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PDB: 264 件

2D55
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Structural, physical and biological characteristics of RNA.DNA binding agent N8-actinomycin D
分子名称: ACTINOMYCIN D, DNA (5'-D(*GP*AP*AP*GP*CP*TP*TP*C)-3')
著者Shinomiya, M, Chu, W, Carlson, R.G, Weaver, R.F, Takusagawa, F.
登録日1995-05-01
公開日1995-10-15
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal Structure of the 2:1 Complex between D(Gaagcttc) and the Anticancer Drug Actinomycin D.
J.Mol.Biol., 225, 1992
209D
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Structural, physical and biological characteristics of RNA:DNA binding agent N8-actinomycin D
分子名称: DNA (5'-D(*GP*AP*AP*GP*CP*TP*TP*C)-3'), N8-ACTINOMYCIN D
著者Shinomiya, M, Chu, W, Carlson, R.G, Weaver, R.F, Takusagawa, F.
登録日1995-05-01
公開日1995-10-15
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural, Physical, and Biological Characteristics of RNA.DNA Binding Agent N8-Actinomycin D.
Biochemistry, 34, 1995
4V40
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BETA-GALACTOSIDASE
分子名称: BETA-GALACTOSIDASE, MAGNESIUM ION
著者Jacobson, R.H, Zhang, X, Dubose, R.F, Matthews, B.W.
登録日1994-07-18
公開日2014-07-09
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Three-dimensional structure of beta-galactosidase from E. coli.
Nature, 369, 1994
8E8O
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Cryo-EM structure of human ME3 in the presence of citrate
分子名称: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, NADP-dependent malic enzyme, mitochondrial
著者Yu, X, Grell, T.A.J, Shaffer, P.L, Steele, R, Sharma, S, Thompson, A.A, Tresadern, G, Ortiz-Meoz, R.F, Mason, M, Gomez-Tamayo, J.C, Riley, D, Wagner, M.V, Wadia, J.
登録日2022-08-25
公開日2023-02-08
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (2.77 Å)
主引用文献Integrative structural and functional analysis of human malic enzyme 3: A potential therapeutic target for pancreatic cancer.
Heliyon, 8, 2022
8E76
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Cryo-EM structure of Apo form ME3
分子名称: NADP-dependent malic enzyme, mitochondrial
著者Yu, X, Grell, T.A.J, Shaffer, P.L, Steele, R, Sharma, S, Thompson, A.A, Tresadern, G, Ortiz-Meoz, R.F, Mason, M, Gomez-Tamayo, J.C, Riley, D, Wagner, M.V, Wadia, J.
登録日2022-08-23
公開日2023-02-08
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (2.51 Å)
主引用文献Integrative structural and functional analysis of human malic enzyme 3: A potential therapeutic target for pancreatic cancer.
Heliyon, 8, 2022
8E78
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Cryo-EM structure of human ME3 in the presence of citrate
分子名称: NADP-dependent malic enzyme, mitochondrial
著者Yu, X, Grell, T.A.J, Shaffer, P.L, Steele, R, Sharma, S, Thompson, A.A, Tresadern, G, Ortiz-Meoz, R.F, Mason, M, Gomez-Tamayo, J.C, Riley, D, Wagner, M.V, Wadia, J.
登録日2022-08-23
公開日2023-02-08
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (2.77 Å)
主引用文献Integrative structural and functional analysis of human malic enzyme 3: A potential therapeutic target for pancreatic cancer.
Heliyon, 8, 2022
6EJF
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Thermus thermophilus PilF ATPase (apoprotein form)
分子名称: Type IV pilus assembly protein PilF
著者Derrick, J.P, Collins, R.F.
登録日2017-09-21
公開日2018-08-01
最終更新日2018-10-24
実験手法ELECTRON MICROSCOPY (8 Å)
主引用文献Structural cycle of the Thermus thermophilus PilF ATPase: the powering of type IVa pilus assembly.
Sci Rep, 8, 2018
4XH3
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Mechanistic insights into anchorage of the contractile ring from yeast to humans
分子名称: Actin-binding protein anillin
著者Sun, L.F, Guan, R.F, Chen, Z.C.
登録日2015-01-04
公開日2015-07-15
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Mechanistic insights into the anchorage of the contractile ring by anillin and mid1
Dev.Cell, 33, 2015
6F8L
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Thermus thermophilus PilF ATPase (AMPPNP-bound form)
分子名称: Type IV pilus assembly protein PilF
著者Derrick, J.P, Collins, R.F.
登録日2017-12-13
公開日2018-08-01
最終更新日2018-10-24
実験手法ELECTRON MICROSCOPY (8 Å)
主引用文献Structural cycle of the Thermus thermophilus PilF ATPase: the powering of type IVa pilus assembly.
Sci Rep, 8, 2018
5C53
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Probing the Structural and Molecular Basis of Nucleotide Selectivity by Human Mitochondrial DNA Polymerase gamma
分子名称: 2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE, DNA (26-MER), DNA (5'-D(*AP*AP*AP*AP*CP*GP*AP*GP*GP*GP*CP*CP*AP*GP*TP*GP*CP*CP*GP*TP*AP*C)-3'), ...
著者Sohl, C.D, Szymanski, M.R, Mislak, A.C, Shumate, C.K, Amiralaei, S, Schinazi, R.F, Anderson, K.S, Yin, Y.W.
登録日2015-06-19
公開日2016-01-27
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (3.567 Å)
主引用文献Probing the structural and molecular basis of nucleotide selectivity by human mitochondrial DNA polymerase gamma.
