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PDB: 2547 results

8CTF
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The N-terminal domain of PA endonuclease from the influenza H1N1 viral polymerase in complex with 3-hydroxy-4-oxo-1,4-dihydropyridine-2-carboxylic acid
Descriptor: 3-hydroxy-4-oxo-1,4-dihydropyridine-2-carboxylic acid, ACETATE ION, MANGANESE (II) ION, ...
Authors:Kohlbrand, A.J, Stokes, R.W, Karges, J, Seo, H, Sankaran, B, Cohen, S.M.
Deposit date:2022-05-14
Release date:2022-12-21
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Carboxylic Acid Isostere Derivatives of Hydroxypyridinones as Core Scaffolds for Influenza Endonuclease Inhibitors.
Acs Med.Chem.Lett., 14, 2023
8DJV
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The N-terminal domain of PA endonuclease from the influenza H1N1 viral polymerase in complex with 6-Bromo-3-hydroxy-N-methoxy-4-oxo-1,4-dihydropyridine-2-carboxamide
Descriptor: 6-bromo-3-hydroxy-N-methoxy-4-oxo-1,4-dihydropyridine-2-carboxamide, MANGANESE (II) ION, Polymerase acidic protein
Authors:Kohlbrand, A.J, Stokes, R.W, Karges, J, Seo, H, Sankaran, B, Cohen, S.M.
Deposit date:2022-07-01
Release date:2022-12-21
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Carboxylic Acid Isostere Derivatives of Hydroxypyridinones as Core Scaffolds for Influenza Endonuclease Inhibitors.
Acs Med.Chem.Lett., 14, 2023
2QTI
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BU of 2qti by Molmil
Crystal structure of the UPF0352 protein SO_2176 from Shewanella oneidensis. NESG target SoR77.
Descriptor: UPF0352 protein SO_2176
Authors:Vorobiev, S.M, Su, M, Seetharaman, J, Kuzin, A.P, Wang, D, Cunningham, K, Owens, L, Maglaqui, M, Fang, Y, Xiao, R, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2007-08-02
Release date:2007-08-21
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the UPF0352 protein SO_2176 from Shewanella oneidensis.
To be Published
2LEY
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BU of 2ley by Molmil
Solution structure of (R7G)-Crp4
Descriptor: Alpha-defensin 4
Authors:Rosengren, K, Andersson, H.S, Haugaard-Kedstrom, L.M, Bengtsson, E, Daly, N.L, Figueredo, S.M, Qu, X, Craik, D.J, Ouellette, A.J.
Deposit date:2011-06-26
Release date:2012-05-16
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:The alpha-defensin salt-bridge induces backbone stability to facilitate folding and confer proteolytic resistance.
Amino Acids, 43, 2012
2R29
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Neutralization of dengue virus by a serotype cross-reactive antibody elucidated by cryoelectron microscopy and x-ray crystallography
Descriptor: Envelope protein E, Heavy chain of Fab 1A1D-2, Light chain of Fab 1A1D-2
Authors:Lok, S.M, Kostyuchenko, V.K, Nybakken, G.E, Holdaway, H.A, Battisti, A.J, Sukupolvi-petty, S, Sedlak, D, Fremont, D.H, Chipman, P.R, Roehrig, J.T, Diamond, M.S, Kuhn, R.J, Rossmann, M.G.
Deposit date:2007-08-24
Release date:2007-12-25
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (3 Å)
Cite:Binding of a neutralizing antibody to dengue virus alters the arrangement of surface glycoproteins.
Nat.Struct.Mol.Biol., 15, 2008
6A4R
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BU of 6a4r by Molmil
Crystal structure of aspartate bound peptidase E from Salmonella enterica
Descriptor: ASPARTIC ACID, Peptidase E
Authors:Yadav, P, Chandravanshi, K, Goyal, V.D, Singh, R, Kumar, A, Gokhale, S.M, Makde, R.D.
Deposit date:2018-06-20
Release date:2018-10-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.828 Å)
Cite:Structure of Asp-bound peptidase E from Salmonella enterica: Active site at dimer interface illuminates Asp recognition.
FEBS Lett., 592, 2018
2LCZ
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NMR Structure of the Complete Internal Fusion Loop from Ebolavirus GP2 at pH 7.0
Descriptor: Virion spike glycoprotein
Authors:Gregory, S.M, Harada, E, Liang, B, Tamm, L.K.
Deposit date:2011-05-12
Release date:2011-06-22
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structure and function of the complete internal fusion loop from Ebolavirus glycoprotein 2.
Proc.Natl.Acad.Sci.USA, 108, 2011
2QAI
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BU of 2qai by Molmil
Crystal structure of the V-type ATP synthase subunit F from Pyrococcus furiosus. NESG target PfR7.
Descriptor: V-type ATP synthase subunit F
Authors:Vorobiev, S.M, Su, M, Seetharaman, J, Ma, L.-C, Shih, L, Fang, Y, Xiao, R, Acton, T.B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2007-06-15
Release date:2007-06-26
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of the V-type ATP synthase subunit F from Pyrococcus furiosus.
