Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 84 件

4RIL
DownloadVisualize
BU of 4ril by Molmil
Structure of the amyloid forming segment, GAVVTGVTAVA, from the NAC domain of Parkinson's disease protein alpha-synuclein, residues 68-78, determined by electron diffraction
分子名称: Alpha-synuclein
著者Rodriguez, J.A, Ivanova, M, Sawaya, M.R, Cascio, D, Reyes, F, Shi, D, Johnson, L, Guenther, E, Sangwan, S, Hattne, J, Nannenga, B, Brewster, A.S, Messerschmidt, M, Boutet, S, Sauter, N.K, Gonen, T, Eisenberg, D.S.
登録日2014-10-06
公開日2015-08-26
最終更新日2023-09-20
実験手法ELECTRON CRYSTALLOGRAPHY (1.43 Å)
主引用文献Structure of the toxic core of alpha-synuclein from invisible crystals.
Nature, 525, 2015
5VOS
DownloadVisualize
BU of 5vos by Molmil
VGSNKGAIIGL from Amyloid Beta determined by MicroED
分子名称: Amyloid beta A4 protein
著者Rodriguez, J.A, Sawaya, M.R, Cascio, D, Eisenberg, D.S, Griner, S.L, Gonen, T.
登録日2017-05-03
公開日2018-01-03
最終更新日2024-03-13
実験手法ELECTRON CRYSTALLOGRAPHY (1.42 Å)
主引用文献Common fibrillar spines of amyloid-beta and human islet amyloid polypeptide revealed by microelectron diffraction and structure-based inhibitors.
J. Biol. Chem., 293, 2018
6WX1
DownloadVisualize
BU of 6wx1 by Molmil
Antigen Binding Fragment of OKT9
分子名称: GLYCEROL, OKT9 Fab Heavy Chain, OKT9 Fab Light Chain
著者Rodriguez, J.A, Helguera, G, Sawaya, M, Cascio, D, Collazo, M, Flores, M, Zink, S, Ferrero, S, Payes, C, Fuentes, D, Short, C.
登録日2020-05-09
公開日2021-05-26
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Antibody-Based Inhibition of Pathogenic New World Hemorrhagic Fever Mammarenaviruses by Steric Occlusion of the Human Transferrin Receptor 1 Apical Domain.
J.Virol., 95, 2021
5K2H
DownloadVisualize
BU of 5k2h by Molmil
Structure of GNNQQNY from yeast prion Sup35 in space group P212121 determined by MicroED
分子名称: Eukaryotic peptide chain release factor GTP-binding subunit
著者Rodriguez, J.A, Sawaya, M.R, Cascio, D, Eisenberg, D.S.
登録日2016-05-18
公開日2016-09-14
最終更新日2024-03-06
実験手法ELECTRON CRYSTALLOGRAPHY (1.05 Å)
主引用文献Ab initio structure determination from prion nanocrystals at atomic resolution by MicroED.
Proc.Natl.Acad.Sci.USA, 113, 2016
5K2F
DownloadVisualize
BU of 5k2f by Molmil
Structure of NNQQNY from yeast prion Sup35 with cadmium acetate determined by MicroED
分子名称: ACETATE ION, CADMIUM ION, Eukaryotic peptide chain release factor GTP-binding subunit
著者Rodriguez, J.A, Sawaya, M.R, Cascio, D, Eisenberg, D.S.
登録日2016-05-18
公開日2016-09-14
最終更新日2024-03-06
実験手法ELECTRON CRYSTALLOGRAPHY (1 Å)
主引用文献Ab initio structure determination from prion nanocrystals at atomic resolution by MicroED.
Proc.Natl.Acad.Sci.USA, 113, 2016
5K2E
DownloadVisualize
BU of 5k2e by Molmil
Structure of NNQQNY from yeast prion Sup35 with zinc acetate determined by MicroED
分子名称: ACETIC ACID, Eukaryotic peptide chain release factor GTP-binding subunit, ZINC ION
著者Rodriguez, J.A, Sawaya, M.R, Cascio, D, Eisenberg, D.S.
登録日2016-05-18
公開日2016-09-14
最終更新日2024-03-06
実験手法ELECTRON CRYSTALLOGRAPHY (1 Å)
主引用文献Ab initio structure determination from prion nanocrystals at atomic resolution by MicroED.
Proc.Natl.Acad.Sci.USA, 113, 2016
5K2G
DownloadVisualize
BU of 5k2g by Molmil
Structure of GNNQQNY from yeast prion Sup35 in space group P21 determined by MicroED
分子名称: Eukaryotic peptide chain release factor GTP-binding subunit
著者Rodriguez, J.A, Sawaya, M.R, Cascio, D, Eisenberg, D.S.
