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9BPK

Human light chain ferritin reacted with iron (3 Fe2+ to ferritin monomer ratio). Reconstruction of particles with no nanoparticle

Summary for 9BPK
Entry DOI10.2210/pdb9bpk/pdb
Related9BPI 9BPJ
EMDB information44780
DescriptorFerritin light chain (1 entity in total)
Functional Keywordsiron oxide binding protein, metal binding protein
Biological sourceHomo sapiens (human)
Total number of polymer chains24
Total formula weight478019.66
Authors
Sen, S.,Nannenga, B.L.,Williams, D. (deposition date: 2024-05-07, release date: 2025-05-14)
Primary citationSen, S.,Thaker, A.,Haymaker, A.,Williams, D.,Chiu, P.L.,Nannenga, B.L.
Observation of the Protein-Inorganic Interface of Ferritin by Cryo-Electron Microscopy.
J.Am.Chem.Soc., 147:3333-3340, 2025
Cited by
PubMed Abstract: Visualizing the structure of the protein-inorganic interface is critically important for a more complete understanding of biomineralization. Unfortunately, there are limited approaches for the direct and detailed study of biomolecules that interact with inorganic materials. Here, we use single-particle cryo-electron microscopy (cryo-EM) to study the protein-nanoparticle (NP) interactions of human light chain ferritin and visualize the high-resolution details of the protein-inorganic interface. In this work, we determined the 2.85 Å structure of human light chain ferritin bound to its native iron oxide NP substrate. The resulting cryo-EM maps confirmed and enhanced previously proposed interactions of the protein with the material along the B-helix and revealed new interaction at the C-terminus of light chain ferritin. This work sheds new light on the mechanisms of ferritin biomineralization and further demonstrates the application of cryo-EM for the study of protein-inorganic systems.
PubMed: 39815632
DOI: 10.1021/jacs.4c13873
PDB entries with the same primary citation
Experimental method
ELECTRON MICROSCOPY (2.1 Å)
Structure validation

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