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PDB: 27 results

1AOI
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BU of 1aoi by Molmil
COMPLEX BETWEEN NUCLEOSOME CORE PARTICLE (H3,H4,H2A,H2B) AND 146 BP LONG DNA FRAGMENT
Descriptor: HISTONE H2A, HISTONE H2B, HISTONE H3, ...
Authors:Luger, K, Maeder, A.W, Richmond, R.K, Sargent, D.F, Richmond, T.J.
Deposit date:1997-07-03
Release date:1998-09-30
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of the nucleosome core particle at 2.8 A resolution.
Nature, 389, 1997
1HBX
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BU of 1hbx by Molmil
Ternary Complex of SAP-1 and SRF with specific SRE DNA
Descriptor: 5'-D(*CP*AP*CP*AP*CP*CP*GP*GP*AP*AP*GP*TP*CP* CP*TP*AP*AP*TP*TP*AP*GP*GP*CP*CP*AP*T)-3', 5'-D(*GP*AP*TP*GP*GP*CP*CP*TP*AP*AP*TP*TP*AP* GP*GP*AP*CP*TP*TP*CP*CP*GP*GP*TP*G)-3', ETS-DOMAIN PROTEIN ELK-4, ...
Authors:Hassler, M, Richmond, T.J.
Deposit date:2001-04-20
Release date:2001-06-27
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:The B-Box Dominates Sap-1/Srf Interactions in the Structure of the Ternary Complex
Embo J., 20, 2001
2DGC
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BU of 2dgc by Molmil
GCN4 BASIC DOMAIN, LEUCINE ZIPPER COMPLEXED WITH ATF/CREB SITE DNA
Descriptor: DNA (5'-D(*TP*GP*GP*AP*GP*AP*TP*GP*AP*CP*GP*TP*CP*AP*TP*CP*T P*CP*C)-3'), PROTEIN (GCN4)
Authors:Keller, W, Koenig, P, Richmond, T.J.
Deposit date:1995-09-28
Release date:1996-03-08
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of a bZIP/DNA complex at 2.2 A: determinants of DNA specific recognition.
J.Mol.Biol., 254, 1995
1KX5
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BU of 1kx5 by Molmil
X-Ray Structure of the Nucleosome Core Particle, NCP147, at 1.9 A Resolution
Descriptor: CHLORIDE ION, DNA (5'(ATCAATATCCACCTGCAGATACTACCAAAAGTGTATTTGGAAACTGCTCCATCAAAAGGCATGTTCAGCTGGAATCCAGCTGAACATGCCTTTTGATGGAGCAGTTTCCAAATACACTTTTGGTAGTATCTGCAGGTGGATATTGAT)3'), DNA (5'(ATCAATATCCACCTGCAGATACTACCAAAAGTGTATTTGGAAACTGCTCCATCAAAAGGCATGTTCAGCTGGATTCCAGCTGAACATGCCTTTTGATGGAGCAGTTTCCAAATACACTTTTGGTAGTATCTGCAGGTGGATATTGAT)3'), ...
Authors:Davey, C.A, Sargent, D.F, Luger, K, Maeder, A.W, Richmond, T.J.
Deposit date:2002-01-31
Release date:2002-12-25
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Solvent Mediated Interactions in the Structure of the Nucleosome Core Particle at 1.9 A Resolution
J.Mol.Biol., 319, 2002
5OMX
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BU of 5omx by Molmil
X-ray Structure of the H2A-N38C Nucleosome Core Particle
Descriptor: CHLORIDE ION, DNA (147-MER), Histone H2A, ...
Authors:Frouws, T.D, Richmond, T.J.
Deposit date:2017-08-02
Release date:2017-11-15
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Site-Specific Disulfide Crosslinked Nucleosomes with Enhanced Stability.
J. Mol. Biol., 430, 2018
5ONG
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BU of 5ong by Molmil
X-Ray crystal structure of a nucleosome core particle with its DNA site-specifically crosslinked to the histone octamer
Descriptor: CHLORIDE ION, DNA (147-MER), Histone H2A, ...
Authors:Frouws, T.D, Barth, P.D, Richmond, T.J.