登録日2016-05-18
公開日2016-09-14
最終更新日2024-03-06
実験手法ELECTRON CRYSTALLOGRAPHY (1.1 Å)
主引用文献Ab initio structure determination from prion nanocrystals at atomic resolution by MicroED.
Proc.Natl.Acad.Sci.USA, 113, 2016
8QIC
DownloadVisualize
BU of 8qic by Molmil
Structure-based identification of salicylic acid derivatives as malarial threonyl tRNA-synthetase inhibitors
分子名称: 2-oxidanyl-5-[[4-(phenylmethyl)phenyl]sulfamoyl]benzoic acid, GLYCEROL, Threonine--tRNA ligase, ...
著者Rodriguez, J.A, Parisini, E.
登録日2023-09-13
公開日2024-04-10
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure-based identification of salicylic acid derivatives as malarial threonyl tRNA-synthetase inhibitors.
Plos One, 19, 2024
4ZNN
DownloadVisualize
BU of 4znn by Molmil
MicroED structure of the segment, GVVHGVTTVA, from the A53T familial mutant of Parkinson's disease protein, alpha-synuclein residues 47-56
分子名称: Alpha-synuclein
著者Rodriguez, J.A, Ivanova, M, Sawaya, M.R, Cascio, D, Reyes, F, Shi, D, Johnson, L, Guenther, E, Sangwan, S, Hattne, J, Nannenga, B, Brewster, A.S, Messerschmidt, M, Boutet, S, Sauter, N.K, Gonen, T, Eisenberg, D.S.
登録日2015-05-05
公開日2015-09-09
最終更新日2024-03-06
実験手法ELECTRON CRYSTALLOGRAPHY (1.41 Å)
主引用文献Structure of the toxic core of alpha-synuclein from invisible crystals.
Nature, 525, 2015
1HLK
DownloadVisualize
BU of 1hlk by Molmil
METALLO-BETA-LACTAMASE FROM BACTEROIDES FRAGILIS IN COMPLEX WITH A TRICYCLIC INHIBITOR
分子名称: 7,8-DIHYDROXY-1-METHOXY-3-METHYL-10-OXO-4,10-DIHYDRO-1H,3H-PYRANO[4,3-B]CHROMENE-9-CARBOXYLIC ACID, BETA-LACTAMASE, TYPE II, ...
著者Payne, D.J, Hueso-Rodriguez, J.A, Boyd, H, Concha, N.O, Janson, C.A, Gilpin, M, Bateson, J.H, Chever, C, Niconovich, N.L, Pearson, S, Rittenhouse, S, Tew, D, Diez, E, Perez, P, de la Fuente, J, Rees, M, Rivera-Sagredo, A.
登録日2000-12-01
公開日2001-11-30
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Identification of a series of tricyclic natural products as potent broad spectrum inhibitors of metallo-beta-lactamases
Antimicrob.Agents Chemother., 46, 2002
6M9I
DownloadVisualize
BU of 6m9i by Molmil
L-GSTSTA from degenerate octameric repeats in InaZ, residues 707-712
分子名称: Ice nucleation protein
著者Zee, C, Glynn, C, Gallagher-Jones, M, Miao, J, Santiago, C.G, Cascio, D, Gonen, T, Sawaya, M.R, Rodriguez, J.A.
登録日2018-08-23
公開日2019-03-27
最終更新日2024-03-13
実験手法ELECTRON CRYSTALLOGRAPHY (0.9 Å)
主引用文献Homochiral and racemic MicroED structures of a peptide repeat from the ice-nucleation protein InaZ.
IUCrJ, 6, 2019
8G2V
DownloadVisualize
BU of 8g2v by Molmil
Cryo-EM structure of recombinant human LECT2 amyloid fibril core
分子名称: Leukocyte cell-derived chemotaxin-2
著者Richards, L.S, Flores, M.D, Zink, S, Schibrowsky, N.A, Sawaya, M.R, Rodriguez, J.A.
登録日2023-02-06
公開日2023-08-16
最終更新日2023-11-15
実験手法ELECTRON MICROSCOPY (2.715 Å)
主引用文献Cryo-EM structure of a human LECT2 amyloid fibril reveals a network of polar ladders at its core.
Structure, 31, 2023
6AXZ
DownloadVisualize
BU of 6axz by Molmil
Segment from bank vole prion protein 168-176 QYNNQNNFV
分子名称: Major prion protein
著者Glynn, C, Rodriguez, J.A, Boyer, D.R, Gallagher-Jones, M.
