Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 2547 件

3K5I
DownloadVisualize
BU of 3k5i by Molmil
Crystal structure of N5-carboxyaminoimidazole synthase from aspergillus clavatus in complex with ADP and 5-aminoimadazole ribonucleotide
分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, 5-AMINOIMIDAZOLE RIBONUCLEOTIDE, ADENOSINE-5'-DIPHOSPHATE, ...
著者Thoden, J.B, Holden, H.M, Paritala, H, Firestine, S.M.
登録日2009-10-07
公開日2009-10-20
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural and functional studies of Aspergillus clavatus N(5)-carboxyaminoimidazole ribonucleotide synthetase
Biochemistry, 49, 2010
5HF2
DownloadVisualize
BU of 5hf2 by Molmil
Staphylococcus aureus Dihydrofolate Reductase complexed with cyclized alpha-NADPH anomer and 3'-(3-(2,4-diamino-6-ethylpyrimidin-5-yl)prop-2-yn-1-yl)-5'-methoxy-[1,1'-biphenyl]-4-carboxylic acid (UCP1175)
分子名称: 4-[3-[3-[2,4-bis(azanyl)-6-ethyl-pyrimidin-5-yl]prop-2-ynyl]-5-methoxy-phenyl]benzoic acid, Dihydrofolate reductase, GLYCEROL, ...
著者Reeve, S.M, Anderson, A.C.
登録日2016-01-06
公開日2017-01-18
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Staphylococcus aureus Dihydrofolate Reductase complexed with cyclized alpha-NADPH anomer and 3'-(3-(2,4-diamino-6-ethylpyrimidin-5-yl)prop-2-yn-1-yl)-5'-methoxy-[1,1'-biphenyl]-4-carboxylic acid (UCP1175)
To Be Published
5JCE
DownloadVisualize
BU of 5jce by Molmil
Crystal structure of OsCEBiP complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chitin elicitor-binding protein
著者Chai, J.J, Liu, S.M, Wang, J.Z.
登録日2016-04-15
公開日2016-06-08
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Molecular Mechanism for Fungal Cell Wall Recognition by Rice Chitin Receptor OsCEBiP
Structure, 24, 2016
4PHY
DownloadVisualize
BU of 4phy by Molmil
Functional conservation despite structural divergence in ligand-responsive RNA switches
分子名称: ACETATE ION, MAGNESIUM ION, RNA (26-MER), ...
著者Boerneke, M.A, Dibrov, S.M, Hermann, T.H.
登録日2014-05-07
公開日2015-02-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Functional conservation despite structural divergence in ligand-responsive RNA switches.
Proc.Natl.Acad.Sci.USA, 111, 2014
5JG0
DownloadVisualize
BU of 5jg0 by Molmil
Staphylococcus aureus Dihydrofolate Reductase complexed with beta-NADPH and UCP1191
分子名称: 4-{6-[(2S)-4-(2,4-diamino-6-ethylpyrimidin-5-yl)but-3-yn-2-yl]-2H-1,3-benzodioxol-4-yl}benzoic acid, Dihydrofolate reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Anderson, A.C, Reeve, S.M.
登録日2016-04-19
公開日2017-04-19
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.879 Å)
主引用文献MRSA Isolates from United States Hospitals Carry dfrG and dfrK Resistance Genes and Succumb to Propargyl-Linked Antifolates.
Cell Chem Biol, 23, 2016
5JH2
DownloadVisualize
BU of 5jh2 by Molmil
Crystal structure of the holo form of AKR4C7 from maize
分子名称: 1,2-ETHANEDIOL, ADENOSINE-2'-5'-DIPHOSPHATE, Aldose reductase, ...
著者Giuseppe, P.O, Santos, M.L, Sousa, S.M, Koch, K.E, Yunes, J.A, Aparicio, R, Murakami, M.T.
登録日2016-04-20
公開日2016-11-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献A comparative structural analysis reveals distinctive features of co-factor binding and substrate specificity in plant aldo-keto reductases.
