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PDB: 217 results

1F50
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BACTERIORHODOPSIN-BR STATE OF THE E204Q MUTANT AT 1.7 ANGSTROM RESOLUTION
Descriptor: 1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL, 2,10,23-TRIMETHYL-TETRACOSANE, BACTERIORHODOPSIN, ...
Authors:Luecke, H, Schobert, B, Cartailler, J.P, Richter, H.T, Rosengarth, A, Needleman, R, Lanyi, J.K.
Deposit date:2000-06-10
Release date:2000-08-09
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Coupling photoisomerization of retinal to directional transport in bacteriorhodopsin.
J.Mol.Biol., 300, 2000
1F4Z
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BACTERIORHODOPSIN-M PHOTOINTERMEDIATE STATE OF THE E204Q MUTANT AT 1.8 ANGSTROM RESOLUTION
Descriptor: 1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL, 2,10,23-TRIMETHYL-TETRACOSANE, BACTERIORHODOPSIN, ...
Authors:Luecke, H, Schobert, B, Cartailler, J.P, Richter, H.T, Rosengarth, A, Needleman, R, Lanyi, J.K.
Deposit date:2000-06-10
Release date:2000-08-09
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Coupling photoisomerization of retinal to directional transport in bacteriorhodopsin.
J.Mol.Biol., 300, 2000
2ASK
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BU of 2ask by Molmil
Structure of human Artemin
Descriptor: SULFATE ION, artemin
Authors:Silvian, L, Jin, P, Carmillo, P, Boriack-Sjodin, P.A, Pelletier, C, Rushe, M, Gong, B.J, Sah, D, Pepinsky, B, Rossomando, A.
Deposit date:2005-08-23
Release date:2006-06-13
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Artemin crystal structure reveals insights into heparan sulfate binding.
Biochemistry, 45, 2006
1W5X
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HIV-1 protease in complex with fluoro substituted diol-based C2- symmetric inhibitor
Descriptor: (2R,3R,4R,5R)-2,5-BIS[(2,3-DIFLUOROBENZYL)OXY]-3,4-DIHYDROXY-N,N'-BIS[(1S,2R)-2-HYDROXY-2,3-DIHYDRO-1H-INDEN-1-YL]HEXAN EDIAMIDE, POL POLYPROTEIN
Authors:Lindberg, J, Pyring, D, Loewgren, S, Rosenquist, A, Zuccarello, G, Kvarnstroem, I, Zhang, H, Vrang, L, Claesson, B, Hallberg, A, Samuelsson, B, Unge, T.
Deposit date:2004-08-10
Release date:2004-12-22
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Symmetric Fluoro-Substituted Diol-Based HIV Protease Inhibitors. Ortho-Fluorinated and Meta-Fluorinated P1/P1'-Benzyloxy Side Groups Significantly Improve the Antiviral Activity and Preserve Binding Efficacy
Eur.J.Biochem., 271, 2004
1TL4
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Solution structure of Cu(I) HAH1
Descriptor: COPPER (I) ION, Copper transport protein ATOX1
Authors:Anastassopoulou, I, Banci, L, Bertini, I, Cantini, F, Katsari, E, Rosato, A, Structural Proteomics in Europe (SPINE)
Deposit date:2004-06-09
Release date:2004-10-26
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution Structure of the Apo and Copper(I)-Loaded Human Metallochaperone HAH1.
Biochemistry, 43, 2004
1S6U
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BU of 1s6u by Molmil
Solution structure and backbone dynamics of the Cu(I) form of the second metal-binding domain of the Menkes protein ATP7A
Descriptor: COPPER (I) ION, Copper-transporting ATPase 1
Authors:Banci, L, Bertini, I, Del Conte, R, D'Onofrio, M, Rosato, A, Structural Proteomics in Europe (SPINE)
Deposit date:2004-01-27
Release date:2004-04-06
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution Structure and Backbone Dynamics of the Cu(I) and Apo Forms of the Second Metal-Binding Domain of the Menkes Protein ATP7A.
