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PDB: 21 件

2FE8
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SARS coronavirus papain-like protease: structure of a viral deubiquitinating enzyme
分子名称: BROMIDE ION, Replicase polyprotein 1ab, SULFATE ION, ...
著者Ratia, K, Santarsiero, B.D, Mesecar, A.D.
登録日2005-12-15
公開日2006-03-21
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Severe acute respiratory syndrome coronavirus papain-like protease: Structure of a viral deubiquitinating enzyme
Proc.Natl.Acad.Sci.Usa, 103, 2006
8DSM
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BU of 8dsm by Molmil
Human NAMPT in complex with inhibitor ZN-4-3
分子名称: (3S)-N-[(1-benzothiophen-5-yl)methyl]-1-[6-(4-{2-[(2E)-3-(pyridin-3-yl)prop-2-enamido]ethyl}phenyl)thieno[2,3-d]pyrimidin-4-yl]piperidine-3-carboxamide, CHLORIDE ION, GLYCEROL, ...
著者Ratia, K, Xiong, R, Shen, Z, Thatcher, G.R.
登録日2022-07-22
公開日2023-08-02
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献A structural mechanism for positive allosteric modulation of nicotinamide phosphoribosyltransferase to elevate cellular NAD+
To Be Published
8F7L
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Human NAMPT in complex with substrate NAM and small molecule activator ZN-29-S
分子名称: (3S)-N-[(1-benzothiophen-5-yl)methyl]-1-[(2P)-2-(3-fluoro-4-methylphenyl)-2H-pyrazolo[3,4-d]pyrimidin-4-yl]piperidine-3-carboxamide, CHLORIDE ION, NICOTINAMIDE, ...
著者Ratia, K, Xiong, R, Shen, Z, Thatcher, G.R.
登録日2022-11-18
公開日2023-11-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Human NAMPT in complex with substrate NAM and small molecule activator ZN-29-S
To Be Published
8DSD
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BU of 8dsd by Molmil
Human NAMPT in complex with substrate NAM and small molecule activator NP-A1-S
分子名称: (3S)-1-[2-(4-methylphenyl)-2H-pyrazolo[3,4-d]pyrimidin-4-yl]-N-{[4-(methylsulfanyl)phenyl]methyl}piperidine-3-carboxamide, CHLORIDE ION, GLYCEROL, ...
著者Ratia, K, Xiong, R, Shen, Z, Thatcher, G.R.
登録日2022-07-22
公開日2023-03-08
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.429 Å)
主引用文献Mechanism of Allosteric Modulation of Nicotinamide Phosphoribosyltransferase to Elevate Cellular NAD.
Biochemistry, 62, 2023
8DSH
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BU of 8dsh by Molmil
Human NAMPT in complex with quercitrin and AMPcP
分子名称: 2-(3,4-dihydroxyphenyl)-5,7-dihydroxy-4-oxo-4H-chromen-3-yl 6-deoxy-alpha-L-mannopyranoside, Nicotinamide phosphoribosyltransferase, PHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER
著者Ratia, K, Xiong, R, Shen, Z, Thatcher, G.R.
登録日2022-07-22
公開日2023-03-08
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Mechanism of Allosteric Modulation of Nicotinamide Phosphoribosyltransferase to Elevate Cellular NAD.
Biochemistry, 62, 2023
8DTJ
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BU of 8dtj by Molmil
Human NAMPT in complex with small molecule activator ZN-43-S
分子名称: (3S)-N-[(1-benzothiophen-5-yl)methyl]-1-{2-[4-(trifluoromethyl)phenyl]-2H-pyrazolo[3,4-d]pyrimidin-4-yl}piperidine-3-carboxamide, CHLORIDE ION, GLYCEROL, ...
著者Ratia, K, Xiong, R, Shen, Z, Thatcher, G.R.
登録日2022-07-25
公開日2023-03-08
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.118 Å)
主引用文献Mechanism of Allosteric Modulation of Nicotinamide Phosphoribosyltransferase to Elevate Cellular NAD.
Biochemistry, 62, 2023
8DSC
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Human NAMPT in complex with substrate NAM and small molecule activator NP-A1-R
分子名称: (3R)-1-[2-(4-methylphenyl)-2H-pyrazolo[3,4-d]pyrimidin-4-yl]-N-{[4-(methylsulfanyl)phenyl]methyl}piperidine-3-carboxamide, CHLORIDE ION, GLYCEROL, ...
