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PDB: 59 件

1M5K
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Crystal structure of a hairpin ribozyme in the catalytically-active conformation
分子名称: CALCIUM ION, CHLORIDE ION, PROTEIN (U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A), ...
著者Rupert, P.B, Ferre-D'Amare, A.R.
登録日2002-07-09
公開日2002-08-02
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Transition state stabilization by a catalytic RNA
Science, 298, 2002
1M5V
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Transition State Stabilization by a Catalytic RNA
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, RNA HAIRPIN RIBOZYME, ...
著者Rupert, P.B, Massey, A.P, Sigurdsson, S.T, Ferre-D'Amare, A.R.
登録日2002-07-09
公開日2002-10-12
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Transition state stabilization by a catalytic RNA
Science, 298, 2002
1M5P
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Transition State Stabilization by a Catalytic RNA
分子名称: CALCIUM ION, RNA HAIRPIN RIBOZYME, RNA INHIBITOR SUBSTRATE, ...
著者Rupert, P.B, Massey, A, Sigurdsson, S.T, Ferre-D'Amare, A.R.
登録日2002-07-09
公開日2002-10-12
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Transition state stabilization by a catalytic RNA
Science, 298, 2002
1M5O
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Transition State Stabilization by a Catalytic RNA
分子名称: CALCIUM ION, RNA SUBSTRATE, RNA HAIRPIN RIBOZYME, ...
著者Rupert, P.B, Massey, A.P, Sigurdsson, S.T, Ferre-D'Amare, A.R.
登録日2002-07-09
公開日2002-10-12
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Transition state stabilization by a catalytic RNA
Science, 298, 2002
6OKE
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BU of 6oke by Molmil
Crystal structure of an apo Transferrin-Receptor-Binding cystine-dense peptide
分子名称: Transferrin-Receptor Binding Peptide
著者Rupert, P.B, Strong, R.K.
登録日2019-04-12
公開日2020-04-15
最終更新日2020-07-08
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献A TfR-Binding Cystine-Dense Peptide Promotes Blood-Brain Barrier Penetration of Bioactive Molecules.
J.Mol.Biol., 432, 2020
6O5D
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PYOCHELIN
分子名称: GLYCEROL, Neutrophil gelatinase-associated lipocalin, SULFATE ION
著者Rupert, P.B, Strong, R.K, Clifton, M.C, Edwards, T.E, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2019-03-01
公開日2019-09-11
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Parsing the functional specificity of Siderocalin/Lipocalin 2/NGAL for siderophores and related small-molecule ligands.
J Struct Biol X, 2, 2019
1SKN
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BU of 1skn by Molmil
THE BINDING DOMAIN OF SKN-1 IN COMPLEX WITH DNA: A NEW DNA-BINDING MOTIF
分子名称: DNA (5'-D(*CP*AP*GP*GP*GP*AP*TP*GP*AP*CP*AP*TP*TP*GP*T)-3'), DNA (5'-D(*TP*GP*AP*CP*AP*AP*TP*GP*TP*CP*AP*TP*CP*CP*C)-3'), DNA-BINDING DOMAIN OF SKN-1, ...
著者Rupert, P.B, Daughdrill, G.W, Bowerman, B, Matthews, B.W.
登録日1998-03-30
公開日1998-06-24
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A new DNA-binding motif in the Skn-1 binding domain-DNA complex.
Nat.Struct.Biol., 5, 1998
8TM2
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BU of 8tm2 by Molmil
Preclinical Characterization of Pan-NKG2D Ligand-Binding NKG2D Receptor Decoys
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ...
著者Rupert, P.B, Strong, R.
登録日2023-07-27
公開日2024-04-17
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Preclinical characterization of Pan-NKG2D ligand-binding NKG2D receptor decoys.
Heliyon, 10, 2024
8TLZ
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BU of 8tlz by Molmil
Preclinical Characterization of Pan-NKG2D Ligand-Binding NKG2D Receptor Decoys
分子名称: (2S)-2-hydroxybutanedioic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ...
著者Rupert, P.B, Strong, R.
登録日2023-07-27
公開日2024-04-17
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Preclinical characterization of Pan-NKG2D ligand-binding NKG2D receptor decoys.
Heliyon, 10, 2024
8TM0
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Preclinical Characterization of Pan-NKG2D Ligand-Binding NKG2D Receptor Decoys
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, MHC class I polypeptide-related sequence A, ...
著者Rupert, P.B, Strong, R.
