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PDB: 2930 results

8SJC
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BU of 8sjc by Molmil
Crystal structure of Zn2+ bound calprotectin
Descriptor: CALCIUM ION, MAGNESIUM ION, PENTAETHYLENE GLYCOL, ...
Authors:Perera, Y.R, Garcia, V, Guillen, R.M, Chazin, W.J.
Deposit date:2023-04-17
Release date:2024-07-03
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Crystal structure of Zn2+ bound calprotectin
To Be Published
1KAM
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BU of 1kam by Molmil
Structure of Bacillus subtilis Nicotinic Acid Mononucleotide Adenylyl Transferase
Descriptor: NICOTINATE-NUCLEOTIDE ADENYLYLTRANSFERASE
Authors:Olland, A.M, Underwood, K.W, Czerwinski, R.M, Lo, M.C, Aulabaugh, A, Bard, J, Stahl, M.L, Somers, W.S, Sullivan, F.X, Chopra, R.
Deposit date:2001-11-02
Release date:2002-07-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Identification, characterization, and crystal structure of Bacillus subtilis nicotinic acid mononucleotide adenylyltransferase.
J.Biol.Chem., 277, 2002
5U3V
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BU of 5u3v by Molmil
Human PPARdelta ligand-binding domain in complexed with specific agonist 6
Descriptor: 6-[2-({cyclopentyl[4-(furan-3-yl)benzene-1-carbonyl]amino}methyl)phenoxy]hexanoic acid, DI(HYDROXYETHYL)ETHER, Peroxisome proliferator-activated receptor delta, ...
Authors:Wu, C.-C, Baiga, T.J, Downes, M, La Clair, J.J, Atkins, A.R, Richard, S.B, Stockley-Noel, T.A, Bowman, M.E, Evans, R.M, Noel, J.P.
Deposit date:2016-12-03
Release date:2017-03-22
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Structural basis for specific ligation of the peroxisome proliferator-activated receptor delta.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
1U77
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BU of 1u77 by Molmil
Crystal Structure of Ammonia Channel AmtB from E. Coli
Descriptor: Probable ammonium transporter
Authors:Khademi, S, O'Connell III, J, Remis, J, Robles-Colmenares, Y, Miercke, L.J.W, Stroud, R.M.
Deposit date:2004-08-02
Release date:2004-09-21
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Mechanism of ammonia transport by Amt/MEP/Rh: structure of AmtB at 1.35 A
Science, 305, 2004
1U0Z
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BU of 1u0z by Molmil
N-Domain Of Grp94 Lacking The Charged Domain In Complex With Radicicol
Descriptor: Endoplasmin, PENTAETHYLENE GLYCOL, RADICICOL, ...
Authors:Gewirth, D.T, Immormino, R.M.
Deposit date:2004-07-14
Release date:2005-07-05
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:N-Domain Of Grp94 Lacking The Charged Domain In Complex With Radicicol
TO BE PUBLISHED
1HRJ
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BU of 1hrj by Molmil
HUMAN RANTES, NMR, 13 STRUCTURES
Descriptor: HUMAN REGULATED UPON ACTIVATION NORMAL T-CELL EXPRESSED AND SECRETED
Authors:Chung, C, Cooke, R.M, Proudfoot, A.E.I, Wells, T.N.C.
Deposit date:1995-08-18
Release date:1996-10-14
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:The three-dimensional solution structure of RANTES.
Biochemistry, 34, 1995
5U3X
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BU of 5u3x by Molmil
Human PPARdelta ligand-binding domain in complexed with specific agonist 8
Descriptor: 6-[2-({cyclopropyl[4-(pyridin-3-yl)benzene-1-carbonyl]amino}methyl)phenoxy]hexanoic acid, DI(HYDROXYETHYL)ETHER, Peroxisome proliferator-activated receptor delta, ...
Authors:Wu, C.-C, Baiga, T.J, Downes, M, La Clair, J.J, Atkins, A.R, Richard, S.B, Stockley-Noel, T.A, Bowman, M.E, Evans, R.M, Noel, J.P.
Deposit date:2016-12-03
Release date:2017-03-22
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for specific ligation of the peroxisome proliferator-activated receptor delta.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
1U7G
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BU of 1u7g by Molmil
Crystal Structure of Ammonia Channel AmtB from E. Coli
Descriptor: AMMONIA, AMMONIUM ION, Probable ammonium transporter, ...
Authors:Khademi, S, O'Connell III, J, Remis, J, Robles-Colmenares, Y, Miercke, L.J.W, Stroud, R.M.
Deposit date:2004-08-03
Release date:2004-09-21
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Mechanism of ammonia transport by Amt/MEP/Rh: structure of AmtB at 1.35 A
Science, 305, 2004
8T0M
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BU of 8t0m by Molmil
Proteasome 20S core particle from Pre1-1 Pre4-1 Double mutant
Descriptor: Proteasome subunit alpha type-1, Proteasome subunit alpha type-2, Proteasome subunit alpha type-3, ...