Biochem.Biophys.Res.Commun., 474, 2016
8TVU
DownloadVisualize
BU of 8tvu by Molmil
In situ cryo-EM structure of bacteriophage P22 portal protein: head-to-tail protein complex at 3.0A resolution
分子名称: Peptidoglycan hydrolase gp4, Portal protein
著者Iglesias, S.M, Cingolani, G, Feng-Hou, C.
登録日2023-08-18
公開日2023-11-29
最終更新日2023-12-06
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Molecular Architecture of Salmonella Typhimurium Virus P22 Genome Ejection Machinery.
J.Mol.Biol., 435, 2023
3KAE
DownloadVisualize
BU of 3kae by Molmil
Cdc27 N-terminus
分子名称: CHLORIDE ION, GLYCEROL, Possible protein of nuclear scaffold, ...
著者Barford, D, Zhang, Z, Roe, S.M.
登録日2009-10-19
公開日2010-03-23
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.298 Å)
主引用文献Molecular structure of the N-terminal domain of the APC/C subunit Cdc27 reveals a homo-dimeric tetratricopeptide repeat architecture
J.Mol.Biol., 397, 2010
5HCE
DownloadVisualize
BU of 5hce by Molmil
Ternary complex of human Complement C5 with Ornithodoros moubata OmCI and Rhipicephalus appendiculatus RaCI1
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CYSTEINE, Complement C5, ...
著者Jore, M.M, Johnson, S, Lea, S.M.
登録日2016-01-04
公開日2016-03-30
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.12 Å)
主引用文献Structural basis for therapeutic inhibition of complement C5.
Nat.Struct.Mol.Biol., 23, 2016
5JCD
DownloadVisualize
BU of 5jcd by Molmil
Crystal structure of OsCEBiP
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Chitin elicitor-binding protein
著者Chai, J.J, Liu, S.M, Wang, J.Z.
登録日2016-04-15
公開日2017-02-22
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Molecular Mechanism for Fungal Cell Wall Recognition by Rice Chitin Receptor OsCEBiP
Structure, 24, 2016
2AU7
DownloadVisualize
BU of 2au7 by Molmil
The R43Q active site variant of E.coli inorganic pyrophosphatase
分子名称: CHLORIDE ION, Inorganic pyrophosphatase, MANGANESE (II) ION, ...
著者Samygina, V.R, Avaeva, S.M, Bartunik, H.D.
登録日2005-08-27
公開日2006-08-29
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献Reversible inhibition of Escherichia coli inorganic pyrophosphatase by fluoride: trapped catalytic intermediates in cryo-crystallographic studies
J.Mol.Biol., 366, 2007
2AUU
DownloadVisualize
BU of 2auu by Molmil
Inorganic pyrophosphatase complexed with magnesium pyrophosphate and fluoride
分子名称: CHLORIDE ION, FLUORIDE ION, MAGNESIUM ION, ...
著者Samygina, V.R, Popov, A.N, Avaeva, S.M, Bartunik, H.D.
登録日2005-08-29
公開日2006-08-29
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.22 Å)
主引用文献Reversible inhibition of Escherichia coli inorganic pyrophosphatase by fluoride: trapped catalytic intermediates in cryo-crystallographic studies
J.Mol.Biol., 366, 2007
5JH1
DownloadVisualize
BU of 5jh1 by Molmil
Crystal structure of the apo form of AKR4C7 from maize
分子名称: Aldose reductase, AKR4C7
著者Giuseppe, P.O, Santos, M.L, Sousa, S.M, Koch, K.E, Yunes, J.A, Aparicio, R, Murakami, M.T.
登録日2016-04-20
公開日2016-11-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献A comparative structural analysis reveals distinctive features of co-factor binding and substrate specificity in plant aldo-keto reductases.
Biochem.Biophys.Res.Commun., 474, 2016
4O43
DownloadVisualize
BU of 4o43 by Molmil
DNA Double-Strand Break Repair Pathway Choice Is Directed by Distinct MRE11 Nuclease Activities
分子名称: (5~{E})-3-[(2~{R})-butan-2-yl]-5-[(4-hydroxyphenyl)methylidene]-2-sulfanylidene-1,3-thiazolidin-4-one, Exonuclease, putative, ...
