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PDB: 2921 件

1ZBX
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Crystal structure of a Orc1p-Sir1p complex
分子名称: Origin recognition complex subunit 1, Regulatory protein SIR1
著者Hsu, H.C, Stillman, B, Xu, R.M.
登録日2005-04-09
公開日2005-06-21
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural basis for origin recognition complex 1 protein-silence information regulator 1 protein interaction in epigenetic silencing
Proc.Natl.Acad.Sci.USA, 102, 2005
2G0B
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BU of 2g0b by Molmil
The structure of FeeM, an N-acyl amino acid synthase from uncultured soil microbes
分子名称: FeeM, N-DODECANOYL-L-TYROSINE
著者Van Wagoner, R.M, Clardy, J.
登録日2006-02-11
公開日2006-09-26
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献FeeM, an N-Acyl Amino Acid Synthase from an Uncultured Soil Microbe: Structure, Mechanism, and Acyl Carrier Protein Binding.
Structure, 14, 2006
7PMZ
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BU of 7pmz by Molmil
Crystal structure of Streptomyces coelicolor guaB (IMP dehydrogenase) bound to ATP and ppGpp at 2.0 A resolution
分子名称: ADENOSINE-5'-TRIPHOSPHATE, GUANOSINE-5',3'-TETRAPHOSPHATE, Inosine-5'-monophosphate dehydrogenase, ...
著者Fernandez-Justel, D, Revuelta, J.L, Buey, R.M.
登録日2021-09-04
公開日2022-05-11
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Diversity of mechanisms to control bacterial GTP homeostasis by the mutually exclusive binding of adenine and guanine nucleotides to IMP dehydrogenase.
Protein Sci., 31, 2022
2G8A
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Lactobacillus casei Y261M in complex with substrate, dUMP
分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, thymidylate synthase
著者Finer-Moore, J.S, Stroud, R.M.
登録日2006-03-02
公開日2006-03-14
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The role of protein dynamics in thymidylate synthase catalysis: variants of conserved 2'-deoxyuridine 5'-monophosphate (dUMP)-binding Tyr-261
Biochemistry, 45, 2006
4LGT
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BU of 4lgt by Molmil
Crystal structure of the catalytic domain of RluB in complex with a 21-nucleotide RNA substrate
分子名称: Ribosomal large subunit pseudouridine synthase B, stem-loop of 23S rRNA
著者Czudnochowski, N, Finer-Moore, J.S, Stroud, R.M.
登録日2013-06-28
公開日2013-11-20
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献The mechanism of pseudouridine synthases from a covalent complex with RNA, and alternate specificity for U2605 versus U2604 between close homologs.
Nucleic Acids Res., 42, 2014
2FVU
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BU of 2fvu by Molmil
Structure of the yeast Sir3 BAH domain
分子名称: Regulatory protein SIR3
著者Xu, R.M.
登録日2006-01-31
公開日2006-09-05
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure and function of the Saccharomyces cerevisiae Sir3 BAH domain.
Mol.Cell.Biol., 26, 2006
2FWY
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BU of 2fwy by Molmil
Structure of human Hsp90-alpha bound to the potent water soluble inhibitor PU-H64
分子名称: 8-(6-BROMO-BENZO[1,3]DIOXOL-5-YLSULFANYL)-9-(3-ISOPROPYLAMINO-PROPYL)-ADENINE, Heat shock protein HSP 90-alpha
著者Immormino, R.M, Gewirth, D.T.
登録日2006-02-03
公開日2006-10-03
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural and quantum chemical studies of 8-aryl-sulfanyl adenine class Hsp90 inhibitors.
J.Med.Chem., 49, 2006
2BE1
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Structure of the compact lumenal domain of yeast Ire1
分子名称: Serine/threonine-protein kinase/endoribonuclease IRE1, peptide
著者Credle, J.J, Finer-Moore, J.S, Papa, F.R, Stroud, R.M, Walter, P.
登録日2005-10-21
公開日2005-12-13
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.983 Å)
主引用文献Inaugural Article: On the mechanism of sensing unfolded protein in the endoplasmic reticulum
Proc.Natl.Acad.Sci.Usa, 102, 2005
2FXS
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Yeast HSP82 in complex with the novel HSP90 Inhibitor Radamide
分子名称: ATP-dependent molecular chaperone HSP82, GLYCEROL, METHYL 3-CHLORO-2-{3-[(2,5-DIHYDROXY-4-METHOXYPHENYL)AMINO]-3-OXOPROPYL}-4,6-DIHYDROXYBENZOATE
著者Immormino, R.M, Gewirth, D.T.