Authors:Walsh Jr, R.M, Rawson, S, Schnell, H, Velez, B, Hanna, J.
Deposit date:2023-06-01
Release date:2023-09-06
Last modified:2023-10-25
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:Structure of the preholoproteasome reveals late steps in proteasome core particle biogenesis.
Nat.Struct.Mol.Biol., 30, 2023
8T08
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BU of 8t08 by Molmil
Preholo-Proteasome from Pre1-1 Pre4-1 Double Mutant
Descriptor: Proteasome assembly chaperone 2, Proteasome chaperone 1, Proteasome maturation factor UMP1, ...
Authors:Walsh Jr, R.M, Rawson, S, Schnell, H, Velez, B, Hanna, J.
Deposit date:2023-05-31
Release date:2023-09-06
Last modified:2023-10-25
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structure of the preholoproteasome reveals late steps in proteasome core particle biogenesis.
Nat.Struct.Mol.Biol., 30, 2023
1S8J
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BU of 1s8j by Molmil
Nitrate-bound D85S mutant of bacteriorhodopsin
Descriptor: 1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL, Bacteriorhodopsin precursor, NITRATE ION, ...
Authors:Facciotti, M.T, Cheung, V.S, Lunde, C.S, Rouhani, S, Baliga, N.S, Glaeser, R.M.
Deposit date:2004-02-02
Release date:2004-06-08
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Specificity of anion binding in the substrate pocket of bacteriorhodopsin.
Biochemistry, 43, 2004
1KGB
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structure of ground-state bacteriorhodopsin
Descriptor: 1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL, RETINAL, bacteriorhodopsin
Authors:Facciotti, M.T, Rouhani, S, Burkard, F.T, Betancourt, F.M, Downing, K.H, Rose, R.B, McDermott, G, Glaeser, R.M.
Deposit date:2001-11-26
Release date:2001-12-05
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structure of an early intermediate in the M-state phase of the bacteriorhodopsin photocycle.
Biophys.J., 81, 2001
1JG0
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BU of 1jg0 by Molmil
Crystal structure of Escherichia coli thymidylate synthase complexed with 2'-deoxyuridine-5'-monophosphate and N,O-didansyl-L-tyrosine
Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, N,O-DIDANSYL-L-TYROSINE, thymidylate synthase
Authors:Fritz, T.A, Tondi, D, Finer-Moore, J.S, Costi, M.P, Stroud, R.M.
Deposit date:2001-06-22
Release date:2002-02-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Predicting and harnessing protein flexibility in the design of species-specific inhibitors of thymidylate synthase.
Chem.Biol., 8, 2001
1JMK
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BU of 1jmk by Molmil
Structural Basis for the Cyclization of the Lipopeptide Antibiotic Surfactin by the Thioesterase Domain SrfTE
Descriptor: SULFATE ION, Surfactin Synthetase
Authors:Bruner, S.D, Weber, T, Kohli, R.M, Schwarzer, D, Marahiel, M.A, Walsh, C.T, Stubbs, M.T.
Deposit date:2001-07-18
Release date:2002-03-27
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Structural basis for the cyclization of the lipopeptide antibiotic surfactin by the thioesterase domain SrfTE.
Structure, 10, 2002
1S4D
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BU of 1s4d by Molmil
Crystal Structure Analysis of the S-adenosyl-L-methionine dependent uroporphyrinogen-III C-methyltransferase SUMT
Descriptor: GLYCEROL, S-ADENOSYL-L-HOMOCYSTEINE, Uroporphyrin-III C-methyltransferase
Authors:Vevodova, J, Graham, R.M, Raux, E, Schubert, H.L, Roper, D.I, Brindley, A.A, Scott, A.I, Roessner, C.A, Stamford, N.P.J, Stroupe, M.E, Getzoff, E.D, Warren, M.J, Wilson, K.S.
Deposit date:2004-01-16
Release date:2004-11-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure/Function Studies on a S-Adenosyl-l-methionine-dependent Uroporphyrinogen III C Methyltransferase (SUMT), a Key Regulatory Enzyme of Tetrapyrrole Biosynthesis
J.Mol.Biol., 344, 2004
1I2C
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BU of 1i2c by Molmil
CRYSTAL STRUCTURE OF MUTANT T145A SQD1 PROTEIN COMPLEX WITH NAD AND UDP-GLUCOSE
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SULFATE ION, SULFOLIPID BIOSYNTHESIS PROTEIN SQD1, ...
Authors:Theisen, M.J, Sanda, S.L, Ginell, S.L, Benning, C, Garavito, R.M.
Deposit date:2001-02-07
Release date:2003-07-01
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Characterization of the Active Site of UDP-sulfoquinovose Synthase: Formation of the Sulfonic Acid Product in the Crystalline State.
To be Published
5TC3
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BU of 5tc3 by Molmil
Structure of IMP dehydrogenase from Ashbya gossypii bound to ATP and GDP
Descriptor: ACETATE ION, ADENOSINE-5'-TRIPHOSPHATE, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Fernandez-Justel, D, de Pereda, J.M, Revuelta, J.L, Buey, R.M.