著者Ratia, K, Xiong, R, Shen, Z, Thatcher, G.R.
登録日2022-07-22
公開日2023-03-08
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.321 Å)
主引用文献Mechanism of Allosteric Modulation of Nicotinamide Phosphoribosyltransferase to Elevate Cellular NAD.
Biochemistry, 62, 2023
8DSI
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BU of 8dsi by Molmil
Human NAMPT in complex with substrate NAM
分子名称: CHLORIDE ION, GLYCEROL, NICOTINAMIDE, ...
著者Ratia, K, Xiong, R, Shen, Z, Thatcher, G.R.
登録日2022-07-22
公開日2023-03-08
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.43 Å)
主引用文献Mechanism of Allosteric Modulation of Nicotinamide Phosphoribosyltransferase to Elevate Cellular NAD.
Biochemistry, 62, 2023
8DSE
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Human NAMPT in complex with substrate NAM and activator quercitrin
分子名称: 2-(3,4-dihydroxyphenyl)-5,7-dihydroxy-4-oxo-4H-chromen-3-yl 6-deoxy-alpha-L-mannopyranoside, CHLORIDE ION, NICOTINAMIDE, ...
著者Ratia, K, Xiong, R, Shen, Z, Thatcher, G.R.
登録日2022-07-22
公開日2023-03-08
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.428 Å)
主引用文献Mechanism of Allosteric Modulation of Nicotinamide Phosphoribosyltransferase to Elevate Cellular NAD.
Biochemistry, 62, 2023
2ALV
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BU of 2alv by Molmil
X-ray structural analysis of SARS coronavirus 3CL proteinase in complex with designed anti-viral inhibitors
分子名称: N-((3S,6R)-6-((S,E)-4-ETHOXYCARBONYL-1-((S)-2-OXOPYRROLIDIN-3-YL)BUT-3-EN-2-YLCARBAMOYL)-2,9-DIMETHYL-4-OXODEC-8-EN-3-YL)-5-METHYLISOXAZOLE-3-CARBOXAMIDE, Replicase polyprotein 1ab
著者Ghosh, A.K, Xi, K, Ratia, K, Santarsiero, B.D, Fu, W, Harcourt, B.H, Rota, P.A, Baker, S.C, Johnson, M.E, Mesecar, A.D.
登録日2005-08-08
公開日2006-08-08
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Design and synthesis of peptidomimetic severe acute respiratory syndrome chymotrypsin-like protease inhibitors.
J.Med.Chem., 48, 2005
4MM3
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BU of 4mm3 by Molmil
Crystal structure of SARS-CoV papain-like protease PLpro in complex with ubiquitin aldehyde
分子名称: Papain-like proteinase, Ubiquitin, ZINC ION
著者Mesecar, A.D, Ratia, K.
登録日2013-09-08
公開日2014-07-02
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (2.752 Å)
主引用文献Structural Basis for the Ubiquitin-Linkage Specificity and deISGylating activity of SARS-CoV papain-like protease.
Plos Pathog., 10, 2014
2ZC1
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BU of 2zc1 by Molmil
Organophosphorus Hydrolase from Deinococcus radiodurans
分子名称: BROMIDE ION, COBALT (II) ION, Phosphotriesterase
著者Larsen, S.D, Hawwa, R, Ratia, K, Santarsiero, B.D, Mesecar, A.D.
登録日2007-11-02
公開日2008-11-25
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献X-Ray Structural Insights into a Phosphotriesterase
to be published
3E9S
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BU of 3e9s by Molmil
A new class of papain-like protease/deubiquitinase inhibitors blocks SARS virus replication
分子名称: 5-amino-2-methyl-N-[(1R)-1-naphthalen-1-ylethyl]benzamide, CHLORIDE ION, Non-structural protein 3, ...
著者Mesecar, A.D, Ratia, K, Pegan, S.
登録日2008-08-23
公開日2008-10-07
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A new class of papain-like protease/deubiquitinase inhibitors blocks SARS virus replication
To be published
3GTF
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BU of 3gtf by Molmil
D71G/E101G/V235L mutant in organophosphorus hydrolase from Deinococcus radiodurans
分子名称: COBALT (II) ION, Organophosphorus hydrolase
著者Hawwa, R, Larsen, S, Ratia, K, Mesecar, A.
