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PDB: 567 results

2PUE
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BU of 2pue by Molmil
CRYSTAL STRUCTURE OF THE LACI FAMILY MEMBER, PURR, BOUND TO DNA: MINOR GROOVE BINDING BY ALPHA HELICES
Descriptor: ADENINE, DNA (5'-D(*TP*AP*CP*GP*CP*AP*AP*AP*CP*GP*TP*TP*TP*GP*CP*GP*T )-3'), PROTEIN (PURINE REPRESSOR )
Authors:Lu, F, Schumacher, M.A, Arvidson, D.N, Haldimann, A, Wanner, B.L, Zalkin, H, Brennan, R.G.
Deposit date:1997-10-04
Release date:1998-05-06
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure-based redesign of corepressor specificity of the Escherichia coli purine repressor by substitution of residue 190.
Biochemistry, 37, 1998
4OVW
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BU of 4ovw by Molmil
ENDOGLUCANASE I COMPLEXED WITH EPOXYBUTYL CELLOBIOSE
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(beta-D-glucopyranosyloxy)-2,2-dihydroxybutyl propanoate, ENDOGLUCANASE I
Authors:Davies, G.J, Schulein, M.
Deposit date:1997-10-06
Release date:1998-04-08
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of the endoglucanase I from Fusarium oxysporum: native, cellobiose, and 3,4-epoxybutyl beta-D-cellobioside-inhibited forms, at 2.3 A resolution.
Biochemistry, 36, 1997
3GXQ
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BU of 3gxq by Molmil
Structure of ArtA and DNA complex
Descriptor: DNA (5'-D(*AP*CP*AP*TP*GP*AP*CP*AP*TP*G)-3'), DNA (5'-D(*AP*CP*AP*TP*GP*TP*CP*AP*TP*GP*T)-3'), Putative regulator of transfer genes ArtA
Authors:Ni, L, Firth, N, Schumacher, M.A.
Deposit date:2009-04-02
Release date:2009-10-13
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:The Staphylococcus aureus pSK41 plasmid-encoded ArtA protein is a master regulator of plasmid transmission genes and contains a RHH motif used in alternate DNA-binding modes.
Nucleic Acids Res., 37, 2009
1OJJ
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BU of 1ojj by Molmil
Anatomy of glycosynthesis: Structure and kinetics of the Humicola insolens Cel7BE197A and E197S glycosynthase mutants
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ENDOGLUCANASE I, beta-D-galactopyranose-(1-4)-alpha-D-glucopyranose, ...
Authors:Ducros, V.M.-A, Tarling, C.A, Zechel, D.L, Brzozowski, A.M, Frandsen, T.P, Von Ossowski, I, Schulein, M, Withers, S.G, Davies, G.J.
Deposit date:2003-07-10
Release date:2004-01-07
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Anatomy of Glycosynthesis: Structure and Kinetics of the Humicola Insolens Cel7B E197A and E197S Glycosynthase Mutants
Chem.Biol., 10, 2003
3NXC
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BU of 3nxc by Molmil
Molecular mechanism by which the Escherichia coli nucleoid occlusion factor, SlmA, keeps cytokinesis in check
Descriptor: HTH-type protein slmA
Authors:Tonthat, N.K, Schumacher, M.A.
Deposit date:2010-07-13
Release date:2011-02-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Molecular mechanism by which the nucleoid occlusion factor, SlmA, keeps cytokinesis in check.
Embo J., 30, 2011
2VE4
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BU of 2ve4 by Molmil
Substrate free cyanobacterial CYP120A1
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, PUTATIVE CYTOCHROME P450 120
Authors:Kuhnel, K, Ke, N, Sligar, S.G, Schuler, M.A, Schlichting, I.
Deposit date:2007-10-16
Release date:2008-04-29
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structures of Substrate-Free and Retinoic Acid-Bound Cyanobacterial Cytochrome P450 Cyp120A1.