登録日2023-07-27
公開日2024-04-17
実験手法X-RAY DIFFRACTION (3.83 Å)
主引用文献Preclinical characterization of Pan-NKG2D ligand-binding NKG2D receptor decoys.
Heliyon, 10, 2024
1NU4
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U1A RNA binding domain at 1.8 angstrom resolution reveals a pre-organized C-terminal helix
分子名称: MAGNESIUM ION, MALONIC ACID, U1A RNA binding domain
著者Rupert, P.B, Xiao, H, Ferre-D'Amare, A.R.
登録日2003-01-30
公開日2003-02-14
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献U1A RNA-binding domain at 1.8 A resolution.
Acta Crystallogr.,Sect.D, 59, 2003
1D1L
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BU of 1d1l by Molmil
CRYSTAL STRUCTURE OF CRO-F58W MUTANT
分子名称: LAMBDA CRO REPRESSOR, SULFATE ION
著者Rupert, P.B, Mollah, A.K, Mossing, M.C, Matthews, B.W.
登録日1999-09-17
公開日1999-10-06
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The structural basis for enhanced stability and reduced DNA binding seen in engineered second-generation Cro monomers and dimers.
J.Mol.Biol., 296, 2000
1D1M
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CRYSTAL STRUCTURE OF CRO K56-[DGEVK]-F58W MUTANT
分子名称: LAMBDA CRO REPRESSOR
著者Rupert, P.B, Mollah, A.K, Mossing, M.C, Matthews, B.W.
登録日1999-09-17
公開日1999-09-24
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献The structural basis for enhanced stability and reduced DNA binding seen in engineered second-generation Cro monomers and dimers.
J.Mol.Biol., 296, 2000
8UYN
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Fundamental Characterization of Chelated and Crystallized Actinium in a Macromolecular Host
分子名称: LANTHANUM (III) ION, N,N'-butane-1,4-diylbis[1-hydroxy-N-(3-{[(1-hydroxy-6-oxo-1,6-dihydropyridin-2-yl)carbonyl]amino}propyl)-6-oxo-1,6-dihydropyridine-2-carboxamide], Neutrophil gelatinase-associated lipocalin, ...
著者Rupert, P.B, Strong, R.K.
登録日2023-11-13
公開日2024-09-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Actinium chelation and crystallization in a macromolecular scaffold.
Nat Commun, 15, 2024
8UZ9
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BU of 8uz9 by Molmil
Fundamental Characterization of Chelated and Crystallized Actinium in a Macromolecular Host
分子名称: Actinium Ion, CHLORIDE ION, N,N'-butane-1,4-diylbis[1-hydroxy-N-(3-{[(1-hydroxy-6-oxo-1,6-dihydropyridin-2-yl)carbonyl]amino}propyl)-6-oxo-1,6-dihydropyridine-2-carboxamide], ...
著者Rupert, P.B, Strong, R.K.
登録日2023-11-14
公開日2024-09-25
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Actinium chelation and crystallization in a macromolecular scaffold.
Nat Commun, 15, 2024
8VM1
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BU of 8vm1 by Molmil
Structural Elucidation of the Mesothelin Mucin16 CA125 Interaction
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Mesothelin, cleaved form,Mucin-16, ...
著者Rupert, P.B, Strong, R.
登録日2024-01-12
公開日2024-09-04
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Structural elucidation of the mesothelin-mucin-16/CA125 interaction.
Structure, 32, 2024
4JLR
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BU of 4jlr by Molmil
Crystal structure of a designed Respiratory Syncytial Virus Immunogen in complex with Motavizumab
分子名称: Motavizumab Fab heavy chain, Motavizumab Fab light chain, PENTAETHYLENE GLYCOL, ...
著者Rupert, P.B, Correia, B, Schief, W, Strong, R.K.
登録日2013-03-12
公開日2014-02-05
最終更新日2014-12-17
実験手法X-RAY DIFFRACTION (2.71 Å)
主引用文献Proof of principle for epitope-focused vaccine design.
Nature, 507, 2014
5KIC
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BU of 5kic by Molmil
Long-sought stabilization of berkelium(IV) in solution: An anomaly within the heavy actinide series
分子名称: CALIFORNIUM ION, CHLORIDE ION, N,N'-butane-1,4-diylbis[1-hydroxy-N-(3-{[(1-hydroxy-6-oxo-1,6-dihydropyridin-2-yl)carbonyl]amino}propyl)-6-oxo-1,6-dihydropyridine-2-carboxamide], ...
著者Rupert, P.B, Strong, R.K.
