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PDB: 372 results

3GVX
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Crystal structure of Glycerate dehydrogenase related protein from Thermoplasma acidophilum
Descriptor: Glycerate dehydrogenase related protein, POTASSIUM ION
Authors:Syed Ibrahim, B, Kumaran, D, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-03-31
Release date:2009-04-28
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of Glycerate dehydrogenase related protein from Thermoplasma acidophilum
To be Published
3H74
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BU of 3h74 by Molmil
Crystal structure of pyridoxal kinase from Lactobacillus plantarum
Descriptor: GLYCEROL, Pyridoxal kinase, SULFATE ION
Authors:Bagaria, A, Kumaran, D, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-04-24
Release date:2009-05-26
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal structure of pyridoxal kinase from Lactobacillus plantarum
To be Published
2LVH
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BU of 2lvh by Molmil
Solution structure of the zinc finger AFV1p06 protein from the hyperthermophilic archaeal virus AFV1
Descriptor: Putative zinc finger protein ORF59a, ZINC ION
Authors:Guilliere, F, Sezonov, G, Prangishvili, D, Delepierre, M, Guijarro, J.
Deposit date:2012-07-05
Release date:2013-01-30
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structure of an archaeal DNA binding protein with an eukaryotic zinc finger fold.
Plos One, 8, 2013
2J9N
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Robotically harvested Trypsin complexed with Benzamidine containing polypeptide mediated crystal contacts
Descriptor: BENZAMIDINE, CALCIUM ION, CATIONIC TRYPSIN, ...
Authors:Viola, R, Carman, P, Walsh, J, Miller, E, Benning, M, Frankel, D, McPherson, A, Cudney, R, Rupp, B.
Deposit date:2006-11-14
Release date:2007-04-03
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Operator Assisted Harvesting of Protein Crystals Using a Universal Micromanipulation Robot.
J.Appl.Crystallogr., 40, 2007
3G7S
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BU of 3g7s by Molmil
Crystal structure of a long-chain-fatty-acid-CoA ligase (FadD1) from Archaeoglobus fulgidus
Descriptor: Long-chain-fatty-acid--CoA ligase (FadD-1)
Authors:Palani, K, Kumaran, D, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-02-10
Release date:2009-03-03
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure of a long-chain-fatty-acid-CoA ligase (FadD1) from Archaeoglobus fulgidus
To be Published
8BF9
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Molecular view of ER membrane remodeling by the Sec61/TRAP translocon.
Descriptor: 60S ribosomal protein L39, Large ribosomal subunit protein eL31, Large ribosomal subunit protein eL38, ...
Authors:Karki, S, Javanainen, M, Tranter, D, Rehan, S, Huiskonen, J, Happonen, L, Paavilainen, V.
Deposit date:2022-10-24
Release date:2023-11-01
Last modified:2023-12-20
Method:ELECTRON MICROSCOPY (2.69 Å)
Cite:Molecular view of ER membrane remodeling by the Sec61/TRAP translocon.
Embo Rep., 24, 2023
7UCJ
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BU of 7ucj by Molmil
Mammalian 80S translation initiation complex with mRNA and Harringtonine
Descriptor: 18S rRNA, 28s rRNA, 40S ribosomal protein S10, ...
Authors:Yang, R, Arango, D, Sturgill, D, Oberdoerffer, S.
Deposit date:2022-03-16
Release date:2022-06-01
Last modified:2022-08-17
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Direct epitranscriptomic regulation of mammalian translation initiation through N4-acetylcytidine.
Mol.Cell, 82, 2022
7UCK
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80S translation initiation complex with ac4c(-1) mRNA and Harringtonine
Descriptor: 18S rRNA, 28s rRNA, 40S ribosomal protein S10, ...
Authors:Yang, R, Arango, D, Sturgill, D, Oberdoerffer, S.
Deposit date:2022-03-16
Release date:2022-06-01
Last modified:2022-08-17
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Direct epitranscriptomic regulation of mammalian translation initiation through N4-acetylcytidine.
