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PDB: 2308 results

1RVT
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1930 H1 Hemagglutinin in complex with LSTC
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose, ...
Authors:Skehel, J.J, Gamblin, S.J, Haire, L.F, Russell, R.J, Stevens, D.J, Xiao, B, Ha, Y, Vasisht, N, Steinhauer, D.A, Daniels, R.S.
Deposit date:2003-12-15
Release date:2004-03-30
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The structure and receptor binding properties of the 1918 influenza hemagglutinin.
Science, 303, 2004
7A21
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BU of 7a21 by Molmil
Crystal structure of the ACVR1 (ALK2) kinase in complex with the compound M4K2158
Descriptor: 1,2-ETHANEDIOL, 4-methyl-3-[4-(pyrrolidin-1-ylmethyl)phenyl]-5-(3,4,5-trimethoxyphenyl)pyridine, Activin receptor type I, ...
Authors:Adamson, R.J, Williams, E.P, Smil, D, Burgess-Brown, N, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Bullock, A.N.
Deposit date:2020-08-14
Release date:2020-09-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Crystal structure of the ACVR1 (ALK2) kinase in complex with the compound M4K2153
To Be Published
3J8D
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BU of 3j8d by Molmil
Cryoelectron microscopy of dengue-Fab E104 complex at pH 5.5
Descriptor: Envelope protein E, antibody E111 Fab fragment, glycoprotein DIII
Authors:Zhang, X.Z, Sheng, J, Austin, S.K, Hoornweg, T, Smit, J.M, Kuhn, R.J, Diamond, M.S, Rossmann, M.G.
Deposit date:2014-10-13
Release date:2014-11-12
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (26 Å)
Cite:Structure of Acidic pH Dengue Virus Showing the Fusogenic Glycoprotein Trimers.
J.Virol., 89, 2015
6ZUL
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BU of 6zul by Molmil
Crystal structure of dimethylated RSL in complex with cucurbit[7]uril and zinc
Descriptor: Fucose-binding lectin protein, GLYCEROL, SODIUM ION, ...
Authors:Guagnini, F, Engilberge, S, Flood, R.J, Ramberg, K.O, Crowley, P.B.
Deposit date:2020-07-23
Release date:2020-11-25
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Metal-Mediated Protein-Cucurbituril Crystalline Architectures
Cryst.Growth Des., 2020
1RD4
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BU of 1rd4 by Molmil
An allosteric inhibitor of LFA-1 bound to its I-domain
Descriptor: 1-ACETYL-4-(4-{4-[(2-ETHOXYPHENYL)THIO]-3-NITROPHENYL}PYRIDIN-2-YL)PIPERAZINE, Integrin alpha-L
Authors:Crump, M.P, Ceska, T.A, Spyracopoulos, L, Henry, A, Archibald, S.C, Alexander, R, Taylor, R.J, Findlow, S.C, O'Connell, J, Robinson, M.K, Shock, A.
Deposit date:2003-11-05
Release date:2004-03-30
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of an allosteric inhibitor of LFA-1 bound to the I-domain studied by crystallography, NMR, and calorimetry
Biochemistry, 43, 2004
6ZUM
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BU of 6zum by Molmil
Crystal structure of dimethylated RSL-N23H (RSL-B3) in complex with cucurbit[7]uril and zinc
Descriptor: ACETATE ION, Fucose-binding lectin protein, SODIUM ION, ...
Authors:Guagnini, F, Engilberge, S, Flood, R.J, Ramberg, K.O, Crowley, P.B.
Deposit date:2020-07-23
Release date:2020-11-25
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.589 Å)
Cite:Metal-Mediated Protein-Cucurbituril Crystalline Architectures
Cryst.Growth Des., 2020
6TJJ
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BU of 6tjj by Molmil
Structure of Cerezyme at pH 4.6
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, ...
Authors:Rowland, R.J, Davies, G.J.