登録日2006-02-06
公開日2007-02-06
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Different poses for ligand and chaperone in inhibitor-bound Hsp90 and GRP94: implications for paralog-specific drug design.
J.Mol.Biol., 388, 2009
1NG1
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BU of 1ng1 by Molmil
N AND GTPASE DOMAINS OF THE SIGNAL SEQUENCE RECOGNITION PROTEIN FFH FROM THERMUS AQUATICUS
分子名称: 1,2-ETHANEDIOL, ACETIC ACID, CADMIUM ION, ...
著者Freymann, D.M, Stroud, R.M, Walter, P.
登録日1998-04-30
公開日1999-07-30
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Functional changes in the structure of the SRP GTPase on binding GDP and Mg2+GDP.
Nat.Struct.Biol., 6, 1999
2FR1
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BU of 2fr1 by Molmil
The first ketoreductase of the erythromycin synthase (crystal form 2)
分子名称: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, erythromycin synthase, EryAI
著者Keatinge-Clay, A.T, Stroud, R.M.
登録日2006-01-18
公開日2006-04-04
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献The Structure of a Ketoreductase Determines the Organization of the beta-Carbon Processing Enzymes of Modular Polyketide Synthases
Structure, 14, 2006
2FYP
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BU of 2fyp by Molmil
GRP94 in complex with the novel HSP90 Inhibitor Radester amine
分子名称: 2-(3-AMINO-2,5,6-TRIMETHOXYPHENYL)ETHYL 5-CHLORO-2,4-DIHYDROXYBENZOATE, Endoplasmin, PENTAETHYLENE GLYCOL, ...
著者Immormino, R.M, Gewirth, D.T.
登録日2006-02-08
公開日2007-02-06
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Inhibittory Ligands Adopt Different Conformations When Bound to Hsp90 or GRP94: Implications for Paralog-specific Drug Design
To be Published
6L3H
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BU of 6l3h by Molmil
Cryo-EM structure of dimeric quinol dependent Nitric Oxide Reductase (qNOR) from the pathogen Neisseria meninigitidis
分子名称: CALCIUM ION, FE (III) ION, Nitric-oxide reductase, ...
著者Jamali, M.M.A, Gopalasingam, C.C, Johnson, R.M, Tosha, T, Muench, S.P, Muramoto, K, Antonyuk, S.V, Shiro, Y, Hasnain, S.S.
登録日2019-10-11
公開日2020-04-01
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.06 Å)
主引用文献The active form of quinol-dependent nitric oxide reductase fromNeisseria meningitidisis a dimer.
Iucrj, 7, 2020
1RZ9
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BU of 1rz9 by Molmil
Crystal Structure of AAV Rep complexed with the Rep-binding sequence
分子名称: 26-MER, Rep protein
著者Hickman, A.B, Ronning, D.R, Perez, Z.N, Kotin, R.M, Dyda, F.
登録日2003-12-24
公開日2004-02-17
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献The nuclease domain of adeno-associated virus rep coordinates replication initiation using two distinct DNA recognition interfaces.
Mol.Cell, 13, 2004
4IAO
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BU of 4iao by Molmil
Crystal structure of Sir2 C543S mutant in complex with SID domain of Sir4
分子名称: ADENOSINE-5-DIPHOSPHORIBOSE, NAD-dependent histone deacetylase SIR2, Regulatory protein SIR4, ...
著者Hsu, H.C, Wang, C.L, Wang, M, Yang, N, Chen, Z, Sternglanz, R, Xu, R.M.
登録日2012-12-07
公開日2012-12-26
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.901 Å)
主引用文献Structural basis for allosteric stimulation of Sir2 activity by Sir4 binding
Genes Dev., 27, 2013
1Y6I
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BU of 1y6i by Molmil
Synechocystis GUN4
分子名称: Mg-chelatase cofactor GUN4
著者Verdecia, M.A, Larkin, R.M, Ferrer, J.L, Riek, R, Chory, J, Noel, J.P.
登録日2004-12-06
公開日2005-05-31
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Structure of the Mg-chelatase cofactor GUN4 reveals a novel hand-shaped fold for porphyrin binding
Plos Biol., 3, 2005
1Y6A
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BU of 1y6a by Molmil
Crystal structure of VEGFR2 in complex with a 2-anilino-5-aryl-oxazole inhibitor
分子名称: N-[5-(ETHYLSULFONYL)-2-METHOXYPHENYL]-5-[3-(2-PYRIDINYL)PHENYL]-1,3-OXAZOL-2-AMINE, Vascular endothelial growth factor receptor 2
著者Harris, P.A, Cheung, M, Hunter, R.N, Brown, M.L, Veal, J.M, Nolte, R.T, Wang, L, Liu, W, Crosby, R.M, Johnson, J.H, Epperly, A.H, Kumar, R, Luttrell, D.K, Stafford, J.A.
