Interface of Ferritin by Cryo-Electron Microscopy.
J.Am.Chem.Soc., 147, 2025
9BPJ
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BU of 9bpj by Molmil
Human light chain ferritin reacted with iron (3 Fe2+ to ferritin monomer ratio). Reconstruction of particles with one nanoparticle
Descriptor: Ferritin light chain
Authors:Sen, S, Nannenga, B.L, Williams, D.
Deposit date:2024-05-07
Release date:2025-05-14
Method:ELECTRON MICROSCOPY (2.85 Å)
Cite:Observation of the Protein-Inorganic Interface of Ferritin by Cryo-Electron Microscopy.
J.Am.Chem.Soc., 147, 2025
1RW4
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BU of 1rw4 by Molmil
Nitrogenase Fe protein l127 deletion variant
Descriptor: GLYCEROL, IRON/SULFUR CLUSTER, Nitrogenase iron protein 1
Authors:Sen, S, Igarashi, R, Smith, A, Johnson, M.K, Seefeldt, L.C, Peters, J.W.
Deposit date:2003-12-15
Release date:2004-03-09
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A Conformational Mimic of the MgATP-Bound "On State" of the Nitrogenase Iron Protein.
Biochemistry, 43, 2004
2C8V
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BU of 2c8v by Molmil
Insights into the role of nucleotide-dependent conformational change in nitrogenase catalysis: Structural characterization of the nitrogenase Fe protein Leu127 deletion variant with bound MgATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, FE2/S2 (INORGANIC) CLUSTER, MAGNESIUM ION, ...
Authors:Sen, S, Krishnakumar, A, McClead, J, Johnson, M.K, Seefeldt, L.C, Szilagyi, R.K, Peters, J.W.
Deposit date:2005-12-08
Release date:2006-06-01
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Insights Into the Role of Nucleotide-Dependent Conformational Change in Nitrogenase Catalysis: Structural Characterization of the Nitrogenase Fe Protein Leu127 Deletion Variant with Bound Mgatp.
J.Inorg.Biochem., 100, 2006
2B46
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BU of 2b46 by Molmil
Crystal structure of an engineered uninhibited Bacillus subtilis xylanase in substrate bound state
Descriptor: Endo-1,4-beta-xylanase A, beta-D-xylopyranose-(1-4)-beta-D-xylopyranose
Authors:Sansen, S, Dewilde, M, De Ranter, C.J, Sorensen, J.F, Sibbesen, O, Gebruers, K, Brijs, K, Courtin, C.M, Delcour, J.A, Rabijns, A.
Deposit date:2005-09-22
Release date:2006-09-19
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.215 Å)
Cite:Crystal structure of the Triticum xylanse inhibitor-I in complex with bacillus subtilis xylanase
To be Published
2B45
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Crystal structure of an engineered uninhibited Bacillus subtilis xylanase in free state
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Endo-1,4-beta-xylanase A
Authors:Sansen, S, Dewilde, M, De Ranter, C.J, Sorensen, J.F, Sibbesen, O, Gebruers, K, Brijs, K, Courtin, C.M, Delcour, J.A, Rabijns, A.
Deposit date:2005-09-22
Release date:2006-09-19
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the Triticum xylanse inhibitor-I in complex with bacillus subtilis xylanase
To be Published
1W69
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BU of 1w69 by Molmil
Crystal Structure of Mouse Ribonucleotide Reductase Subunit R2 under Reducing Conditions. A Fully Occupied Dinuclear Iron Cluster and Bound Acetate.
Descriptor: ACETIC ACID, FE (II) ION, RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE M2 CHAIN
Authors:Karlsen, S, Strand, K.R, Kolberg, M, Rohr, A.K, Gorbitz, C.H, Andersson, K.K.
Deposit date:2004-08-16
Release date:2004-08-26
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structural Studies of Changes in the Native Dinuclear Iron Center of Ribonucleotide Reductase Protein R2 from Mouse
J.Biol.Chem., 279, 2004
1W68
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BU of 1w68 by Molmil
Crystal Structure of Mouse Ribonucleotide Reductase Subunit R2 under Oxidizing Conditions. A Fully Occupied Dinuclear Iron Cluster.
Descriptor: MU-OXO-DIIRON, RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE M2 CHAIN
Authors:Karlsen, S, Strand, K.R, Kolberg, M, Rohr, A.K, Gorbitz, C.H, Andersson, K.K.