Biochemistry, 47, 2008
2MF0
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BU of 2mf0 by Molmil
Structural basis of the non-coding RNA RsmZ acting as protein sponge: Conformer L of RsmZ(1-72)/RsmE(dimer) 1to3 complex
Descriptor: Carbon storage regulator homolog, RNA_(72-MER)
Authors:Duss, O, Michel, E, Yulikov, M, Schubert, M, Jeschke, G, Allain, F.H.-T.
Deposit date:2013-10-02
Release date:2014-05-21
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural basis of the non-coding RNA RsmZ acting as a protein sponge.
Nature, 509, 2014
2MF1
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BU of 2mf1 by Molmil
Structural basis of the non-coding RNA RsmZ acting as protein sponge: Conformer R of RsmZ(1-72)/RsmE(dimer) 1to3 complex
Descriptor: Carbon storage regulator homolog, RNA_(72-MER)
Authors:Duss, O, Michel, E, Yulikov, M, Schubert, M, Jeschke, G, Allain, F.H.-T.
Deposit date:2013-10-02
Release date:2014-05-21
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural basis of the non-coding RNA RsmZ acting as a protein sponge.
Nature, 509, 2014
3M8E
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BU of 3m8e by Molmil
Protein structure of Type III plasmid segregation TubR
Descriptor: Putative DNA-binding protein
Authors:Ni, L, Schumacher, M.A.
Deposit date:2010-03-17
Release date:2010-07-07
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:From the Cover: Plasmid protein TubR uses a distinct mode of HTH-DNA binding and recruits the prokaryotic tubulin homolog TubZ to effect DNA partition.
Proc.Natl.Acad.Sci.USA, 107, 2010
3HTA
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BU of 3hta by Molmil
Crystal structure of multidrug binding protein EbrR complexed with imidazole
Descriptor: EbrA repressor, IMIDAZOLE
Authors:Dong, J, Ni, L, Schumacher, M, Brennan, R.
Deposit date:2009-06-11
Release date:2010-07-14
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural plasticity is key to multiple ligand binding by the multidrug binding regulator EbrR
To be Published
3HTI
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BU of 3hti by Molmil
Crystal structure of multidrug binding protein EbrR complexed with malachite green
Descriptor: EbrA repressor, MALACHITE GREEN
Authors:Dong, J, Ni, L, Schumacher, M, Brennan, R.
Deposit date:2009-06-11
Release date:2010-07-14
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural plasticity is key to multiple ligand binding by the multidrug binding regulator EbrR
To be Published
4CE5
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BU of 4ce5 by Molmil
First crystal structure of an (R)-selective omega-transaminase from Aspergillus terreus
Descriptor: AT-OMEGATA, CALCIUM ION, CHLORIDE ION, ...
Authors:Lyskowski, A, Gruber, C, Steinkellner, G, Schurmann, M, Schwab, H, Gruber, K, Steiner, K.
Deposit date:2013-11-08
Release date:2014-02-12
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Crystal Structure of an (R)-Selective Omega-Transaminase from Aspergillus Terreus
Plos One, 9, 2014
2ENG
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BU of 2eng by Molmil
ENDOGLUCANASE V
Descriptor: ENDOGLUCANASE V
Authors:Davies, G.J, Schulein, M.
Deposit date:1995-06-29
Release date:1996-12-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structures of oligosaccharide-bound forms of the endoglucanase V from Humicola insolens at 1.9 A resolution.
Biochemistry, 34, 1995
6HLL
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BU of 6hll by Molmil
Crystal structure of the Neurokinin 1 receptor in complex with the small molecule antagonist CP-99,994
Descriptor: (2~{S},3~{S})-~{N}-[(2-methoxyphenyl)methyl]-2-phenyl-piperidin-3-amine, Substance-P receptor,GlgA glycogen synthase,Substance-P receptor
Authors:Schoppe, J, Ehrenmann, J, Klenk, C, Rucktooa, P, Schutz, M, Dore, A.S, Pluckthun, A.