Deposit date:2017-08-03
Release date:2017-11-22
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.797 Å)
Cite:Site-Specific Disulfide Crosslinked Nucleosomes with Enhanced Stability.
J. Mol. Biol., 430, 2018
5OY7
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BU of 5oy7 by Molmil
Structure of the 4_601_157 tetranucleosome (P1 form)
Descriptor: CHLORIDE ION, DNA (619-MER), Histone H2A, ...
Authors:Ekundayo, B, Richmond, T.J, Schalch, T.
Deposit date:2017-09-07
Release date:2017-09-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (5.774 Å)
Cite:Capturing Structural Heterogeneity in Chromatin Fibers.
J. Mol. Biol., 429, 2017
5ONW
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BU of 5onw by Molmil
X-Ray crystal structure of a nucleosome core particle with its DNA site-specifically crosslinked to the histone octamer and the two H2A/H2B dimers crosslinked via H2A N38C
Descriptor: CHLORIDE ION, DNA (147-MER), Histone H2A, ...
Authors:Frouws, T.D, Barth, P.D, Richmond, T.J.
Deposit date:2017-08-04
Release date:2017-11-22
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Site-Specific Disulfide Crosslinked Nucleosomes with Enhanced Stability.
J. Mol. Biol., 430, 2018
3WEE
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BU of 3wee by Molmil
Structure of the full-length yeast Arp7-Arp9 Heterodimer
Descriptor: 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, Actin-like protein ARP9, Actin-related protein 7, ...
Authors:Lobsiger, J, Richmond, T.J.
Deposit date:2013-07-06
Release date:2014-02-26
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structure of the full-length yeast Arp7-Arp9 heterodimer.
Acta Crystallogr.,Sect.D, 70, 2014
1KX3
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BU of 1kx3 by Molmil
X-Ray Structure of the Nucleosome Core Particle, NCP146, at 2.0 A Resolution
Descriptor: DNA (5'(ATCAATATCCACCTGCAGATTCTACCAAAAGTGTATTTGGAAACTGCTCCATCAAAAGGCATGTTCAGCTGAATTCAGCTGAACATGCCTTTTGATGGAGCAGTTTCCAAATACACTTTTGGTAGAATCTGCAGGTGGATATTGAT)3'), MANGANESE (II) ION, histone H2A.1, ...
Authors:Davey, C.A, Sargent, D.F, Luger, K, Maeder, A.W, Richmond, T.J.
Deposit date:2002-01-31
Release date:2002-12-25
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Solvent Mediated Interactions in the Structure of the Nucleosome Core Particle at 1.9 A Resolution
J.Mol.Biol., 319, 2002
1KX4
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BU of 1kx4 by Molmil
X-Ray Structure of the Nucleosome Core Particle, NCP146b, at 2.6 A Resolution
Descriptor: CHLORIDE ION, DNA (5'(ATCTCCAAATATCCCTTGCGGATCGTAGAAAAAGTGTGTCAAACTGCGCTATCAAAGGGAAACTTCAACTGAATTCAGTTGAAGTTTCCCTTTGATAGCGCAGTTTGACACACTTTTTCTACGATCCGCAAGGGATATTTGGAGAT)3'), MANGANESE (II) ION, ...
Authors:Davey, C.A, Sargent, D.F, Luger, K, Maeder, A.W, Richmond, T.J.
Deposit date:2002-01-31
Release date:2002-12-25
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Solvent Mediated Interactions in the Structure of the Nucleosome Core Particle at 1.9 A Resolution
J.Mol.Biol., 319, 2002
2Y9Y
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BU of 2y9y by Molmil
Chromatin Remodeling Factor ISW1a(del_ATPase)
Descriptor: IMITATION SWITCH PROTEIN 1 (DEL_ATPASE), ISWI ONE COMPLEX PROTEIN 3
Authors:Yamada, K, Frouws, T.D, Angst, B, Fitzgerald, D.J, DeLuca, C, Schimmele, K, Sargent, D.F, Richmond, T.J.
Deposit date:2011-02-17
Release date:2011-04-20
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Structure and Mechanism of the Chromatin Remodelling Factor Isw1A.