登録日2017-09-07
公開日2018-01-17
最終更新日2024-03-13
実験手法ELECTRON CRYSTALLOGRAPHY (0.75 Å)
主引用文献Sub-angstrom cryo-EM structure of a prion protofibril reveals a polar clasp.
Nat. Struct. Mol. Biol., 25, 2018
6EEX
DownloadVisualize
BU of 6eex by Molmil
L-GSTSTA from degenerate octameric repeats in InaZ, residues 707-712
分子名称: L-GSTSTA from ice nucleaction protein, inaZ
著者Zee, C, Glynn, C, Gallagher-Jones, M, Miao, J, Santiago, C.G, Cascio, D, Gonen, T, Sawaya, M.R, Rodriguez, J.A.
登録日2018-08-15
公開日2019-04-03
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Homochiral and racemic MicroED structures of a peptide repeat from the ice-nucleation protein InaZ.
IUCrJ, 6, 2019
8SPA
DownloadVisualize
BU of 8spa by Molmil
Structural insights into cellular control of the human CPEB3 prion, functionally regulated by a labile-amyloid-forming segment
分子名称: Cytoplasmic polyadenylation element-binding protein 3
著者Flores, M.D, Sawaya, M.R, Boyer, D.R, Zink, S, Fioriti, L, Rodriguez, J.A.
登録日2023-05-02
公開日2024-05-08
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structure of a reversible amyloid fibril formed by the CPEB3 prion-like domain reveals a core sequence involved in translational regulation
To Be Published
1UXM
DownloadVisualize
BU of 1uxm by Molmil
A4V mutant of human SOD1
分子名称: COPPER (II) ION, SUPEROXIDE DISMUTASE [CU-ZN], ZINC ION
著者Hough, M.A, Grossmann, J.G, Antonyuk, S.V, Strange, R.W, Doucette, P.A, Rodriguez, J.A, Whitson, L.J, Hart, P.J, Hayward, L.J, Valentine, J.S, Hasnain, S.S.
登録日2004-02-26
公開日2004-03-19
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Dimer Destabilization in Superoxide Dismutase May Result in Disease-Causing Properties: Structures of Motor Neuron Disease Mutants
Proc.Natl.Acad.Sci.USA, 101, 2004
1UXL
DownloadVisualize
BU of 1uxl by Molmil
I113T mutant of human SOD1
分子名称: COPPER (II) ION, SULFATE ION, SUPEROXIDE DISMUTASE [CU-ZN], ...
著者Hough, M.A, Grossmann, J.G, Antonyuk, S.V, Strange, R.W, Doucette, P.A, Rodriguez, J.A, Whitson, L.J, Hart, P.J, Hayward, L.J, Valentine, J.S, Hasnain, S.S.
登録日2004-02-25
公開日2004-03-19
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Dimer Destabilization in Superoxide Dismutase May Result in Disease-Causing Properties: Structures of Motor Neuron Disease Mutants
Proc.Natl.Acad.Sci.USA, 101, 2004
5V5C
DownloadVisualize
BU of 5v5c by Molmil
VQIINK, Structure of the amyloid-spine from microtubule associated protein tau Repeat 2
分子名称: Microtubule-associated protein tau
著者Seidler, P.M, Sawaya, M.R, Rodriguez, J.A, Eisenberg, D.S, Cascio, D, Boyer, D.R.
登録日2017-03-14
公開日2018-02-07
最終更新日2024-03-13
実験手法ELECTRON CRYSTALLOGRAPHY (1.25 Å)
主引用文献Structure-based inhibitors of tau aggregation.
Nat Chem, 10, 2018
5V5B
DownloadVisualize
BU of 5v5b by Molmil
KVQIINKKLD, Structure of the amyloid spine from microtubule associated protein tau Repeat 2
分子名称: Microtubule-associated protein tau
著者Seidler, P.M, Sawaya, M.R, Rodriguez, J.A, Eisenberg, D.S, Cascio, D, Boyer, D.R.
登録日2017-03-13
公開日2018-02-07
最終更新日2024-03-13
実験手法ELECTRON CRYSTALLOGRAPHY (1.5 Å)
主引用文献Structure-based inhibitors of tau aggregation.