Mol.Cell, 82, 2022
3GBV
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Crystal structure of a putative LacI transcriptional regulator from Bacteroides fragilis
Descriptor: 1,2-ETHANEDIOL, Putative LacI-family transcriptional regulator, SODIUM ION
Authors:Syed Ibrahim, B, Kumaran, D, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-02-20
Release date:2009-03-10
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of a putative LacI transcriptional regulator from Bacteroides fragilis
To be Published
6AQJ
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BU of 6aqj by Molmil
Crystal structures of Staphylococcus aureus ketol-acid reductoisomerase in complex with two transition state analogs that have biocidal activity.
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, Ketol-acid reductoisomerase (NADP(+)), ...
Authors:Patel, K.M, Teran, D, Zheng, S, Gracia, M, Lv, Y, Schembri, M.A, McGeary, R.P, Schenk, G, Guddat, L.W.
Deposit date:2017-08-20
Release date:2017-10-18
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.373 Å)
Cite:Crystal Structures of Staphylococcus aureus Ketol-Acid Reductoisomerase in Complex with Two Transition State Analogues that Have Biocidal Activity.
Chemistry, 23, 2017
3IBQ
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BU of 3ibq by Molmil
Crystal structure of pyridoxal kinase from Lactobacillus plantarum in complex with ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Pyridoxal kinase
Authors:Bagaria, A, Kumaran, D, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-07-16
Release date:2009-07-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of pyridoxal kinase from Lactobacillus plantarum in complex with ATP
To be Published
2MC1
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Solution structure of the Vav1 SH2 domain complexed with a Syk-derived singly phosphorylated peptide
Descriptor: Proto-oncogene vav, Tyrosine-protein kinase SYK
Authors:Chen, C, Piraner, D, Gorenstein, N.M, Geahlen, R.L, Post, C.B.
Deposit date:2013-08-13
Release date:2013-08-28
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Differential recognition of syk-binding sites by each of the two phosphotyrosine-binding pockets of the Vav SH2 domain.
Biopolymers, 99, 2013
6BJR
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BU of 6bjr by Molmil
Crystal structure of prothrombin mutant S101C/A470C
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, MAGNESIUM ION, Prothrombin, ...
Authors:Chinnaraj, M, Chen, Z, Pelc, L, Grese, Z, Bystranowska, D, Di Cera, E, Pozzi, N.
Deposit date:2017-11-06
Release date:2018-06-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (6 Å)
Cite:Structure of prothrombin in the closed form reveals new details on the mechanism of activation.
Sci Rep, 8, 2018
2JV8
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Solution structure of protein NE1242 from Nitrosomonas europaea. Northeast Structural Genomics Consortium Target NeT4
Descriptor: Uncharacterized protein NE1242
Authors:Wu, Y, Yee, A, Zeri, A.C, Guido, V, Sukumaran, D, Arrowsmith, C.H, Szyperski, T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2007-09-12
Release date:2007-12-25
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution NMR structure of protein NE1242 from Nitrosomonas europaea.
To be Published
2JZ6
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BU of 2jz6 by Molmil
Solution structure of 50S ribosomal protein L28 from Thermotoga maritima. Northeast Structural Genomics Consortium target VR97
Descriptor: 50S ribosomal protein L28
Authors:Wu, Y, Singarapu, K.K, Guido, V, Yee, A, Sukumaran, D, Arrowsmith, C.H, Szyperski, T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2007-12-28
Release date:2008-01-29
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Solution structure of 50S ribosomal protein L28 from Thermotoga maritima. Northeast Structural Genomics Consortium target VR97.
To be Published
3II2
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BU of 3ii2 by Molmil
Structure of ORF157 from Acidianus Filamentous Virus 1
Descriptor: CHLORIDE ION, GLYCEROL, MERCURY (II) ION, ...
Authors:Goulet, A, Porciero, S, Prangishvili, D, van Tilbeurgh, H, Cambillau, C, Campanacci, V.