Nature, 472, 2011
2Y9Z
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BU of 2y9z by Molmil
Chromatin Remodeling Factor ISW1a(del_ATPase) in DNA complex
Descriptor: I-DNA/E-DNA, IMITATION SWITCH PROTEIN 1 (DEL_ATPASE), ISWI ONE COMPLEX PROTEIN 3
Authors:Yamada, K, Frouws, T.D, Angst, B, Fitzgerald, D.J, DeLuca, C, Schimmele, K, Sargent, D.F, Richmond, T.J.
Deposit date:2011-02-17
Release date:2011-04-20
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.601 Å)
Cite:Structure and Mechanism of the Chromatin Remodelling Factor Isw1A
Nature, 472, 2011
5F99
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BU of 5f99 by Molmil
X-ray Structure of the MMTV-A Nucleosome Core Particle
Descriptor: CHLORIDE ION, DNA (147-MER), Histone H2A type 1, ...
Authors:Frouws, T.D, Richmond, T.J.
Deposit date:2015-12-09
Release date:2016-02-03
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.63 Å)
Cite:X-ray structure of the MMTV-A nucleosome core.
Proc.Natl.Acad.Sci.USA, 113, 2016
1MNM
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BU of 1mnm by Molmil
YEAST MATALPHA2/MCM1/DNA TERNARY TRANSCRIPTION COMPLEX CRYSTAL STRUCTURE
Descriptor: DNA (STE6 OPERATOR DNA), PROTEIN (MAT ALPHA-2 TRANSCRIPTIONAL REPRESSOR), PROTEIN (MCM1 TRANSCRIPTIONAL REGULATOR)
Authors:Tan, S, Richmond, T.J.
Deposit date:1997-11-03
Release date:1998-03-18
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal structure of the yeast MATalpha2/MCM1/DNA ternary complex.
Nature, 391, 1998
1JFU
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BU of 1jfu by Molmil
CRYSTAL STRUCTURE OF THE SOLUBLE DOMAIN OF TLPA FROM BRADYRHIZOBIUM JAPONICUM
Descriptor: THIOL:DISULFIDE INTERCHANGE PROTEIN TLPA
Authors:Capitani, G, Rossmann, R, Sargent, D.F, Gruetter, M.G, Richmond, T.J, Hennecke, H.
Deposit date:2001-06-22
Release date:2001-09-19
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of the soluble domain of a membrane-anchored thioredoxin-like protein from Bradyrhizobium japonicum reveals unusual properties.
J.Mol.Biol., 311, 2001
1KSO
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BU of 1kso by Molmil
CRYSTAL STRUCTURE OF APO S100A3
Descriptor: S100 CALCIUM-BINDING PROTEIN A3
Authors:Mittl, P.R, Fritz, G, Sargent, D.F, Richmond, T.J, Heizmann, C.W, Grutter, M.G.
Deposit date:2002-01-14
Release date:2002-07-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Metal-free MIRAS phasing: structure of apo-S100A3.
Acta Crystallogr.,Sect.D, 58, 2002
1SRS
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BU of 1srs by Molmil
SERUM RESPONSE FACTOR (SRF) CORE COMPLEXED WITH SPECIFIC SRE DNA
Descriptor: DNA (5'-D(*CP*CP*(5IU)P*TP*CP*CP*TP*AP*AP*TP*TP*AP*GP*GP*CP*CP*AP*TP*G)-3'), DNA (5'-D(*CP*CP*AP*TP*GP*GP*CP*CP*TP*AP*AP*TP*TP*AP*GP*GP*A P*AP*G)-3'), PROTEIN (SERUM RESPONSE FACTOR (SRF))
Authors:Pellegrini, L, Tan, S, Richmond, T.J.
Deposit date:1995-07-28
Release date:1995-07-28
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structure of serum response factor core bound to DNA.
Nature, 376, 1995
2NZD
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BU of 2nzd by Molmil
Nucleosome core particle containing 145 bp of DNA
Descriptor: DNA (145-MER), Histone H2B, Histone H3, ...
Authors:Ong, M.S, Richmond, T.J, Davey, C.A.