Nat Chem, 10, 2018
5FOZ
DownloadVisualize
BU of 5foz by Molmil
De novo structure of the binary mosquito larvicide BinAB at pH 10
分子名称: LARVICIDAL TOXIN PROTEIN, SODIUM ION, TOXIN
著者Colletier, J.P, Sawaya, M.R, Gingery, M, Rodriguez, J.A, Cascio, D, Brewster, A.S, Michels-Clark, T, Boutet, S, Williams, G.J, Messerschmidt, M, DePonte, D.P, Sierra, R.G, Laksmono, H, Koglin, J.E, Hunter, M.S, W Park, H, Uervirojnangkoorn, M, Bideshi, D.L, Brunger, A.T, Federici, B.A, Sauter, N.K, Eisenberg, D.S.
登録日2015-11-26
公開日2016-10-05
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献De Novo Phasing with X-Ray Laser Reveals Mosquito Larvicide Binab Structure.
Nature, 539, 2016
5G37
DownloadVisualize
BU of 5g37 by Molmil
MR structure of the binary mosquito larvicide BinAB at pH 5
分子名称: 41.9 KDA INSECTICIDAL TOXIN, LARVICIDAL TOXIN 51 KDA PROTEIN
著者Colletier, J.P, Sawaya, M.R, Gingery, M, Rodriguez, J.A, Cascio, D, Brewster, A.S, Michels-Clark, T, Boutet, S, Williams, G.J, Messerschmidt, M, DePonte, D.P, Sierra, R.G, Laksmono, H, Koglin, J.E, Hunter, M.S, W Park, H, Uervirojnangkoorn, M, Bideshi, D.L, Brunger, A.T, Federici, B.A, Sauter, N.K, Eisenberg, D.S.
登録日2016-04-24
公開日2016-10-05
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献De Novo Phasing with X-Ray Laser Reveals Mosquito Larvicide Binab Structure.
Nature, 539, 2016
8T1N
DownloadVisualize
BU of 8t1n by Molmil
Micro-ED Structure of a Novel Domain of Unknown Function Solved with AlphaFold
分子名称: DUF1842 domain-containing protein
著者Miller, J.E, Cascio, D, Sawaya, M.R, Cannon, K.A, Rodriguez, J.A, Yeates, T.O.
登録日2023-06-02
公開日2024-01-17
最終更新日2024-04-10
実験手法ELECTRON CRYSTALLOGRAPHY (3 Å)
主引用文献AlphaFold-assisted structure determination of a bacterial protein of unknown function using X-ray and electron crystallography.
Acta Crystallogr D Struct Biol, 80, 2024
5FOY
DownloadVisualize
BU of 5foy by Molmil
De novo structure of the binary mosquito larvicide BinAB at pH 7
分子名称: 41.9 KDA INSECTICIDAL TOXIN, LARVICIDAL TOXIN 51 KDA PROTEIN
著者Colletier, J.P, Sawaya, M.R, Gingery, M, Rodriguez, J.A, Cascio, D, Brewster, A.S, Michels-Clark, T, Boutet, S, Williams, G.J, Messerschmidt, M, DePonte, D.P, Sierra, R.G, Laksmono, H, Koglin, J.E, Hunter, M.S, W Park, H, Uervirojnangkoorn, M, Bideshi, D.L, Brunger, A.T, Federici, B.A, Sauter, N.K, Eisenberg, D.S.
登録日2015-11-26
公開日2016-10-05
最終更新日2019-08-28
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献De Novo Phasing with X-Ray Laser Reveals Mosquito Larvicide Binab Structure.
Nature, 539, 2016
6UOS
DownloadVisualize
BU of 6uos by Molmil
MicroED structure of OsPYL/RCAR5 (24-29) at 6 e-/A^2
分子名称: Abscisic acid receptor PYL5
著者Gallagher-Jones, M, Richards, L.S, Lee, S, Rodriguez, J.A.
登録日2019-10-15
公開日2020-05-13
最終更新日2024-03-13
実験手法ELECTRON CRYSTALLOGRAPHY (0.9 Å)
主引用文献Atomic structures determined from digitally defined nanocrystalline regions
Iucrj, 7, 2020
6UOW
DownloadVisualize
BU of 6uow by Molmil
MicroED structure of OsPYL/RCAR5 (24-29) at 12 e-/A^2
分子名称: Abscisic acid receptor PYL5
著者Gallagher-Jones, M, Richards, L.S, Lee, S, Rodriguez, J.A.
登録日2019-10-15
公開日2020-05-13
最終更新日2024-03-13
実験手法ELECTRON CRYSTALLOGRAPHY (1.2 Å)
主引用文献Atomic structures determined from digitally defined nanocrystalline regions
Iucrj, 7, 2020

 

1234>

226707

件を2024-10-30に公開中

PDB statisticsPDBj update infoContact PDBjnumon