Deposit date:2018-09-11
Release date:2019-01-16
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.27 Å)
Cite:Crystal structures of the human neurokinin 1 receptor in complex with clinically used antagonists.
Nat Commun, 10, 2019
1BDI
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BU of 1bdi by Molmil
PURINE REPRESSOR MUTANT-HYPOXANTHINE-PALINDROMIC OPERATOR COMPLEX
Descriptor: DNA (5'-D(*TP*AP*CP*GP*CP*AP*AP*AP*CP*GP*TP*TP*TP*GP*CP*GP*T )-3'), HYPOXANTHINE, PROTEIN (PURINE REPRESSOR)
Authors:Glasfeld, A, Schumacher, M.A, Choi, K.Y, Zalkin, H, Brennan, R.G.
Deposit date:1996-07-25
Release date:1997-04-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3 Å)
Cite:A Positively Charged Residue Bound in the Minor Groove Does not Alter the Bending of a DNA Duplex
J.Am.Chem.Soc., 118, 1996
1PRV
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BU of 1prv by Molmil
PURINE REPRESSOR DNA-BINDING DOMAIN DNA BINDING
Descriptor: PURINE REPRESSOR
Authors:Nagadoi, A, Morikawa, S, Nakamura, H, Enari, M, Kobayashi, K, Yamamoto, H, Sampei, G, Mizobuchi, K, Schumacher, M.A, Brennan, R.G, Nishimura, Y.
Deposit date:1995-05-08
Release date:1996-03-08
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural comparison of the free and DNA-bound forms of the purine repressor DNA-binding domain.
Structure, 3, 1995
1PRU
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BU of 1pru by Molmil
PURINE REPRESSOR DNA-BINDING DOMAIN DNA BINDING
Descriptor: PURINE REPRESSOR
Authors:Nagadoi, A, Morikawa, S, Nakamura, H, Enari, M, Kobayashi, K, Yamamoto, H, Sampei, G, Mizobuchi, K, Schumacher, M.A, Brennan, R.G, Nishimura, Y.
Deposit date:1995-05-08
Release date:1996-03-08
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural comparison of the free and DNA-bound forms of the purine repressor DNA-binding domain.
Structure, 3, 1995
2BVW
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BU of 2bvw by Molmil
CELLOBIOHYDROLASE II (CEL6A) FROM HUMICOLA INSOLENS IN COMPLEX WITH GLUCOSE AND CELLOTETRAOSE
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CELLOBIOHYDROLASE II, GLYCEROL, ...
Authors:Varrot, A, Davies, G.J, Schulein, M.
Deposit date:1999-02-18
Release date:2000-02-25
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural changes of the active site tunnel of Humicola insolens cellobiohydrolase, Cel6A, upon oligosaccharide binding.
Biochemistry, 38, 1999
1OVW
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BU of 1ovw by Molmil
ENDOGLUCANASE I COMPLEXED WITH NON-HYDROLYSABLE SUBSTRATE ANALOGUE
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-thio-beta-D-glucopyranose-(1-4)-4-thio-beta-D-glucopyranose-(1-4)-1,4-dithio-beta-D-glucopyranose, ENDOGLUCANASE I
Authors:Sulzenbacher, G, Davies, G.J, Schulein, M.
Deposit date:1996-10-17
Release date:1997-10-29
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of the Fusarium oxysporum endoglucanase I with a nonhydrolyzable substrate analogue: substrate distortion gives rise to the preferred axial orientation for the leaving group.
Biochemistry, 35, 1996
3OVW
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BU of 3ovw by Molmil
ENDOGLUCANASE I NATIVE STRUCTURE
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ENDOGLUCANASE I
Authors:Davies, G.J, Schulein, M.
Deposit date:1997-10-06
Release date:1998-04-08
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of the endoglucanase I from Fusarium oxysporum: native, cellobiose, and 3,4-epoxybutyl beta-D-cellobioside-inhibited forms, at 2.3 A resolution.