Biochemistry, 43, 2004
1OKD
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BU of 1okd by Molmil
NMR-structure of tryparedoxin 1
Descriptor: TRYPAREDOXIN 1
Authors:Krumme, D, Budde, H, Hecht, H.-J, Menge, U, Ohlenschlager, O, Ross, A, Wissing, J, Wray, V, Flohe, L.
Deposit date:2003-07-22
Release date:2003-08-28
Last modified:2024-10-16
Method:SOLUTION NMR
Cite:NMR studies of the interaction of tryparedoxin with redox-inactive substrate homologues.
Biochemistry, 42, 2003
1S6O
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Solution structure and backbone dynamics of the apo-form of the second metal-binding domain of the Menkes protein ATP7A
Descriptor: Copper-transporting ATPase 1
Authors:Banci, L, Bertini, I, Del Conte, R, D'Onofrio, M, Rosato, A, Structural Proteomics in Europe (SPINE)
Deposit date:2004-01-26
Release date:2004-04-06
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution Structure and Backbone Dynamics of the Cu(I) and Apo Forms of the Second Metal-Binding Domain of the Menkes Protein ATP7A.
Biochemistry, 43, 2004
3DSL
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BU of 3dsl by Molmil
The Three-dimensional Structure of Bothropasin, the Main Hemorrhagic Factor from Bothrops jararaca venom.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, FUROYL-LEUCINE, ...
Authors:Muniz, J.R.C, Ambrosio, A, Selistre-de-Araujo, H.S, Oliva, G, Garratt, R.C, Souza, D.H.F.
Deposit date:2008-07-13
Release date:2008-10-21
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The three-dimensional structure of bothropasin, the main hemorrhagic factor from Bothrops jararaca venom: Insights for a new classification of snake venom metalloprotease subgroups.
Toxicon, 52, 2008
1TL5
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Solution structure of apoHAH1
Descriptor: Copper transport protein ATOX1
Authors:Anastassopoulou, I, Banci, L, Bertini, I, Cantini, F, Katsari, E, Rosato, A, Structural Proteomics in Europe (SPINE)
Deposit date:2004-06-09
Release date:2004-10-26
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution Structure of the Apo and Copper(I)-Loaded Human Metallochaperone HAH1.
Biochemistry, 43, 2004
1MCX
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STRUCTURE OF FULL-LENGTH ANNEXIN A1 IN THE PRESENCE OF CALCIUM
Descriptor: ANNEXIN I, CALCIUM ION
Authors:Luecke, H, Rosengarth, A.
Deposit date:2002-08-06
Release date:2003-03-04
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:A Calcium-driven Conformational Switch of the N-terminaland Core Domains of Annexin A1
J.Mol.Biol., 326, 2003
2FHI
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BU of 2fhi by Molmil
SUBSTRATE ANALOG (IB2) COMPLEX WITH THE HIS 96 ASN SUBSTITUTION OF THE FRAGILE HISTIDINE TRIAD PROTEIN, FHIT
Descriptor: FRAGILE HISTIDINE TRIAD PROTEIN, P1-P2-METHYLENE-P3-THIO-DIADENOSINE TRIPHOSPHATE
Authors:Pace, H.C, Garrison, P.N, Robinson, A.K, Barnes, L.D, Draganescu, A, Rosler, A, Blackburn, G.M, Siprashvili, Z, Croce, C.M, Heubner, K, Brenner, C.
Deposit date:1998-04-01
Release date:1998-06-17
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Genetic, biochemical, and crystallographic characterization of Fhit-substrate complexes as the active signaling form of Fhit.
Proc.Natl.Acad.Sci.USA, 95, 1998
7SSP
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BU of 7ssp by Molmil
Structure of the human COQ7:COQ9 complex by single-particle electron cryo-microscopy, unliganded state
Descriptor: 5-demethoxyubiquinone hydroxylase, mitochondrial, Ubiquinone biosynthesis protein COQ9
Authors:Aydin, H, Frost, A.
Deposit date:2021-11-11
Release date:2022-11-02
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structure and functionality of a multimeric human COQ7:COQ9 complex.