Deposit date:2009-07-31
Release date:2010-03-23
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:ORF157 from the archaeal virus Acidianus filamentous virus 1 defines a new class of nuclease
J.Virol., 84, 2010
3II3
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BU of 3ii3 by Molmil
Structure of ORF157 from Acidianus filamentous Virus 1
Descriptor: GLYCEROL, NICKEL (II) ION, Putative uncharacterized protein
Authors:Goulet, A, Redder, P, Pina, M, Prangishvili, D, van Tilbeurgh, H, Cambillau, C, Campanacci, V.
Deposit date:2009-07-31
Release date:2010-03-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:ORF157 from the archaeal virus Acidianus filamentous virus 1 defines a new class of nuclease
J.Virol., 84, 2010
3GPV
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BU of 3gpv by Molmil
Crystal structure of a transcriptional regulator, MerR family from Bacillus thuringiensis
Descriptor: Transcriptional regulator, MerR family
Authors:Palani, K, Kumaran, D, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-03-23
Release date:2009-04-14
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of a transcriptional regulator, MerR family from Bacillus thuringiensis
To be Published
2GU1
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BU of 2gu1 by Molmil
Crystal structure of a zinc containing peptidase from vibrio cholerae
Descriptor: SODIUM ION, ZINC ION, Zinc peptidase
Authors:Sugadev, R, Kumaran, D, Swaminathan, S, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2006-04-28
Release date:2006-07-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of a putative lysostaphin peptidase from Vibrio cholerae.
Proteins, 72, 2008
2SPC
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BU of 2spc by Molmil
CRYSTAL STRUCTURE OF THE REPETITIVE SEGMENTS OF SPECTRIN
Descriptor: SPECTRIN
Authors:Yan, Y, Winograd, E, Viel, A, Cronin, T, Harrison, S.C, Branton, D.
Deposit date:1994-03-01
Release date:1994-05-31
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of the repetitive segments of spectrin.
Science, 262, 1993
4LQ9
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BU of 4lq9 by Molmil
Crystal structure of human norovirus RNA-dependent RNA-polymerase in complex with NAF2
Descriptor: MAGNESIUM ION, RNA-dependent RNA-polymerase, naphthalene-1,5-disulfonic acid
Authors:Milani, M, Tarantino, D, Mastrangelo, E, Croci, R.
Deposit date:2013-07-17
Release date:2014-02-12
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Naphthalene-sulfonate inhibitors of human norovirus RNA-dependent RNA-polymerase.
Antiviral Res., 102, 2014
2GOK
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Crystal structure of the imidazolonepropionase from Agrobacterium tumefaciens at 1.87 A resolution
Descriptor: CHLORIDE ION, FE (III) ION, GLYCEROL, ...
Authors:Tyagi, R, Kumaran, D, Swaminathan, S, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2006-04-13
Release date:2006-04-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:X-ray structure of imidazolonepropionase from Agrobacterium tumefaciens at 1.87 A resolution.
Proteins, 69, 2007
6TAZ
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BU of 6taz by Molmil
Timeless couples G quadruplex detection with processing by DDX11 during DNA replication
Descriptor: Protein timeless homolog
Authors:Lerner Koch, L, Holzer, S, Kilkenny, M.L, Murat, P, Svikovic, S, Schiavone, D, Bittleston, A, Maman, J.D, Branzei, D, Stott, K, Pellegrini, L, Sale, E.J.
Deposit date:2019-10-31
Release date:2020-07-01
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Timeless couples G-quadruplex detection with processing by DDX11 helicase during DNA replication.
Embo J., 39, 2020
3GRA
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BU of 3gra by Molmil
Crystal structure of AraC family transcriptional regulator from Pseudomonas putida
Descriptor: 1,2-ETHANEDIOL, MAGNESIUM ION, SULFATE ION, ...
Authors:Bagaria, A, Kumaran, D, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-03-25
Release date:2009-04-14
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of AraC family transcriptional regulator from Pseudomonas putida
To be Published
3HYO
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Crystal structure of pyridoxal kinase from Lactobacillus plantarum in complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Pyridoxal kinase
Authors:Bagaria, A, Kumaran, D, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-06-22
Release date:2009-06-30
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of pyridoxal kinase from Lactobacillus plantarum in complex with ADP
To be Published

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