To be Published
1BNX
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BU of 1bnx by Molmil
STRUCTURAL STUDIES ON THE EFFECTS OF THE DELETION IN THE RED CELL ANION EXCHANGER (BAND3, AE1) ASSOCIATED WITH SOUTH EAST ASIAN OVALOCYTOSIS.
Descriptor: PROTEIN (BAND 3)
Authors:Chambers, E.J, Bloomberg, G.B, Ring, S.M, Tanner, M.J.A.
Deposit date:1998-07-30
Release date:1998-08-05
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Studies on the structure of a transmembrane region and a cytoplasmic loop of the human red cell anion exchanger (band 3, AE1).
Biochem.Soc.Trans., 26, 1998
2LF8
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BU of 2lf8 by Molmil
Intramolecular regulation of the ETS Domain within ETV6 sequence R335 to R458
Descriptor: Transcription factor ETV6
Authors:Coyne III, H, Green, S.M, Graves, B.J, Mcintosh, L.P.
Deposit date:2011-06-28
Release date:2012-05-23
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Autoinhibition of ETV6 (TEL) DNA Binding: Appended Helices Sterically Block the ETS Domain.
J.Mol.Biol., 421, 2012
2QK9
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BU of 2qk9 by Molmil
Human RNase H catalytic domain mutant D210N in complex with 18-mer RNA/DNA hybrid
Descriptor: 5'-D(*GP*GP*AP*AP*TP*CP*AP*GP*GP*TP*GP*TP*CP*GP*CP*AP*CP*T)-3', 5'-R(*AP*GP*UP*GP*CP*GP*AP*CP*AP*CP*CP*UP*GP*AP*UP*UP*CP*C)-3', CITRATE ANION, ...
Authors:Nowotny, M, Gaidamakov, S.A, Ghirlando, R, Cerritelli, S.M, Crouch, R.J, Yang, W.
Deposit date:2007-07-10
Release date:2007-11-13
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Structure of Human RNase H1 Complexed with an RNA/DNA Hybrid: Insight into HIV Reverse Transcription
Mol.Cell, 28, 2007
2LUV
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BU of 2luv by Molmil
Structure and Binding Interface of the Cytosolic Tails of aXb2 Integrin
Descriptor: Integrin alpha-X
Authors:Chua, G.L, Tang, X, Patra, T.A, Tan, S.M, Bhattacharjya, S.
Deposit date:2012-06-21
Release date:2012-07-04
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure and Binding Interface of the Cytosolic Tails of aXb2 Integrin
To be Published
2QF1
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Rat cytosolic PEPCK in complex with oxaloacetic acid.
Descriptor: MANGANESE (II) ION, OXALOACETATE ION, Phosphoenolpyruvate carboxykinase, ...
Authors:Sullivan, S.M, Holyoak, T.
Deposit date:2007-06-26
Release date:2007-08-21
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structures of rat cytosolic PEPCK: insight into the mechanism of phosphorylation and decarboxylation of oxaloacetic acid.
Biochemistry, 46, 2007
4AIP
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BU of 4aip by Molmil
The FrpB iron transporter from Neisseria meningitidis (F3-3 variant)
Descriptor: 3,6,9,12,15-PENTAOXATRICOSAN-1-OL, FE-REGULATED PROTEIN B, GLUTAMIC ACID
Authors:Saleem, M, Prince, S.M, Derrick, J.P.
Deposit date:2012-02-11
Release date:2013-01-23
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Use of a Molecular Decoy to Segregate Transport from Antigenicity in the Frpb Iron Transporter from Neisseria Meningitidis
Plos One, 8, 2013
1CZ1
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EXO-B-(1,3)-GLUCANASE FROM CANDIDA ALBICANS AT 1.85 A RESOLUTION
Descriptor: PROTEIN (EXO-B-(1,3)-GLUCANASE)
Authors:Cutfield, S.M, Davies, G.J, Murshudov, G, Anderson, B.F, Moody, P.C.E, Sullivan, P.A, Cutfield, J.F.
Deposit date:1999-09-01
Release date:2000-01-03
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The structure of the exo-beta-(1,3)-glucanase from Candida albicans in native and bound forms: relationship between a pocket and groove in family 5 glycosyl hydrolases.
J.Mol.Biol., 294, 1999
2QZY
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BU of 2qzy by Molmil
The structure of chicken mitochondrial PEPCK in complex with PEP
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, MANGANESE (II) ION, PHOSPHOENOLPYRUVATE, ...
Authors:Holyoak, T, Sullivan, S.M, Nowak, T.
Deposit date:2007-08-17
Release date:2007-09-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Insights into the Mechanism of PEPCK Catalysis
Biochemistry, 45, 2006
1CJB
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BU of 1cjb by Molmil
MALARIAL PURINE PHOSPHORIBOSYLTRANSFERASE
Descriptor: (1S)-1(9-DEAZAHYPOXANTHIN-9YL)1,4-DIDEOXY-1,4-IMINO-D-RIBITOL-5-PHOSPHATE, MAGNESIUM ION, PROTEIN (HYPOXANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE), ...