Deposit date:2019-11-26
Release date:2020-06-10
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:A baculoviral system for the production of human beta-glucocerebrosidase enables atomic resolution analysis.
Acta Crystallogr D Struct Biol, 76, 2020
7BZJ
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BU of 7bzj by Molmil
The Discovery of Benzhydrol-Oxaborole Hybrid Derivatives as Leucyl-tRNA Synthetase Inhibitors
Descriptor: Leucine--tRNA ligase, [(1~{R},5~{R},6~{S},8~{R})-8-(6-aminopurin-9-yl)-4'-[(~{R})-oxidanyl-[4-(2-oxidanylidenepropylsulfanyl)phenyl]methyl]spiro[2,4,7-trioxa-3-boranuidabicyclo[3.3.0]octane-3,7'-7-boranuidabicyclo[4.3.0]nona-1(6),2,4-triene]-6-yl]methoxy-tris(oxidanyl)phosphanium
Authors:Liu, R.J, Li, H, Wang, E.D, Zhou, H.
Deposit date:2020-04-28
Release date:2020-12-09
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Discovery of benzhydrol-oxaborole derivatives as Streptococcus pneumoniae leucyl-tRNA synthetase inhibitors.
Bioorg.Med.Chem., 29, 2021
7C22
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BU of 7c22 by Molmil
Crystal structure of the C-terminal domain of SARS-CoV-2 nucleocapsid protein
Descriptor: ACETATE ION, DI(HYDROXYETHYL)ETHER, Nucleoprotein
Authors:Zhou, R.J, Zeng, R, Lei, J.
Deposit date:2020-05-07
Release date:2020-05-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural characterization of the C-terminal domain of SARS-CoV-2 nucleocapsid protein.
Mol Biomed, 1, 2020
6T2R
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BU of 6t2r by Molmil
Prominent members of the human gut microbiota express endo-acting O-glycanases to initiate mucin breakdown
Descriptor: Beta-glycosidase, SULFATE ION
Authors:Crouch, L.I, Liberato, M.V, Ubranowicz, P.A, Basle, A, Lamb, C.A, Cooke, K, Doona, M, Needham, S, Brady, R.R, Berrington, J.E, Madubic, K, Chater, P, Zhang, F, Linhardt, R.J, Spence, D.I.R, Bolam, D.N.
Deposit date:2019-10-09
Release date:2020-07-08
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Prominent members of the human gut microbiota express endo-acting O-glycanases to initiate mucin breakdown.
Nat Commun, 11, 2020
6T6D
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BU of 6t6d by Molmil
Crystal structure of the ACVR1 (ALK2) kinase in complex with the compound M4K2149
Descriptor: 2-methoxy-4-[4-methyl-5-(4-piperazin-1-ylphenyl)pyridin-3-yl]benzamide, Activin receptor type I, SULFATE ION
Authors:Adamson, R.J, Williams, E.P, Smil, D, Burgess-Brown, N, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Bullock, A.N.
Deposit date:2019-10-18
Release date:2019-10-30
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.56 Å)
Cite:Targeting ALK2: An Open Science Approach to Developing Therapeutics for the Treatment of Diffuse Intrinsic Pontine Glioma.
J.Med.Chem., 63, 2020
6T2S
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BU of 6t2s by Molmil
Prominent members of the human gut microbiota express endo-acting O-glycanases to initiate mucin breakdown
Descriptor: Glycoside hydrolase family 16 protein, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose
Authors:Crouch, L.I, Liberato, M.V, Ubranowicz, P.A, Basle, A, Lamb, C.A, Cooke, K, Doona, M, Needham, S, Brady, R.R, Berrington, J.E, Madubic, K, Chater, P, Zhang, F, Linhardt, R.J, Spence, D.I.R, Bolam, D.N.
Deposit date:2019-10-09
Release date:2020-07-08
Last modified:2020-08-26
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Prominent members of the human gut microbiota express endo-acting O-glycanases to initiate mucin breakdown.