Mol.Cell, 82, 2022
7SSS
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Structure of the NADH-bound human COQ7:COQ9 complex by single-particle electron cryo-microscopy
Descriptor: (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, 2-[(2E,6E,10E,14E,18E,22E,26E)-3,7,11,15,19,23,27,31-OCTAMETHYLDOTRIACONTA-2,6,10,14,18,22,26,30-OCTAENYL]PHENOL, 5-demethoxyubiquinone hydroxylase, ...
Authors:Aydin, H, Frost, A.
Deposit date:2021-11-11
Release date:2022-11-02
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:Structure and functionality of a multimeric human COQ7:COQ9 complex.
Mol.Cell, 82, 2022
7TRJ
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BU of 7trj by Molmil
The eukaryotic translation initiation factor 2B from Homo sapiens with a H160D mutation in the beta subunit
Descriptor: Translation initiation factor eIF-2B subunit alpha, Translation initiation factor eIF-2B subunit beta, Translation initiation factor eIF-2B subunit delta, ...
Authors:Wang, L, Schoof, M, Lawrence, R, Boone, M, Frost, A, Walter, P.
Deposit date:2022-01-29
Release date:2022-04-27
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:A point mutation in the nucleotide exchange factor eIF2B constitutively activates the integrated stress response by allosteric modulation.
Elife, 11, 2022
2K1R
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BU of 2k1r by Molmil
The solution NMR structure of the complex between MNK1 and HAH1 mediated by Cu(I)
Descriptor: COPPER (II) ION, Copper transport protein ATOX1, Copper-transporting ATPase 1
Authors:Bertini, I, Banci, L.C, Felli, I.C, Pavelkova, A, Rosato, A, Structural Proteomics in Europe (SPINE)
Deposit date:2008-03-14
Release date:2009-03-31
Last modified:2024-10-16
Method:SOLUTION NMR
Cite:The solution structure of the copper(I)-mediated complex between the first soluble domain of the Menkes protein and the metallochaperone HAH1.
To be Published
2G9O
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BU of 2g9o by Molmil
Solution structure of the apo form of the third metal-binding domain of ATP7A protein (Menkes Disease protein)
Descriptor: Copper-transporting ATPase 1
Authors:Banci, L, Bertini, I, Cantini, F, DellaMalva, N, Rosato, A, Herrmann, T, Wuthrich, K, Structural Proteomics in Europe (SPINE)
Deposit date:2006-03-07
Release date:2006-08-01
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure and intermolecular interactions of the third metal-binding domain of ATP7A, the Menkes disease protein.
J.Biol.Chem., 281, 2006
2GGP
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BU of 2ggp by Molmil
Solution structure of the Atx1-Cu(I)-Ccc2a complex
Descriptor: COPPER (I) ION, Metal homeostasis factor ATX1, Probable copper-transporting ATPase
Authors:Banci, L, Bertini, I, Cantini, F, Felli, I.C, Gonnelli, L, Hadjiliadis, N, Pierattelli, R, Rosato, A, Voulgaris, P, Structural Proteomics in Europe (SPINE)
Deposit date:2006-03-24
Release date:2006-08-08
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:The Atx1-Ccc2 complex is a metal-mediated protein-protein interaction.
Nat.Chem.Biol., 2, 2006
2GA7
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BU of 2ga7 by Molmil
Solution structure of the copper(I) form of the third metal-binding domain of ATP7A protein (menkes disease protein)
Descriptor: COPPER (I) ION, Copper-transporting ATPase 1
Authors:Banci, L, Bertini, I, Cantini, F, DellaMalva, N, Rosato, A, Herrmann, T, Wuthrich, K, Structural Proteomics in Europe (SPINE)
Deposit date:2006-03-08
Release date:2006-08-01
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure and intermolecular interactions of the third metal-binding domain of ATP7A, the Menkes disease protein.
J.Biol.Chem., 281, 2006
2FZI
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BU of 2fzi by Molmil
New Insights into DHFR Interactions: Analysis of Pneumocystis carinii and Mouse DHFR Complexes with NADPH and Two Highly Potent Trimethoprim Derivatives
Descriptor: 2,4-DIAMINO-5-[3',4'-DIMETHOXY-5'-(5-CARBOXYL-1-PENTYNYL)]BENZYL PYRIMIDINE, Dihydrofolate reductase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Cody, V, Pace, J, Chisum, K, Rosowsky, A.