登録日2016-06-16
公開日2017-04-26
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Chelation and stabilization of berkelium in oxidation state +IV.
Nat Chem, 9, 2017
5KID
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BU of 5kid by Molmil
Tightening the Recognition of Tetravalent Zr and Th Complexes by the Siderophore-Binding Mammalian Protein Siderocalin for Theranostic Applications
分子名称: CHLORIDE ION, GLYCEROL, N,N'-(butane-1,4-diyl)bis(N-{3-[(2,3-dihydroxybenzene-1-carbonyl)amino]propyl}-2,3-dihydroxybenzamide), ...
著者Rupert, P.B, Strong, R.K.
登録日2016-06-16
公開日2017-04-26
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Engineered Recognition of Tetravalent Zirconium and Thorium by Chelator-Protein Systems: Toward Flexible Radiotherapy and Imaging Platforms.
Inorg Chem, 55, 2016
5KHP
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BU of 5khp by Molmil
Tightening the Recognition of Tetravalent Zr and Th Complexes by the Siderophore-Binding Mammalian Protein Siderocalin for Theranostic Applications
分子名称: GLYCEROL, N,N'-(butane-1,4-diyl)bis(N-{3-[(2,3-dihydroxybenzene-1-carbonyl)amino]propyl}-2,3-dihydroxybenzamide), Neutrophil gelatinase-associated lipocalin, ...
著者Rupert, P.B, Strong, R.K.
登録日2016-06-15
公開日2017-04-26
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Engineered Recognition of Tetravalent Zirconium and Thorium by Chelator-Protein Systems: Toward Flexible Radiotherapy and Imaging Platforms.
Inorg Chem, 55, 2016
5JR8
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BU of 5jr8 by Molmil
Disposal of Iron by a Mutant form of Siderocalin NGAL
分子名称: GLYCEROL, Neutrophil gelatinase-associated lipocalin, PHOSPHATE ION
著者Rupert, P.B, Strong, R.K, Barasch, J, Hollman, M, Deng, R, Hod, E.A, Abergel, R, Allred, B, Xu, K, Darrah, S, Tekabe, Y, Perlstein, A, Bruck, E, Stauber, J, Corbin, K, Buchen, C, Slavkovich, V, Graziano, J, Spitalnik, S, Qiu, A.
登録日2016-05-05
公開日2016-09-28
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Disposal of iron by a mutant form of lipocalin 2.
Nat Commun, 7, 2016
7SJQ
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BU of 7sjq by Molmil
Ex silico engineering of cystine-dense peptides yielding a potent bispecific T-cell engager
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Cystine-dense peptide, GLYCEROL, ...
著者Rupert, P.B, Strong, R.
登録日2021-10-18
公開日2022-06-08
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Ex silico engineering of cystine-dense peptides yielding a potent bispecific T cell engager.
Sci Transl Med, 14, 2022
5JG9
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Crystal structure of the de novo mini protein gEHEE_06
分子名称: CHLORIDE ION, GLYCEROL, de novo design, ...
著者Rupert, P.B, Johnsen, W.A.
登録日2016-04-19
公開日2016-09-28
最終更新日2016-11-02
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Accurate de novo design of hyperstable constrained peptides.
Nature, 538, 2016
6OKD
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BU of 6okd by Molmil
Crystal Structure of human transferrin receptor in complex with a cystine-dense peptide
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ...
著者Finton, K.A.K, Rupert, P.B, Strong, R.K.
登録日2019-04-12
公開日2020-04-15
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献A TfR-Binding Cystine-Dense Peptide Promotes Blood-Brain Barrier Penetration of Bioactive Molecules.
J.Mol.Biol., 432, 2020
8CZ8
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BU of 8cz8 by Molmil
Novel Anti-Mesothelin Antibodies Enable Crystallography of the Intact Mesothelin Ectodo- main and Engineering of Potent, T cell-engaging Bispecific Therapeutics
分子名称: Mesothelin, cleaved form, SULFATE ION, ...
著者Bandaranayake, A.D, Rupert, P.B, Lin, I, Pilat, K, Ruff, R.O, Friend, D.J, Chan, M.K, Clarke, M, Carter, J, Meshinchi, S, Mehlin, C, Olson, J.M, Strong, R.K, Correnti, C.E.
登録日2022-05-24
公開日2023-06-07
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Novel mesothelin antibodies enable crystallography of the intact mesothelin ectodomain and engineering of potent, T cell-engaging bispecific therapeutics
Front. Drug Discov., 3, 2023

 

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