Nat Commun, 11, 2020
1SF2
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BU of 1sf2 by Molmil
Structure of E. coli gamma-aminobutyrate aminotransferase
Descriptor: 1,2-ETHANEDIOL, 4-aminobutyrate aminotransferase, PYRIDOXAL-5'-PHOSPHATE, ...
Authors:Liu, W, Peterson, P.E, Carter, R.J, Zhou, X, Langston, J.A, Fisher, A.J, Toney, M.D.
Deposit date:2004-02-19
Release date:2004-09-14
Last modified:2018-01-31
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structures of unbound and aminooxyacetate-bound Escherichia coli gamma-aminobutyrate aminotransferase.
Biochemistry, 43, 2004
1SHU
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BU of 1shu by Molmil
Crystal Structure of the von Willebrand factor A domain of human capillary morphogenesis protein 2: an anthrax toxin receptor
Descriptor: Anthrax toxin receptor 2, MAGNESIUM ION
Authors:Lacy, D.B, Wigelsworth, D.J, Scobie, H.M, Young, J.A.T, Collier, R.J.
Deposit date:2004-02-26
Release date:2004-04-13
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal Structure of the von Willebrand factor A domain of human capillary morphogenesis protein 2: an anthrax toxin receptor
Proc.Natl.Acad.Sci.USA, 101, 2004
1SNZ
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BU of 1snz by Molmil
Crystal structure of apo human galactose mutarotase
Descriptor: aldose 1-epimerase
Authors:Thoden, J.B, Timson, D.J, Reece, R.J, Holden, H.M.
Deposit date:2004-03-12
Release date:2004-03-30
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Molecular structure of human galactose mutarotase
J.Biol.Chem., 279, 2004
6HA6
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BU of 6ha6 by Molmil
Factor Inhibiting HIF (FIH) in complex with zinc, NOG and TRPV3 (220-246)
Descriptor: GLYCEROL, Hypoxia-inducible factor 1-alpha inhibitor, N-OXALYLGLYCINE, ...
Authors:Leissing, T.M, Clifton, I.J, Saward, B.G, Lu, X, Hopkinson, R.J, Schofield, C.J.
Deposit date:2018-08-07
Release date:2019-08-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Factor Inhibiting HIF (FIH) in complex with zinc, NOG and TRPV3 (220-246)
To Be Published
6ZLO
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BU of 6zlo by Molmil
E2 core of the fungal Pyruvate dehydrogenase complex with asymmetric interior PX30 component
Descriptor: Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial
Authors:Forsberg, B.O, Howard, R.J, Aibara, S, Mortesaei, N, Lindahl, E.
Deposit date:2020-06-30
Release date:2020-09-23
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Arrangement and symmetry of the fungal E3BP-containing core of the pyruvate dehydrogenase complex.
Nat Commun, 11, 2020
3L1M
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BU of 3l1m by Molmil
Crystal Structure of a Ni-directed Dimer of Cytochrome cb562 with a Quinolate-Histidine Hybrid Coordination Motif
Descriptor: N-(8-hydroxyquinolin-5-yl)acetamide, NICKEL (II) ION, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Radford, R.J, Tezcan, F.A.
Deposit date:2009-12-13
Release date:2010-04-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Controlled protein dimerization through hybrid coordination motifs.
Inorg.Chem., 49, 2010
1T45
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BU of 1t45 by Molmil
STRUCTURAL BASIS FOR THE AUTOINHIBITION AND STI-571 INHIBITION OF C-KIT TYROSINE KINASE
Descriptor: Homo sapiens v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog
Authors:Mol, C.D, Dougan, D.R, Schneider, T.R, Skene, R.J, Kraus, M.L, Scheibe, D.N, Snell, G.P, Zou, H, Sang, B.C, Wilson, K.P.