Deposit date:2006-11-23
Release date:2007-04-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:DNA stretching and extreme kinking in the nucleosome core
J.Mol.Biol., 368, 2007
1ZBB
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BU of 1zbb by Molmil
Structure of the 4_601_167 Tetranucleosome
Descriptor: DNA STRAND 1 (ARBITRARY MODEL SEQUENCE), DNA STRAND 2 (ARBITRARY MODEL SEQUENCE), HISTONE H3, ...
Authors:Schalch, T, Duda, S, Sargent, D.F, Richmond, T.J.
Deposit date:2005-04-08
Release date:2005-07-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (9 Å)
Cite:X-ray structure of a tetranucleosome and its implications for the chromatin fibre.
Nature, 436, 2005
1YTF
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BU of 1ytf by Molmil
YEAST TFIIA/TBP/DNA COMPLEX
Descriptor: DNA (5'-D(*GP*TP*TP*TP*TP*AP*TP*AP*TP*AP*CP*AP*TP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*AP*TP*GP*TP*AP*TP*AP*TP*AP*AP*AP*AP*C)-3'), PROTEIN (TATA BINDING PROTEIN (TBP)), ...
Authors:Tan, S, Hunziker, Y, Sargent, D.F, Richmond, T.J.
Deposit date:1996-04-05
Release date:1996-06-20
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of a yeast TFIIA/TBP/DNA complex.
Nature, 381, 1996
1F3U
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BU of 1f3u by Molmil
CRYSTAL STRUCTURE OF THE RAP30/74 INTERACTION DOMAINS OF HUMAN TFIIF
Descriptor: TRANSCRIPTION INITIATION FACTOR IIF, ALPHA SUBUNIT, BETA SUBUNIT
Authors:Gaiser, F, Tan, S, Richmond, T.J.
Deposit date:2000-06-06
Release date:2000-10-11
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Novel dimerization fold of RAP30/RAP74 in human TFIIF at 1.7 A resolution.
J.Mol.Biol., 302, 2000
1EGW
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BU of 1egw by Molmil
CRYSTAL STRUCTURE OF MEF2A CORE BOUND TO DNA
Descriptor: DNA (5'-D(*AP*AP*AP*GP*CP*TP*AP*TP*TP*AP*TP*TP*AP*GP*CP*TP*T)-3'), DNA (5'-D(*TP*AP*AP*GP*CP*TP*AP*AP*TP*AP*AP*TP*AP*GP*CP*TP*T)-3'), MADS BOX TRANSCRIPTION ENHANCER FACTOR 2, ...
Authors:Santelli, E, Richmond, T.J.
Deposit date:2000-02-17
Release date:2000-03-20
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of MEF2A core bound to DNA at 1.5 A resolution.
J.Mol.Biol., 297, 2000
1DGC
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BU of 1dgc by Molmil
THE X-RAY STRUCTURE OF THE GCN4-BZIP BOUND TO ATF/CREB SITE DNA SHOWS THE COMPLEX DEPENDS ON DNA FLEXIBILITY
Descriptor: DNA (5'-D(*TP*GP*GP*AP*GP*AP*TP*GP*AP*CP*GP*TP*CP*AP*TP*CP*T P*CP*C)-3'), PROTEIN (GCN4)
Authors:Koenig, P, Richmond, T.J.
Deposit date:1993-07-15
Release date:1994-06-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3 Å)
Cite:The X-ray structure of the GCN4-bZIP bound to ATF/CREB site DNA shows the complex depends on DNA flexibility.
J.Mol.Biol., 233, 1993
1NVP
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BU of 1nvp by Molmil
HUMAN TFIIA/TBP/DNA COMPLEX
Descriptor: 5'-D(*CP*CP*TP*TP*TP*TP*AP*TP*AP*GP*CP*CP*CP*CP*CP*CP*C)-3', 5'-D(*GP*GP*GP*GP*GP*GP*GP*CP*TP*AP*TP*AP*AP*AP*AP*GP*G)-3', TATA box binding protein, ...
Authors:Bleichenbacher, M, Tan, S, Richmond, T.J.
Deposit date:2003-02-04
Release date:2003-10-21
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Novel interactions between the components of human and yeast TFIIA/TBP/DNA complexes.
J.Mol.Biol., 332, 2003

 

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