Deposit date:2004-08-16
Release date:2004-08-26
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structural Studies of Changes in the Native Dinuclear Iron Center of Ribonucleotide Reductase Protein R2 from Mouse
J.Biol.Chem., 279, 2004
5NM0
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BU of 5nm0 by Molmil
Nb36 Ser85Cys with Hg, crystal form 1
Descriptor: MERCURY (II) ION, Nb36
Authors:Hansen, S.B, Andersen, K.R, Laursen, N.S, Andersen, G.R.
Deposit date:2017-04-05
Release date:2017-06-07
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Introducing site-specific cysteines into nanobodies for mercury labelling allows de novo phasing of their crystal structures.
Acta Crystallogr D Struct Biol, 73, 2017
9GQO
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BU of 9gqo by Molmil
Structure of a Ca2+ bound phosphoenzyme intermediate in the inward-to-outward transition of Ca2+-ATPase 1 from Listeria monocytogenes
Descriptor: CALCIUM ION, Calcium-transporting ATPase lmo0841, MAGNESIUM ION
Authors:Hansen, S.B, Flygaard, R.F, Kjaergaard, M, Nissen, P.
Deposit date:2024-09-09
Release date:2024-10-16
Last modified:2025-04-16
Method:ELECTRON MICROSCOPY (3.46 Å)
Cite:Structure of the [Ca]E2P intermediate of Ca 2+ -ATPase 1 from Listeria monocytogenes.
Embo Rep., 26, 2025
5NLU
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BU of 5nlu by Molmil
Structure of Nb36 crystal form 1
Descriptor: SULFATE ION, single domain llama antibody Nb36
Authors:Hansen, S.B, Andersen, K.R, Laursen, N.S, Andersen, G.R.
Deposit date:2017-04-05
Release date:2017-05-31
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.193 Å)
Cite:Introducing site-specific cysteines into nanobodies for mercury labelling allows de novo phasing of their crystal structures.
Acta Crystallogr D Struct Biol, 73, 2017
5NLW
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BU of 5nlw by Molmil
Structure of Nb36 crystal form 2
Descriptor: SULFATE ION, nanobody Nb36
Authors:Hansen, S.B, Andersen, K.R, Laursen, N.S, Andersen, G.R.
Deposit date:2017-04-05
Release date:2017-05-31
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Introducing site-specific cysteines into nanobodies for mercury labelling allows de novo phasing of their crystal structures.
Acta Crystallogr D Struct Biol, 73, 2017
4APD
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BU of 4apd by Molmil
Liraglutide
Descriptor: LIRAGLUTIDE, N-hexadecanoyl-L-glutamic acid
Authors:Ludvigsen, S, Steensgaard, D.B, Thomsen, J.K, Strauss, H, Normann, M.
Deposit date:2012-04-02
Release date:2013-07-10
Last modified:2024-11-06
Method:SOLUTION NMR
Cite:Liraglutide
To be Published
8FW7
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BU of 8fw7 by Molmil
Histone from Bdellovibrio bacteriovorus bound to dsDNA
Descriptor: CBFD_NFYB_HMF domain-containing protein, DNA (5'-D(P*AP*T)-3'), DNA (5'-D(P*CP*AP*T)-3')
Authors:Laursen, S.P, Luger, K.
Deposit date:2023-01-20
Release date:2023-08-30
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Histones with an unconventional DNA-binding mode in vitro are major chromatin constituents in the bacterium Bdellovibrio bacteriovorus.
Nat Microbiol, 8, 2023
8FVX
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BU of 8fvx by Molmil
Histone from Bdellovibrio bacteriovorus
Descriptor: CBFD_NFYB_HMF domain-containing protein
Authors:Laursen, S.P, Luger, K.
Deposit date:2023-01-19
Release date:2023-08-30
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Histones with an unconventional DNA-binding mode in vitro are major chromatin constituents in the bacterium Bdellovibrio bacteriovorus.
Nat Microbiol, 8, 2023
5NML
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BU of 5nml by Molmil
Nb36 Ser85Cys with Hg bound
Descriptor: 1,2-ETHANEDIOL, MERCURY (II) ION, Nanobody Nb36 Ser85Cys
Authors:Hansen, S.B, Andersen, K.R, Laursen, N.S, Andersen, G.R.
Deposit date:2017-04-06
Release date:2017-06-07
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Introducing site-specific cysteines into nanobodies for mercury labelling allows de novo phasing of their crystal structures.