Biochemistry, 36, 1997
3M89
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BU of 3m89 by Molmil
Structure of TubZ-GTP-g-S
Descriptor: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, FtsZ/tubulin-related protein
Authors:Ni, L, Xu, W, Schumacher, M.A.
Deposit date:2010-03-17
Release date:2010-07-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:From the Cover: Plasmid protein TubR uses a distinct mode of HTH-DNA binding and recruits the prokaryotic tubulin homolog TubZ to effect DNA partition.
Proc.Natl.Acad.Sci.USA, 107, 2010
2PUG
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BU of 2pug by Molmil
CRYSTAL STRUCTURE OF THE LACI FAMILY MEMBER, PURR, BOUND TO DNA: MINOR GROOVE BINDING BY ALPHA HELICES
Descriptor: DNA (5'-D(*TP*AP*CP*GP*CP*AP*AP*AP*CP*GP*TP*TP*TP*GP*CP*GP*T )-3'), HYPOXANTHINE, PROTEIN (PURINE REPRESSOR)
Authors:Lu, F, Schumacher, M.A, Arvidson, D.N, Haldimann, A, Wanner, B.L, Zalkin, H, Brennan, R.G.
Deposit date:1997-10-04
Release date:1998-05-06
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure-based redesign of corepressor specificity of the Escherichia coli purine repressor by substitution of residue 190.
Biochemistry, 37, 1998
2PUF
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BU of 2puf by Molmil
CRYSTAL STRUCTURE OF THE LACI FAMILY MEMBER, PURR, BOUND TO DNA: MINOR GROOVE BINDING BY ALPHA HELICES
Descriptor: DNA (5'-D(*TP*AP*CP*GP*CP*AP*AP*AP*CP*GP*TP*TP*TP*GP*CP*GP*T )-3'), GUANINE, PROTEIN (PURINE REPRESSOR)
Authors:Lu, F, Schumacher, M.A, Arvidson, D.N, Haldimann, A, Wanner, B.L, Zalkin, H, Brennan, R.G.
Deposit date:1997-10-04
Release date:1998-05-06
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure-based redesign of corepressor specificity of the Escherichia coli purine repressor by substitution of residue 190.
Biochemistry, 37, 1998
1BDH
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BU of 1bdh by Molmil
PURINE REPRESSOR MUTANT-HYPOXANTHINE-PALINDROMIC OPERATOR COMPLEX
Descriptor: DNA (5'-D(*TP*AP*CP*GP*CP*AP*AP*AP*CP*GP*TP*TP*TP*GP*CP*GP*T )-3'), HYPOXANTHINE, PROTEIN (PURINE REPRESSOR)
Authors:Glasfeld, A, Schumacher, M.A, Choi, K.Y, Zalkin, H, Brennan, R.G.
Deposit date:1996-07-25
Release date:1997-04-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:A Positively Charged Residue Bound in the Minor Groove Does not Alter the Bending of a DNA Duplex
J.Am.Chem.Soc., 118, 1996
1QH6
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BU of 1qh6 by Molmil
CATALYSIS AND SPECIFICITY IN ENZYMATIC GLYCOSIDE HYDROLASES: A 2,5B CONFORMATION FOR THE GLYCOSYL-ENZYME INTERMIDIATE REVEALED BY THE STRUCTURE OF THE BACILLUS AGARADHAERENS FAMILY 11 XYLANASE
Descriptor: XYLANASE, beta-D-xylopyranose-(1-4)-2-deoxy-2-fluoro-alpha-D-xylopyranose
Authors:Sabini, E, Sulzenbacher, G, Dauter, M, Dauter, Z, Jorgensen, P.L, Schulein, M, Dupont, C, Davies, G.J, Wilson, K.S.
Deposit date:1999-05-11
Release date:2000-05-17
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Catalysis and specificity in enzymatic glycoside hydrolysis: a 2,5B conformation for the glycosyl-enzyme intermediate revealed by the structure of the Bacillus agaradhaerens family 11 xylanase.
Chem.Biol., 6, 1999

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