著者Shibata, A, Moiani, D, Arvai, A.S, Perry, J, Harding, S.M, Genois, M, Maity, R, Rossum-Fikkert, S, Kertokalio, A, Romoli, F, Ismail, A, Ismalaj, E, Petricci, E, Neale, M.J, Bristow, R.G, Masson, J, Wyman, C, Jeggo, P.A, Tainer, J.A.
登録日2013-12-18
公開日2014-01-08
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献DNA Double-Strand Break Repair Pathway Choice Is Directed by Distinct MRE11 Nuclease Activities.
Mol.Cell, 53, 2014
4O5G
DownloadVisualize
BU of 4o5g by Molmil
DNA Double-Strand Break Repair Pathway Choice Is Directed by Distinct MRE11 Nuclease Activities
分子名称: (5~{E})-5-[(4-aminophenyl)methylidene]-2-azanylidene-1,3-thiazolidin-4-one, Exonuclease, putative, ...
著者Shibata, A, Moiani, D, Arvai, A.S, Perry, J, Harding, S.M, Genois, M, Maity, R, Rossum-Fikkert, S, Kertokalio, A, Romoli, F, Ismail, A, Ismalaj, E, Petricci, E, Neale, M.J, Bristow, R.G, Masson, J, Wyman, C, Jeggo, P.A, Tainer, J.A.
登録日2013-12-19
公開日2014-01-08
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.301 Å)
主引用文献DNA Double-Strand Break Repair Pathway Choice Is Directed by Distinct MRE11 Nuclease Activities.
Mol.Cell, 53, 2014
2F54
DownloadVisualize
BU of 2f54 by Molmil
Directed evolution of human T cell receptor CDR2 residues by phage display dramatically enhances affinity for cognate peptide-MHC without increasing apparent cross-reactivity
分子名称: Beta-2-microglobulin, Cancer/testis antigen 1B, HLA class I histocompatibility antigen, ...
著者Rizkallah, P.J, Jakobsen, B.K, Dunn, S.M, Sami, M.
登録日2005-11-25
公開日2006-04-25
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Directed evolution of human T cell receptor CDR2 residues by phage display dramatically enhances affinity for cognate peptide-MHC without increasing apparent cross-reactivity.
Protein Sci., 15, 2006
2FAF
DownloadVisualize
BU of 2faf by Molmil
The structure of chicken mitochondrial PEPCK.
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, MANGANESE (II) ION, PENTAETHYLENE GLYCOL, ...
著者Holyoak, T, Sullivan, S.M, Nowak, T.
登録日2005-12-07
公開日2006-06-27
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural Insights into the Mechanism of PEPCK Catalysis
Biochemistry, 45, 2006
3K2Y
DownloadVisualize
BU of 3k2y by Molmil
Crystal structure of protein lp_0118 from Lactobacillus plantarum,northeast structural genomics consortium target LpR91B
分子名称: uncharacterized protein lp_0118
著者Seetharaman, J, Lew, S, Vorobiev, S.M, Wang, D, Janjua, H, Cunningham, K, Owens, L, Xiao, R, Liu, J, Baran, M.C, Acton, T.B, Rost, B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
登録日2009-09-30
公開日2009-11-17
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of protein lp_0118 from Lactobacillus plantarum,northeast structural genomics consortium target LpR91B
To be Published
4GWA
DownloadVisualize
BU of 4gwa by Molmil
Crystal Structure of a GH7 Family Cellobiohydrolase from Limnoria quadripunctata
分子名称: GH7 family protein, MAGNESIUM ION
著者McGeehan, J.E, Martin, R.N.A, Streeter, S.D, Cragg, S.M, Guille, M.J, Schnorr, K.M, Kern, M, Bruce, N.C, McQueen-Mason, S.J.