Authors:Shi, W, Li, C.M, Tyler, P.C, Furneaux, R.H, Cahill, S.M, Girvin, M.E, Grubmeyer, C, Schramm, V.L, Almo, S.C.
Deposit date:1999-04-08
Release date:1999-08-18
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:The 2.0 A structure of malarial purine phosphoribosyltransferase in complex with a transition-state analogue inhibitor.
Biochemistry, 38, 1999
8D94
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BU of 8d94 by Molmil
SAMHD1-DNA complex
Descriptor: CALCIUM ION, DNA (5'-D(P*TP*GP*T)-3'), Deoxynucleoside triphosphate triphosphohydrolase SAMHD1, ...
Authors:Hollis, T.J, Batalis, S.M.
Deposit date:2022-06-09
Release date:2023-07-05
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:SAMHD1-DNA complex
To Be Published
8BHZ
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BU of 8bhz by Molmil
The apo-crystal structure of a variant form of the 28-kDa Schistosoma haematobium glutathione transferase in orthorhombic form
Descriptor: Glutathione S-transferase class-mu 28 kDa isozyme
Authors:Pandian, R, Mfeka, S.M, Onisuru, O, Sayed, Y, Achilonu, I.A.
Deposit date:2022-11-01
Release date:2022-11-30
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Biophysical and biochemical characterization of 28-kDa glutathione transferase from Schistosoma haematobium
To Be Published
2JKL
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BU of 2jkl by Molmil
DraE Adhesin in complex with Bromamphenicol
Descriptor: 1,2-ETHANEDIOL, BROMAMPHENICOL, CHLORAMPHENICOL, ...
Authors:Pettigrew, D.M, Roversi, P, Davies, S.G, Russell, A.J, Lea, S.M.
Deposit date:2008-08-28
Release date:2008-12-16
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A Structural Study of the Interaction between the Dr Haemagglutinin Drae and Derivatives of Chloramphenicol
Acta Crystallogr.,Sect.D, 65, 2009
6AF4
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BU of 6af4 by Molmil
Toxin-Antitoxin module from Streptococcus pneumoniae
Descriptor: HigA antitoxin, HigB toxin
Authors:Kang, S.M, Kim, D.H, Jin, C.
Deposit date:2018-08-08
Release date:2019-08-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Toxin-Antitoxin module from Streptococcus pneumoniae
To Be Published
1A93
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BU of 1a93 by Molmil
NMR SOLUTION STRUCTURE OF THE C-MYC-MAX HETERODIMERIC LEUCINE ZIPPER, NMR, MINIMIZED AVERAGE STRUCTURE
Descriptor: MAX PROTEIN, MYC PROTO-ONCOGENE PROTEIN
Authors:Lavigne, P, Crump, M.P, Gagne, S.M, Hodges, R.S, Kay, C.M, Sykes, B.D.
Deposit date:1998-04-15
Release date:1998-10-21
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Insights into the mechanism of heterodimerization from the 1H-NMR solution structure of the c-Myc-Max heterodimeric leucine zipper.
J.Mol.Biol., 281, 1998
183D
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BU of 183d by Molmil
X-RAY STRUCTURE OF A DNA DECAMER CONTAINING 7, 8-DIHYDRO-8-OXOGUANINE
Descriptor: DNA (5'-D(*CP*CP*AP*(8OG)P*CP*GP*CP*TP*GP*G)-3')
Authors:Lipscomb, L.A, Peek, M.E, Morningstar, M.L, Verghis, S.M, Miller, E.M, Rich, A, Essigmann, J.M, Williams, L.D.
Deposit date:1994-08-01
Release date:1995-02-27
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:X-ray structure of a DNA decamer containing 7,8-dihydro-8-oxoguanine.
Proc.Natl.Acad.Sci.USA, 92, 1995
2QZU
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BU of 2qzu by Molmil
Crystal structure of the putative sulfatase yidJ from Bacteroides fragilis. Northeast Structural Genomics Consortium target BfR123
Descriptor: Putative sulfatase yidJ
Authors:Vorobiev, S.M, Abashidze, M, Seetharaman, J, Wang, D, Cunningham, K, Maglaqui, M, Owens, L, Xiao, R, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2007-08-17
Release date:2007-09-04
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:X-ray crystal structure of the putative sulfatase yidJ from Bacteroides fragilis.
To be Published
2R69
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BU of 2r69 by Molmil
Crystal structure of Fab 1A1D-2 complexed with E-DIII of Dengue virus at 3.8 angstrom resolution
Descriptor: Heavy chain of 1A1D-2, Light chain of 1A1D-2, Major envelope protein E
Authors:Lok, S.M, Kostyuchenko, V.K, Nybakken, G.E, Holdaway, H.A, Battisti, A.J, Sukupolvi-petty, S, Sedlak, D, Fremont, D.H, Chipman, P.R, Roehrig, J.T, Diamond, M.S, Kuhn, R.J, Rossmann, M.G.
Deposit date:2007-09-05
Release date:2007-12-25
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Binding of a neutralizing antibody to dengue virus alters the arrangement of surface glycoproteins.
Nat.Struct.Mol.Biol., 15, 2008

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