Deposit date:2016-09-14
Release date:2017-06-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.462 Å)
Cite:A nucleotide-controlled conformational switch modulates the activity of eukaryotic IMP dehydrogenases.
Sci Rep, 7, 2017
1I5P
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BU of 1i5p by Molmil
INSECTICIDAL CRYSTAL PROTEIN CRY2AA
Descriptor: PESTICIDIAL CRYSTAL PROTEIN CRY2AA
Authors:Morse, R.J, Stroud, R.M, Yamamoto, T.
Deposit date:2001-02-28
Release date:2001-05-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of Cry2Aa suggests an unexpected receptor binding epitope.
Structure, 9, 2001
8TGY
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BU of 8tgy by Molmil
Crystal structure of Gdx-Clo from Small Multidrug Resistance family of transporters in complex with guanylurea
Descriptor: DECYL-BETA-D-MALTOPYRANOSIDE, L10 Monobody, LAURYL DIMETHYLAMINE-N-OXIDE, ...
Authors:Lucero, R.M, Stockbridge, R.B.
Deposit date:2023-07-13
Release date:2023-08-02
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Transport of metformin metabolites by guanidinium exporters of the Small Multidrug Resistance family.
Biorxiv, 2023
5U3S
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BU of 5u3s by Molmil
Human PPARdelta ligand-binding domain in complexed with specific agonist 3
Descriptor: 6-[2-({[4-(furan-3-yl)benzene-1-carbonyl](propan-2-yl)amino}methyl)phenoxy]hexanoic acid, DI(HYDROXYETHYL)ETHER, POTASSIUM ION, ...
Authors:Wu, C.-C, Baiga, T.J, Downes, M, La Clair, J.J, Atkins, A.R, Richard, S.B, Stockley-Noel, T.A, Bowman, M.E, Evans, R.M, Noel, J.P.
Deposit date:2016-12-03
Release date:2017-03-22
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for specific ligation of the peroxisome proliferator-activated receptor delta.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5U46
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BU of 5u46 by Molmil
Human PPARdelta ligand-binding domain in complexed with GW501516
Descriptor: DI(HYDROXYETHYL)ETHER, Peroxisome proliferator-activated receptor delta, S-1,2-PROPANEDIOL, ...
Authors:Wu, C.-C, Baiga, T.J, Downes, M, La Clair, J.J, Atkins, A.R, Richard, S.B, Stockley-Noel, T.A, Bowman, M.E, Evans, R.M, Noel, J.P.
Deposit date:2016-12-03
Release date:2017-03-22
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for specific ligation of the peroxisome proliferator-activated receptor delta.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
1KXL
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BU of 1kxl by Molmil
Solution Structure of the Cdc13 DNA-binding Domain in a Complex with Single-Stranded Telomeric DNA (DNA structure not modeled)
Descriptor: CELL DIVISION CONTROL PROTEIN 13
Authors:Mitton-Fry, R.M, Anderson, E.M, Wuttke, D.S.
Deposit date:2002-01-31
Release date:2002-04-10
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Conserved structure for single-stranded telomeric DNA recognition.
Science, 296, 2002
1R3F
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BU of 1r3f by Molmil
Crystal Structure of tRNA Pseudouridine Synthase TruB and Its RNA Complex: RNA-protein Recognition Through a Combination of Rigid Docking and Induced Fit
Descriptor: tRNA pseudouridine synthase B
Authors:Pan, H, Agarwalla, S, Moustakas, D.T, Finer-Moore, J, Stroud, R.M.
Deposit date:2003-10-01
Release date:2003-11-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure of tRNA Pseudouridine Synthase TruB and Its RNA Complex: RNA Recognition Through a Combination of Rigid Docking and Induced Fit
Proc.Natl.Acad.Sci.USA, 100, 2003
8SX9
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BU of 8sx9 by Molmil
Inward-facing narrow conformation of bovine multidrug resistance protein 4 (MRP4) in MSP lipid nanodisc
Descriptor: Multidrug resistance-associated protein 4
Authors:Pourmal, S, Stroud, R.M.
Deposit date:2023-05-20
Release date:2024-01-17
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural basis of prostaglandin efflux by MRP4.
Nat.Struct.Mol.Biol., 31, 2024
5UKF
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Crystal Structure of the Human Vaccinia-related Kinase 1 Bound to an Oxindole Inhibitor
Descriptor: 4-{[(Z)-(7-oxo-6,7-dihydro-8H-[1,3]thiazolo[5,4-e]indol-8-ylidene)methyl]amino}benzene-1-sulfonamide, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Counago, R.M, Wells, C, Zuercher, W, Willson, T.M, Bountra, C, Edwards, A.M, Arruda, P, Gileadi, O, Structural Genomics Consortium (SGC)
Deposit date:2017-01-22
Release date:2017-03-29
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural characterization of human Vaccinia-Related Kinases (VRK) bound to small-molecule inhibitors identifies different P-loop conformations.
Sci Rep, 7, 2017

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