登録日2012-09-01
公開日2013-06-12
最終更新日2019-12-25
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural characterization of a unique marine animal family 7 cellobiohydrolase suggests a mechanism of cellulase salt tolerance
Proc.Natl.Acad.Sci.USA, 110, 2013
2FM2
DownloadVisualize
BU of 2fm2 by Molmil
HCV NS3-4A protease domain complexed with a ketoamide inhibitor, SCH446211
分子名称: BETA-MERCAPTOETHANOL, NS3 protease/helicase, NS4a protein, ...
著者Yi, M, Tong, X, Skelton, A, Chase, R, Chen, T, Prongay, A, Bogen, S.L, Saksena, A.K, Njoroge, F.G, Veselenak, R.L, Pyles, R.B, Bourne, N, Malcolm, B.A, Lemon, S.M.
登録日2006-01-06
公開日2006-02-07
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Mutations conferring resistance to SCH6, a novel hepatitis C virus NS3/4A protease inhibitor. Reduced RNA replication fitness and partial rescue by second-site mutations
J.Biol.Chem., 281, 2006
8U1O
DownloadVisualize
BU of 8u1o by Molmil
In situ cryo-EM structure of bacteriophage P22 tailspike protein complex at 3.4A resolution
分子名称: Tail spike protein
著者Iglesias, S.M, Feng-Hou, C, Cingolani, G.
登録日2023-09-01
公開日2023-11-29
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Molecular Architecture of Salmonella Typhimurium Virus P22 Genome Ejection Machinery.
J.Mol.Biol., 435, 2023
2FAH
DownloadVisualize
BU of 2fah by Molmil
The structure of mitochondrial PEPCK, Complex with Mn and GDP
分子名称: GUANOSINE-5'-DIPHOSPHATE, MALONIC ACID, MANGANESE (II) ION, ...
著者Holyoak, T, Sullivan, S.M, Nowak, T.
登録日2005-12-07
公開日2006-06-27
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Structural Insights into the Mechanism of PEPCK Catalysis
Biochemistry, 45, 2006
8TUC
DownloadVisualize
BU of 8tuc by Molmil
Unphosphorylated CaMKK2 in complex with CC-8977
分子名称: (4M)-2-cyclopentyl-4-(7-ethoxyquinazolin-4-yl)benzoic acid, 1,2-ETHANEDIOL, Calcium/calmodulin-dependent protein kinase kinase 2, ...
著者Bernard, S.M, Shanmugasundaram, V, D'Agostino, L.
登録日2023-08-16
公開日2023-12-13
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Identification of Small Molecule Inhibitors and Ligand Directed Degraders of Calcium/Calmodulin Dependent Protein Kinase Kinase 1 and 2 (CaMKK1/2).
J.Med.Chem., 66, 2023
2F20
DownloadVisualize
BU of 2f20 by Molmil
X-ray Crystal Structure of Protein BT_1218 from Bacteroides thetaiotaomicron. Northeast Structural Genomics Consortium Target BtR8.
分子名称: conserved hypothetical protein, with conserved domain
著者Vorobiev, S.M, Abashidze, M, Seetharaman, J, Forouhar, F, Xiao, R, Ma, L.-C, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
登録日2005-11-15
公開日2005-11-22
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of the Q8A8E9_BACTIN hypothetical protein from Bacteroides thetaiotaomicron.
To be Published
3HO2
DownloadVisualize
BU of 3ho2 by Molmil
Structure of E.coli FabF(C163A) in complex with Platencin
分子名称: 2,4-dihydroxy-3-({3-[(2S,4aS,8S,8aR)-8-methyl-3-methylidene-7-oxo-1,3,4,7,8,8a-hexahydro-2H-2,4a-ethanonaphthalen-8-yl]propanoyl}amino)benzoic acid, 3-oxoacyl-[acyl-carrier-protein] synthase 2
著者Soisson, S.M, Parthasarathy, G.
登録日2009-06-01
公開日2010-02-09
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Isolation, enzyme-bound structure and antibacterial activity of platencin A1 from Streptomyces platensis.
Bioorg.Med.Chem.Lett., 19, 2009

222926

件を2024-07-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon