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PDB: 97 results

7SD4
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BU of 7sd4 by Molmil
SARS-CoV-2 Nucleocapsid N-terminal domain (N-NTD) protein
Descriptor: Nucleoprotein
Authors:Sarkar, S, Runge, B, Russell, R.W, Calero, D, Zeinalilathori, S, Quinn, C.M, Lu, M, Calero, G, Gronenborn, A.M, Polenova, T.
Deposit date:2021-09-29
Release date:2022-06-08
Last modified:2024-05-15
Method:SOLID-STATE NMR
Cite:Atomic-Resolution Structure of SARS-CoV-2 Nucleocapsid Protein N-Terminal Domain.
J.Am.Chem.Soc., 144, 2022
4QPF
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BU of 4qpf by Molmil
New lower bone affinity bisphosphonate drug design for effective use in diseases characterized by abnormal bone resorption
Descriptor: Farnesyl pyrophosphate synthase, MAGNESIUM ION, [1-fluoro-2-(imidazo[1,2-a]pyridin-3-yl)ethane-1,1-diyl]bis(phosphonic acid)
Authors:Ebetino, F.H, Lundy, M, Kwaasi, A.A, Dunford, J.E, Duan, Z, Triffitt, J, Mazur, A, Jeans, G, Barnett, B.L, Russell, R.G.G.
Deposit date:2014-06-23
Release date:2015-06-24
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:New lower bone affinity bisphosphonate drug design for effective use in diseases characterized by abnormal bone resorption
To be Published
4Q23
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The role of threonine 201 and tyrosine 204 in the human farnesyl pyrophosphate synthase catalytic mechanism and the mode of inhibition by the nitrogen-containing bisphosphonates
Descriptor: 1-HYDROXY-2-(3-PYRIDINYL)ETHYLIDENE BIS-PHOSPHONIC ACID, Farnesyl pyrophosphate synthase, MAGNESIUM ION, ...
Authors:Tsoumpra, M.K, Muniz, J.R.C, Barnett, B.L, Kwaasi, A.A, Pilka, E.S, Kavanagh, K.L, Evdokimov, A, Walter, R.L, Ebetino, F.H, von Delft, F, Oppermann, U, Russell, R.G.G, Dunford, J.E.
Deposit date:2014-04-05
Release date:2015-03-18
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:The role of threonine 201 and tyrosine 204 in the human farnesyl pyrophosphate synthase catalytic mechanism and the mode of inhibition by the nitrogen-containing bisphosphonates
To be Published
7R7P
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Immature HIV-1 CACTD-SP1 lattice with Bevirimat (BVM) and Inositol hexakisphosphate (IP6)
Descriptor: 3alpha-[(3-carboxy-3-methylbutanoyl)oxy]-8alpha,9beta,10alpha,13alpha,17alpha,19beta-lup-20(29)-en-28-oic acid, Gag polyprotein, INOSITOL HEXAKISPHOSPHATE
Authors:Sarkar, S, Zadrozny, K.K, Zadorozhnyi, R, Russell, R.W, Quinn, C.M, Kleinpeter, A, Ablan, S, Meshkin, H, Perilla, J.R, Ganser-Pornillos, B.K, Pornillos, O, Freed, E.O, Gronenborn, A.M, Polenova, T.
Deposit date:2021-06-25
Release date:2023-02-15
Last modified:2024-05-15
Method:SOLID-STATE NMR
Cite:Structural basis of HIV-1 maturation inhibitor binding and activity.
Nat Commun, 14, 2023
7R7Q
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Immature HIV-1 CACTD-SP1 lattice with Inositol hexakisphosphate (IP6)
Descriptor: Gag polyprotein, INOSITOL HEXAKISPHOSPHATE
Authors:Sarkar, S, Zadrozny, K.K, Zadorozhnyi, R, Russell, R.W, Quinn, C.M, Kleinpeter, A, Ablan, S, Meshkin, H, Perilla, J.R, Ganser-Pornillos, B.K, Pornillos, O, Freed, E.O, Gronenborn, A.M, Polenova, T.
Deposit date:2021-06-25
Release date:2023-02-15
Last modified:2024-05-15
Method:SOLID-STATE NMR
Cite:Structural basis of HIV-1 maturation inhibitor binding and activity.
Nat Commun, 14, 2023
7U8K
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BU of 7u8k by Molmil
Magic Angle Spinning NMR Structure of Human Cofilin-2 Assembled on Actin Filaments
Descriptor: Actin, alpha skeletal muscle, Cofilin-2
Authors:Kraus, J, Russell, R, Kudryashova, E, Xu, C, Katyal, N, Kudryashov, D, Perilla, J.R, Polenova, T.
Deposit date:2022-03-08
Release date:2023-08-16
Last modified:2024-02-28
Method:SOLID-STATE NMR
Cite:Magic angle spinning NMR structure of human cofilin-2 assembled on actin filaments reveals isoform-specific conformation and binding mode.
Nat Commun, 13, 2022
3L4Q
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BU of 3l4q by Molmil
Structural insights into phosphoinositide 3-kinase activation by the influenza A virus NS1 protein
Descriptor: GLYCEROL, Non-structural protein 1, Phosphatidylinositol 3-kinase regulatory subunit beta
Authors:Hale, B.G, Kerry, P.S, Jackson, D, Precious, B.L, Gray, A, Killip, M.J, Randall, R.E, Russell, R.J.
Deposit date:2009-12-21
Release date:2010-02-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural insights into phosphoinositide 3-kinase activation by the influenza A virus NS1 protein
Proc.Natl.Acad.Sci.USA, 107, 2010
8CX6
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TPX2 Minimal Active Domain on Microtubules
Descriptor: Targeting protein for Xklp2-A
Authors:Guo, C, Alfaro-Aco, R, Russell, R, Zhang, C, Petry, S, Polenova, T.
Deposit date:2022-05-19
Release date:2023-06-28
Last modified:2024-05-15
Method:SOLID-STATE NMR
Cite:Structural basis of protein condensation on microtubules underlying branching microtubule nucleation.
Nat Commun, 14, 2023
3B7L
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BU of 3b7l by Molmil
Human farnesyl diphosphate synthase complexed with MG and minodronate
Descriptor: (1-HYDROXY-2-IMIDAZO[1,2-A]PYRIDIN-3-YLETHANE-1,1-DIYL)BIS(PHOSPHONIC ACID), Farnesyl pyrophosphate synthetase, MAGNESIUM ION
Authors:Pilka, E.S, Dunford, J.E, Guo, K, Pike, A.C.W, Kavanagh, K.L, von Delft, F, Ebetino, F.H, Arrowsmith, C.H, Edwards, A.M, Russell, R.G.G, Oppermann, U, Structural Genomics Consortium (SGC)
Deposit date:2007-10-31
Release date:2007-11-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Human farnesyl diphosphate synthase complexed with MG and minodronate.
TO BE PUBLISHED
1HG3
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BU of 1hg3 by Molmil
Crystal structure of tetrameric TIM from Pyrococcus woesei.
Descriptor: 3-PHOSPHONOPROPANOIC ACID, TRIOSEPHOSPHATE ISOMERASE
Authors:Walden, H, Bell, G.S, Russell, R.J.M, Siebers, B, Hensel, R, Taylor, G.L.
Deposit date:2000-12-12
Release date:2001-03-07
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Tiny Tim: A Small, Tetrameric, Hyperthermostable Triosephosphate Isomerase
J.Mol.Biol., 306, 2001
3CKZ
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BU of 3ckz by Molmil
N1 Neuraminidase H274Y + Zanamivir
Descriptor: CALCIUM ION, Neuraminidase, ZANAMIVIR
Authors:Colllins, P, Haire, L.F, Lin, Y.P, Liu, J, Russell, R.J, Walker, P.A, Skehel, J.J, Martin, S.R, Hay, A.J, Gamblin, S.J.
Deposit date:2008-03-18
Release date:2008-05-20
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of oseltamivir-resistant influenza virus neuraminidase mutants.
Nature, 453, 2008
1H0Y
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Structure of Alba: an archaeal chromatin protein modulated by acetylation
Descriptor: DNA BINDING PROTEIN SSO10B, SULFATE ION
Authors:Wardleworth, B.N, Russell, R.J.M, Bell, S.D, Taylor, G.L, White, M.F.
Deposit date:2002-07-01
Release date:2002-09-05
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of Alba: An Archaeal Chromatin Protein Modulated by Acetylation
Embo J., 21, 2002
6WAP
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BU of 6wap by Molmil
Atomic-Resolution Structure of HIV-1 Capsid Tubes by Magic Angle Spinning NMR
Descriptor: HIV-1 capsid protein
Authors:Lu, M, Russell, R.W, Bryer, A, Quinn, C.M, Hou, G, Zhang, H, Schwieters, C.D, Perilla, J.R, Gronenborn, A.M, Polenova, T.
Deposit date:2020-03-25
Release date:2020-09-02
Last modified:2024-05-15
Method:SOLID-STATE NMR
Cite:Atomic-resolution structure of HIV-1 capsid tubes by magic-angle spinning NMR.
Nat.Struct.Mol.Biol., 27, 2020
1H0X
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BU of 1h0x by Molmil
Structure of Alba: an archaeal chromatin protein modulated by acetylation
Descriptor: DNA BINDING PROTEIN SSO10B
Authors:Wardleworth, B.N, Russell, R.J.M, Bell, S.D, Taylor, G.L, White, M.F.
Deposit date:2002-07-01
Release date:2002-09-05
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of Alba: An Archaeal Chromatin Protein Modulated by Acetylation
Embo J., 21, 2002
3O9S
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BU of 3o9s by Molmil
Effector domain of influenza A/PR/8/34 NS1
Descriptor: Nonstructural protein 1
Authors:Kerry, P.S, Lewis, A, Hale, B.G, Hass, C, Taylor, M.A, Randall, R.E, Russell, R.J.M.
Deposit date:2010-08-04
Release date:2011-05-11
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:A Transient Homotypic Interaction Model for the Influenza A Virus NS1 Protein Effector Domain.
Plos One, 6, 2011
7RIK
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BU of 7rik by Molmil
Magic-Angle-Spinning NMR Structure of Kinesin-1 Motor Domain Assembled with Microtubules
Descriptor: Kinesin-1 heavy chain
Authors:Zhang, C, Guo, C, Russell, R.W, Quinn, C.M, Li, M, Williams, J.C, Gronenborn, A.M, Polenova, T.
Deposit date:2021-07-20
Release date:2022-11-23
Last modified:2024-05-15
Method:SOLID-STATE NMR
Cite:Magic-angle-spinning NMR structure of the kinesin-1 motor domain assembled with microtubules reveals the elusive neck linker orientation
Nat Commun, 13, 2022
3O9T
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BU of 3o9t by Molmil
Effector domain from influenza A/PR/8/34 NS1
Descriptor: HEXAETHYLENE GLYCOL, Nonstructural protein 1
Authors:Kerry, P.S, Lewis, A, Hale, B.G, Hass, C, Taylor, M.A, Randall, R.E, Russell, R.J.M.
Deposit date:2010-08-04
Release date:2011-05-11
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A Transient Homotypic Interaction Model for the Influenza A Virus NS1 Protein Effector Domain.
Plos One, 6, 2011
2O7V
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Carboxylesterase AeCXE1 from Actinidia eriantha covalently inhibited by paraoxon
Descriptor: CXE carboxylesterase, DIETHYL PHOSPHONATE
Authors:Ileperuma, N.R, Marshall, S.D, Squire, C.J, Baker, H.M, Oakeshott, J.G, Russell, R.J, Plummer, K.M, Newcomb, R.D, Baker, E.N.
Deposit date:2006-12-11
Release date:2007-02-27
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:High-Resolution Crystal Structure of Plant Carboxylesterase AeCXE1, from Actinidia eriantha, and Its Complex with a High-Affinity Inhibitor Paraoxon.
Biochemistry, 46, 2007
2O7R
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Plant carboxylesterase AeCXE1 from Actinidia eriantha with acyl adduct
Descriptor: CXE carboxylesterase, PROPYL ACETATE
Authors:Ileperuma, N.R, Marshall, S.D, Squire, C.J, Baker, H.M, Oakeshott, J.G, Russell, R.J, Plummer, K.M, Newcomb, R.D, Baker, E.N.