Deposit date:2004-04-28
Release date:2004-06-15
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for the autoinhibition and STI-571 inhibition of c-Kit tyrosine kinase.
J.Biol.Chem., 279, 2004
1T74
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Crystal structure of the androgen receptor ligand binding domain in complex with a WxxLF motif
Descriptor: 1,2-ETHANEDIOL, 5-ALPHA-DIHYDROTESTOSTERONE, Androgen receptor, ...
Authors:Hur, E, Pfaff, S.J, Payne, E.S, Gron, H, Buehrer, B.M, Fletterick, R.J.
Deposit date:2004-05-07
Release date:2004-08-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Recognition and accommodation at the androgen receptor coactivator binding interface.
Plos Biol., 2, 2004
1T7E
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BU of 1t7e by Molmil
Crystal structure of mutant Pro9Ser of scorpion alpha-like neurotoxin BmK M1 from Buthus martensii Karsch
Descriptor: Alpha-like neurotoxin BmK-I, PHOSPHATE ION
Authors:Xiang, Y, Guan, R.J, He, X.L, Wang, C.G, Wang, M, Zhang, Y, Sundberg, E.J, Wang, D.C.
Deposit date:2004-05-09
Release date:2004-09-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural Mechanism Governing Cis and Trans Isomeric States and an Intramolecular Switch for Cis/Trans Isomerization of a Non-proline Peptide Bond Observed in Crystal Structures of Scorpion Toxins
J.Mol.Biol., 341, 2004
6ZUK
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BU of 6zuk by Molmil
Crystal structure of dimethylated RSL-N23H/G68H (RSL-B6) in complex with cucurbit[7]uril and zinc
Descriptor: Fucose-binding lectin protein, GLYCEROL, SODIUM ION, ...
Authors:Guagnini, F, Engilberge, S, Flood, R.J, Ramberg, K.O, Crowley, P.B.
Deposit date:2020-07-23
Release date:2020-11-25
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Metal-Mediated Protein-Cucurbituril Crystalline Architectures
Cryst.Growth Des., 2020
3KP9
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BU of 3kp9 by Molmil
Structure of a bacterial homolog of vitamin K epoxide reductase
Descriptor: MERCURY (II) ION, UBIQUINONE-10, VKORC1/thioredoxin domain protein
Authors:Li, W, Schulman, S, Dutton, R.J, Boyd, D, Beckwith, J, Rapoport, T.A.
Deposit date:2009-11-16
Release date:2010-02-09
Last modified:2021-10-13
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Structure of a bacterial homologue of vitamin K epoxide reductase.
Nature, 463, 2010
1T9E
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BU of 1t9e by Molmil
NMR solution structure of a disulfide analogue of the cyclic sunflower trypsin inhibitor SFTI-1
Descriptor: Trypsin inhibitor 1
Authors:Korsinczky, M.L.J, Clark, R.J, Craik, D.J.
Deposit date:2004-05-16
Release date:2005-05-03
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Disulfide bond mutagenesis and the structure and function of the head-to-tail macrocyclic trypsin inhibitor SFTI-1
Biochemistry, 44, 2005
1T64
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Crystal Structure of human HDAC8 complexed with Trichostatin A
Descriptor: CALCIUM ION, Histone deacetylase 8, SODIUM ION, ...
Authors:Somoza, J.R, Skene, R.J, Katz, B.A, Mol, C, Ho, J.D, Jennings, A.J, Luong, C, Arvai, A, Buggy, J.J, Chi, E, Tang, J, Sang, B.-C, Verner, E, Wynands, R, Leahy, E.M, Dougan, D.R, Snell, G, Navre, M, Knuth, M.W, Swanson, R.V, McRee, D.E, Tari, L.W.
Deposit date:2004-05-05
Release date:2004-07-27
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Snapshots of Human HDAC8 Provide Insights into the Class I Histone Deacetylases
Structure, 12, 2004

222415

數據於2024-07-10公開中

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