登録日2004-12-05
公開日2005-06-07
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Discovery and evaluation of 2-anilino-5-aryloxazoles as a novel class of VEGFR2 kinase inhibitors.
J.Med.Chem., 48, 2005
1YFP
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BU of 1yfp by Molmil
STRUCTURE OF YELLOW-EMISSION VARIANT OF GFP
分子名称: YELLOW FLUORESCENT PROTEIN
著者Wachter, R.M, Elsliger, M.-A, Kallio, K, Hanson, G.T, Remington, S.J.
登録日1998-08-28
公開日1998-10-28
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural basis of spectral shifts in the yellow-emission variants of green fluorescent protein.
Structure, 6, 1998
3OLV
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BU of 3olv by Molmil
Structural and functional effects of substitution at position T+1 in CheY: CheYA88V-BeF3-Mg complex
分子名称: BERYLLIUM TRIFLUORIDE ION, Chemotaxis protein CheY, MAGNESIUM ION, ...
著者Immormino, R.M, Bourret, R.B.
登録日2010-08-26
公開日2011-08-31
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.697 Å)
主引用文献A Variable Active Site Residue Influences the Kinetics of Response Regulator Phosphorylation and Dephosphorylation.
Biochemistry, 55, 2016
3OLY
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BU of 3oly by Molmil
Structural and functional effects of substitution at position T+1 in CheY: CheYA88M-BeF3-Mn complex
分子名称: BERYLLIUM TRIFLUORIDE ION, Chemotaxis protein CheY, GLYCEROL, ...
著者Immormino, R.M, Bourret, R.B.
登録日2010-08-26
公開日2011-08-31
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献A Variable Active Site Residue Influences the Kinetics of Response Regulator Phosphorylation and Dephosphorylation.
Biochemistry, 55, 2016
4LAB
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BU of 4lab by Molmil
Crystal structure of the catalytic domain of RluB
分子名称: CHLORIDE ION, PLATINUM (II) ION, Ribosomal large subunit pseudouridine synthase B
著者Czudnochowski, N, Finer-Moore, J.S, Stroud, R.M.
登録日2013-06-19
公開日2013-11-20
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.5043 Å)
主引用文献The mechanism of pseudouridine synthases from a covalent complex with RNA, and alternate specificity for U2605 versus U2604 between close homologs.
Nucleic Acids Res., 42, 2014
6LXD
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BU of 6lxd by Molmil
Pri-miRNA bound DROSHA-DGCR8 complex
分子名称: Microprocessor complex subunit DGCR8, RNA (102-mer), Ribonuclease 3, ...
著者Jin, W, Wang, J, Liu, C.P, Wang, H.W, Xu, R.M.
登録日2020-02-10
公開日2020-04-15
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structural Basis for pri-miRNA Recognition by Drosha.
Mol.Cell, 78, 2020
2BNU
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Structural and kinetic basis for heightened immunogenicity of T cell vaccines
分子名称: T-CELL RECEPTOR ALPHA CHAIN C REGION, T-CELL RECEPTOR BETA CHAIN C REGION
著者Chen, J.-L, Stewart-Jones, G, Bossi, G, Lissin, N.M, Wooldridge, L, Choi, E.M.L, Held, G, Dunbar, P.R, Esnouf, R.M, Sami, M, Boultier, J.M, Rizkallah, P.J, Renner, C, Sewell, A, Van Der Merwe, P.A, Jackobsen, B.K, Griffiths, G, Jones, E.Y, Cerundolo, V.
登録日2005-04-04
公開日2005-05-24
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structural and Kinetic Basis for Heightened Immunogenicity of T Cell Vaccines.
J.Exp.Med., 201, 2005
2G89
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L. casei thymidylate synthase Y261A in complex with substrate, dUMP
分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, thymidylate synthase
著者Finer-Moore, J.S, Stroud, R.M.
登録日2006-03-02
公開日2006-03-14
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The role of protein dynamics in thymidylate synthase catalysis: variants of conserved 2'-deoxyuridine 5'-monophosphate (dUMP)-binding Tyr-261
Biochemistry, 45, 2006
2GFA
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double tudor domain complex structure
分子名称: Jumonji domain-containing protein 2A, peptide
著者Huang, Y, Fang, J, Bedford, M.T, Zhang, Y, Xu, R.M.
登録日2006-03-21
公開日2006-05-02
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Recognition of histone H3 lysine-4 methylation by the double tudor domain of JMJD2A
Science, 312, 2006

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