Deposit date:2006-02-09
Release date:2006-12-26
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:New insights into DHFR interactions: analysis of Pneumocystis carinii and mouse DHFR complexes with NADPH and two highly potent 5-(omega-carboxy(alkyloxy) trimethoprim derivatives reveals conformational correlations with activity and novel parallel ring stacking interactions.
Proteins, 65, 2006
2FZH
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New Insights into Dihydrofolate Reductase Interactions: Analysis of Pneumocystis carinii and Mouse DHFR Complexes with NADPH and Two Highly Potent Trimethoprim Derivatives
Descriptor: 2,4-DIAMINO-5-[2-METHOXY-5-(4-CARBOXYBUTYLOXY)BENZYL]PYRIMIDINE, Dihydrofolate reductase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Cody, V, Pace, J, Chisum, K, Rosowsky, A.
Deposit date:2006-02-09
Release date:2006-12-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:New insights into DHFR interactions: analysis of Pneumocystis carinii and mouse DHFR complexes with NADPH and two highly potent 5-(omega-carboxy(alkyloxy) trimethoprim derivatives reveals conformational correlations with activity and novel parallel ring stacking interactions.
Proteins, 65, 2006
2FZJ
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New Insights into DHFR Interactions: Analysis of Pneumocystis carinii and Mouse DHFR Complexes with NADPH and Two Highly Potent Trimethoprim Derivatives
Descriptor: 2,4-DIAMINO-5-[3',4'-DIMETHOXY-5'-(5-CARBOXYL-1-PENTYNYL)]BENZYL PYRIMIDINE, Dihydrofolate reductase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Cody, V, Pace, J, Chisum, K, Rosowsky, A.
Deposit date:2006-02-09
Release date:2006-12-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:New insights into DHFR interactions: analysis of Pneumocystis carinii and mouse DHFR complexes with NADPH and two highly potent 5-(omega-carboxy(alkyloxy) trimethoprim derivatives reveals conformational correlations with activity and novel parallel ring stacking interactions.
Proteins, 65, 2006
7L7G
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Electron cryo-microscopy of the eukaryotic translation initiation factor 2B from Homo sapiens (updated model of PDB ID: 6CAJ)
Descriptor: 2-(4-chloranylphenoxy)-~{N}-[4-[2-(4-chloranylphenoxy)ethanoylamino]cyclohexyl]ethanamide, Translation initiation factor eIF-2B subunit alpha, Translation initiation factor eIF-2B subunit beta, ...
Authors:Tsai, J.C, Miller-Vedam, L.E, Anand, A, Jaishankar, P, Nguyen, H.C, Wang, L, Renslo, A.R, Frost, A, Walter, P.
Deposit date:2020-12-28
Release date:2021-03-24
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3 Å)
Cite:eIF2B conformation and assembly state regulates the integrated stress response.
Elife, 10, 2021
2JK5
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Potassium Channel KcsA in complex with Tetrabutylammonium in high K
Descriptor: (2S)-3-HYDROXY-2-(NONANOYLOXY)PROPYL LAURATE, ANTIBODY FAB FRAGMENT HEAVY CHAIN, ANTIBODY FAB FRAGMENT LIGHT CHAIN, ...
Authors:Lenaeus, M.J, Focia, P.J, Wagner, T, Gross, A.
Deposit date:2008-08-15
Release date:2009-11-17
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structures of Kcsa in Complex with Symmetrical Quaternary Ammonium Compounds Reveal a Hydrophobic Binding Site.
Biochemistry, 53, 2014
7JK9
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Helical filaments of plant light-dependent protochlorophyllide oxidoreductase (LPOR) bound to NADPH, Pchlide, and membrane
Descriptor: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Protochlorophyllide, ...
Authors:Nguyen, H.C, Gabruk, M, Frost, A.
Deposit date:2020-07-28
Release date:2021-03-17
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Photocatalytic LPOR forms helical lattices that shape membranes for chlorophyll synthesis.
Nat.Plants, 7, 2021

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