登録日2009-03-27
公開日2009-06-30
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Structure-based and random mutagenesis approaches increase the organophosphate-degrading activity of a phosphotriesterase homologue from Deinococcus radiodurans.
J.Mol.Biol., 393, 2009
3GU1
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BU of 3gu1 by Molmil
Y97W mutant in organophosphorus hydrolase from Deinococcus radiodurans
分子名称: COBALT (II) ION, GLYCEROL, Organophosphorus hydrolase
著者Hawwa, R, Larsen, S, Ratia, K, Mesecar, A.
登録日2009-03-28
公開日2009-06-30
最終更新日2021-10-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure-based and random mutagenesis approaches increase the organophosphate-degrading activity of a phosphotriesterase homologue from Deinococcus radiodurans.
J.Mol.Biol., 393, 2009
3GTH
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BU of 3gth by Molmil
D71G/E101G/M234I mutant in organophosphorus hydrolase from Deinococcus radiodurans
分子名称: COBALT (II) ION, FORMIC ACID, Organophosphorus hydrolase
著者Hawwa, R, Larsen, S, Ratia, K, Mesecar, A.
登録日2009-03-27
公開日2009-06-30
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Structure-based and random mutagenesis approaches increase the organophosphate-degrading activity of a phosphotriesterase homologue from Deinococcus radiodurans.
J.Mol.Biol., 393, 2009
3GU2
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BU of 3gu2 by Molmil
Y97L/G100-/E101- mutant in organophosphorus hydrolase
分子名称: COBALT (II) ION, Organophosphorus hydrolase
著者Hawwa, R, Larsen, S, Ratia, K, Mesecar, A.
登録日2009-03-28
公開日2009-06-30
最終更新日2021-10-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure-based and random mutagenesis approaches increase the organophosphate-degrading activity of a phosphotriesterase homologue from Deinococcus radiodurans.
J.Mol.Biol., 393, 2009
3GU9
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BU of 3gu9 by Molmil
R228A mutation in organophosphorus hydrolase from Deinococcus radiodurans
分子名称: COBALT (II) ION, Organophosphorus hydrolase
著者Hawwa, R, Larsen, S, Ratia, K, Mesecar, A.
登録日2009-03-28
公開日2009-06-30
最終更新日2021-10-13
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献Structure-based and random mutagenesis approaches increase the organophosphate-degrading activity of a phosphotriesterase homologue from Deinococcus radiodurans.
J.Mol.Biol., 393, 2009
3HTW
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BU of 3htw by Molmil
Organophosphorus hydrolase from Deinococcus radiodurans with cacodylate bound
分子名称: CACODYLATE ION, COBALT (II) ION, MAGNESIUM ION, ...
著者Hawwa, R, Larsen, S, Ratia, K, Mesecar, A.
登録日2009-06-12
公開日2009-06-30
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure-based and random mutagenesis approaches increase the organophosphate-degrading activity of a phosphotriesterase homologue from Deinococcus radiodurans.
J.Mol.Biol., 393, 2009
3GTI
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BU of 3gti by Molmil
D71G/E101G/M234L mutant in organophosphorus hydrolase from Deinococcus radiodurans
分子名称: COBALT (II) ION, Organophosphorus hydrolase, SODIUM ION
著者Hawwa, R, Larsen, S, Ratia, K, Mesecar, A.
登録日2009-03-27
公開日2009-06-30
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (2.42 Å)
主引用文献Structure-based and random mutagenesis approaches increase the organophosphate-degrading activity of a phosphotriesterase homologue from Deinococcus radiodurans.
J.Mol.Biol., 393, 2009
3GTX
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BU of 3gtx by Molmil
D71G/E101G mutant in organophosphorus hydrolase from Deinococcus radiodurans
分子名称: COBALT (II) ION, Organophosphorus hydrolase
著者Hawwa, R, Larsen, S, Ratia, K, Mesecar, A.
登録日2009-03-28
公開日2009-06-30
最終更新日2021-10-13
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献Structure-based and random mutagenesis approaches increase the organophosphate-degrading activity of a phosphotriesterase homologue from Deinococcus radiodurans.
J.Mol.Biol., 393, 2009

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