Acta Crystallogr D Struct Biol, 73, 2017
1CPY
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BU of 1cpy by Molmil
SITE-DIRECTED MUTAGENESIS ON (SERINE) CARBOXYPEPTIDASE Y FROM YEAST. THE SIGNIFICANCE OF THR 60 AND MET 398 IN HYDROLYSIS AND AMINOLYSIS REACTIONS
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, SERINE CARBOXYPEPTIDASE
Authors:Sorensen, S.B, Raaschou-Nielsen, M, Mortensen, U, Remington, S.J, Breddam, K.
Deposit date:1995-03-24
Release date:1995-09-15
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Site-Directed Mutagenesis on (Serine) Carboxypeptidase Y from Yeast. The Significance of Thr 60 and met 398 in Hydrolysis and Aminolysis Reactions
J.Am.Chem.Soc., 117, 1995
2R4R
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BU of 2r4r by Molmil
Crystal structure of the human beta2 adrenoceptor
Descriptor: Beta-2 adrenergic receptor, antibody for beta2 adrenoceptor, heavy chain, ...
Authors:Rasmussen, S.G.F, Choi, H.J, Rosenbaum, D.M, Kobilka, T.S, Thian, F.S, Edwards, P.C, Burghammer, M, Ratnala, V.R, Sanishvili, R, Fischetti, R.F, Schertler, G.F, Weis, W.I, Kobilka, B.K.
Deposit date:2007-08-31
Release date:2007-11-06
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Crystal structure of the human beta2 adrenergic G-protein-coupled receptor.
Nature, 450, 2007
6ZPN
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BU of 6zpn by Molmil
Crystal structure of Chaetomium thermophilum Raptor
Descriptor: WD_REPEATS_REGION domain-containing protein
Authors:Imseng, S, Boehm, R, Jakob, R.P, Hall, M.N, Hiller, S, Maier, T.
Deposit date:2020-07-08
Release date:2021-05-19
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:The dynamic mechanism of 4E-BP1 recognition and phosphorylation by mTORC1.
Mol.Cell, 81, 2021
1BXN
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BU of 1bxn by Molmil
THE CRYSTAL STRUCTURE OF RUBISCO FROM ALCALIGENES EUTROPHUS TO 2.7 ANGSTROMS.
Descriptor: PHOSPHATE ION, PROTEIN (RIBULOSE BISPHOSPHATE CARBOXYLASE LARGE CHAIN), PROTEIN (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN)
Authors:Hansen, S, Vollan, V.B, Hough, E, Andersen, K.
Deposit date:1998-10-06
Release date:1999-10-06
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The crystal structure of rubisco from Alcaligenes eutrophus reveals a novel central eight-stranded beta-barrel formed by beta-strands from four subunits.
J.Mol.Biol., 288, 1999
1HLS
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BU of 1hls by Molmil
NMR STRUCTURE OF THE HUMAN INSULIN-HIS(B16)
Descriptor: INSULIN
Authors:Ludvigsen, S, Kaarsholm, N.C.
Deposit date:1995-06-28
Release date:1995-09-15
Last modified:2024-10-23
Method:SOLUTION NMR
Cite:High-resolution structure of an engineered biologically potent insulin monomer, B16 Tyr-->His, as determined by nuclear magnetic resonance spectroscopy.
Biochemistry, 33, 1994
4Y5I
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BU of 4y5i by Molmil
Crystal structure of C-terminal modified Tau peptide-hybrid 126B with 14-3-3sigma
Descriptor: 14-3-3 protein sigma, CHLORIDE ION, Microtubule-associated protein tau
Authors:Leysen, S, Bartel, M, Milroy, L, Brunsveld, L, Ottmann, C.
Deposit date:2015-02-11
Release date:2016-01-13
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Stabilizer-Guided Inhibition of Protein-Protein Interactions.
Angew.Chem.Int.Ed.Engl., 54, 2015
8FY0
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BU of 8fy0 by Molmil
E3:PROTAC:target ternary complex structure (VCB/753b/BCL-xL)
Descriptor: Bcl-2-like protein 1, CACODYLIC ACID, Elongin-B, ...
Authors:Olsen, S.K, Nayak, D, Lv, D, Yuan, Y, Zhang, P, Hu, W, Lv, Z, Sung, P, Hromas, R, Zheng, G, Zhou, D.
Deposit date:2023-01-25
Release date:2024-04-10
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.94 Å)
Cite:Development and crystal structures of a potent second-generation dual degrader of BCL-2 and BCL-xL.
Nat Commun, 15, 2024

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