Deposit date:2006-12-11
Release date:2007-02-27
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:High-Resolution Crystal Structure of Plant Carboxylesterase AeCXE1, from Actinidia eriantha, and Its Complex with a High-Affinity Inhibitor Paraoxon.
Biochemistry, 46, 2007
3CL2
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N1 Neuraminidase N294S + Oseltamivir
Descriptor: (3R,4R,5S)-4-(acetylamino)-5-amino-3-(pentan-3-yloxy)cyclohex-1-ene-1-carboxylic acid, Neuraminidase
Authors:Collins, P, Haire, L.F, Lin, Y.P, Liu, J, Russell, R.J, Walker, P.A, Skehel, J.J, Martin, S.R, Hay, A.J, Gamblin, S.J.
Deposit date:2008-03-18
Release date:2008-05-20
Last modified:2018-08-22
Method:X-RAY DIFFRACTION (2.538 Å)
Cite:Crystal structures of oseltamivir-resistant influenza virus neuraminidase mutants.
Nature, 453, 2008
2F4V
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30S ribosome + designer antibiotic
Descriptor: (2R)-4-AMINO-N-{(1R,2S,3R,4R,5S)-5-AMINO-2-{2-[(2-AMINOETHYL)AMINO]ETHOXY}-4-[(2,6-DIAMINO-2,6-DIDEOXY-ALPHA-D-GLUCOPYRANOSYL)OXY]-3-HYDROXYCYCLOHEXYL}-2-HYDROXYBUTANAMIDE, (2S,4S,4AR,5AS,6S,11R,11AS,12R,12AR)-7-CHLORO-4-(DIMETHYLAMINO)-6,10,11,12-TETRAHYDROXY-1,3-DIOXO-1,2,3,4,4A,5,5A,6,11,11A,12,12A-DODECAHYDROTETRACENE-2-CARBOXAMIDE, 16S ribosomal RNA, ...
Authors:Murray, J.B, Meroueh, S.O, Russell, R.J, Lentzen, G, Haddad, J, Mobashery, S.
Deposit date:2005-11-24
Release date:2006-07-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Interactions of designer antibiotics and the bacterial ribosome aminoacyl-tRNA site
Chem.Biol., 13, 2006
3OA9
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Effector domain of influenza A/Duck/Albany/76 NS1
Descriptor: Non-structural protein 1
Authors:Kerry, P.S, Lewis, A, Hale, B.G, Hass, C, Taylor, M.A, Randall, R.E, Russell, R.J.M.
Deposit date:2010-08-05
Release date:2011-05-11
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:A Transient Homotypic Interaction Model for the Influenza A Virus NS1 Protein Effector Domain.
Plos One, 6, 2011
3O9R
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Effector domain of NS1 from influenza A/PR/8/34 containing a W187A mutation
Descriptor: Nonstructural protein 1
Authors:Kerry, P.S, Lewis, A, Hale, B.G, Hass, C, Taylor, M.A, Randall, R.E, Russell, R.J.M.
Deposit date:2010-08-04
Release date:2011-05-11
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:A Transient Homotypic Interaction Model for the Influenza A Virus NS1 Protein Effector Domain.
Plos One, 6, 2011
3O9Q
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Effector domain of NS1 from A/PR/8/34 containing a W187A mutation
Descriptor: Nonstructural protein 1
Authors:Kerry, P.S, Lewis, A, Hale, B.G, Hass, C, Taylor, M.A, Randall, R.E, Russell, R.J.M.
Deposit date:2010-08-04
Release date:2011-05-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A Transient Homotypic Interaction Model for the Influenza A Virus NS1 Protein Effector Domain.
Plos One, 6, 2011
3O9U
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Effector domain of influenza A/PR/8/34 NS1
Descriptor: Nonstructural protein 1
Authors:Kerry, P.S, Lewis, A, Hale, B.G, Hass, C, Taylor, M.A, Randall, R.E, Russell, R.J.M.
Deposit date:2010-08-04
Release date:2011-05-11
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:A Transient Homotypic Interaction Model for the Influenza A Virus NS1 Protein Effector Domain.
Plos One, 6, 2011

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