Proc.Natl.Acad.Sci.USA, 112, 2015
4V6Q
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Structural characterization of mRNA-tRNA translocation intermediates (class 5 of the six classes)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Agirrezabala, X, Liao, H, Schreiner, E, Fu, J, Ortiz-Meoz, R.F, Schulten, K, Green, R, Frank, J.
登録日2011-12-08
公開日2014-07-09
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (11.5 Å)
主引用文献Structural characterization of mRNA-tRNA translocation intermediates.
Proc.Natl.Acad.Sci.USA, 109, 2012
4V6R
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Structural characterization of mRNA-tRNA translocation intermediates (class 6 of the six classes)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Agirrezabala, X, Liao, H, Schreiner, E, Fu, J, Ortiz-Meoz, R.F, Schulten, K, Green, R, Frank, J.
登録日2011-12-08
公開日2014-07-09
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (11.5 Å)
主引用文献Structural characterization of mRNA-tRNA translocation intermediates.
Proc.Natl.Acad.Sci.USA, 109, 2012
4V6N
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Structural characterization of mRNA-tRNA translocation intermediates (50S ribosome of class2 of the six classes)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Agirrezabala, X, Liao, H, Schreiner, E, Fu, J, Ortiz-Meoz, R.F, Schulten, K, Green, R, Frank, J.
登録日2011-12-07
公開日2014-07-09
最終更新日2024-02-28
実験手法ELECTRON MICROSCOPY (12.1 Å)
主引用文献Structural characterization of mRNA-tRNA translocation intermediates.
Proc.Natl.Acad.Sci.USA, 109, 2012
6GDI
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Structure of P-glycoprotein(ABCB1) in the post-hydrolytic state
分子名称: Multidrug resistance protein 1A
著者Ford, R.C, Thonghin, N, Collins, R.F, Barbieri, A, Shafi, T, Siebert, A.
登録日2018-04-23
公開日2018-05-23
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (7.9 Å)
主引用文献Novel features in the structure of P-glycoprotein (ABCB1) in the post-hydrolytic state as determined at 7.9 angstrom resolution.
Bmc Struct.Biol., 18, 2018
7LMT
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Histone-lysine N-methyltransferase NSD2-PWWP1 with compound MRT10241866a
分子名称: Histone-lysine N-methyltransferase NSD2, UNKNOWN ATOM OR ION, ~{N}-cyclopropyl-3-oxidanylidene-~{N}-(thiophen-2-ylmethyl)-4~{H}-1,4-benzoxazine-7-carboxamide
著者Lei, M, Freitas, R.F, Dong, A, Schapira, M, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2021-02-05
公開日2021-03-10
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献Histone-lysine N-methyltransferase NSD2-PWWP1 with compound MRT10241866a
To Be Published
4YND
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The Discovery of A-893, A New Cell-Active Benzoxazinone Inhibitor of Lysine Methyltransferase SMYD2
分子名称: N-cyclohexyl-N~3~-[2-(3,4-dichlorophenyl)ethyl]-N-(2-{[(2R)-2-hydroxy-2-(3-oxo-3,4-dihydro-2H-1,4-benzoxazin-8-yl)ethyl]amino}ethyl)-beta-alaninamide, N-lysine methyltransferase SMYD2, S-ADENOSYLMETHIONINE, ...
著者Sweis, R.F, Wang, Z, Algire, M, Arrowsmith, C.H, Brown, P.J, Chiang, G.C, Guo, J, Jakob, C.G, Kennedy, S, Li, F, Soni, N.B, Vedadi, M, Pappano, W.N.
登録日2015-03-09
公開日2015-05-20
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献Discovery of A-893, A New Cell-Active Benzoxazinone Inhibitor of Lysine Methyltransferase SMYD2.
Acs Med.Chem.Lett., 6, 2015
7KQ4
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Structure of isethionate sulfite-lyase from Bilophila wadsworthia with glycerol bound
分子名称: GLYCEROL, Isethionate sulfite-lyase
著者Dawson, C.D, Backman, L.R.F, Drennan, C.L.
登録日2020-11-13
公開日2021-04-07
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.261 Å)
主引用文献Molecular basis of C-S bond cleavage in the glycyl radical enzyme isethionate sulfite-lyase.
Cell Chem Biol, 28, 2021
7KQ3
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Structure of isethionate sulfite-lyase from Bilophila wadsworthia with substrate isethionate bound
分子名称: 2-hydroxyethylsulfonic acid, Isethionate sulfite-lyase
著者Dawson, C.D, Backman, L.R.F, Drennan, C.L.
登録日2020-11-13
公開日2021-04-07
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.688 Å)
主引用文献Molecular basis of C-S bond cleavage in the glycyl radical enzyme isethionate sulfite-lyase.
Cell Chem Biol, 28, 2021
5C51
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Probing the Structural and Molecular Basis of Nucleotide Selectivity by Human Mitochondrial DNA Polymerase gamma
分子名称: DNA, DNA (5'-D(*(AD)P*AP*AP*AP*CP*GP*AP*GP*GP*GP*CP*CP*AP*GP*TP*GP*CP*CP*GP*TP*AP*C)-3'), DNA polymerase subunit gamma-1, ...
著者Sohl, C.D, Szymanski, M.R, Mislak, A.C, Shumate, C.K, Amiralaei, S, Schinazi, R.F, Anderson, K.S, Whitney, Y.Y.
登録日2015-06-19
公開日2016-05-11
最終更新日2016-05-18
実験手法X-RAY DIFFRACTION (3.426 Å)
主引用文献Probing the structural and molecular basis of nucleotide selectivity by human mitochondrial DNA polymerase gamma.
Proc.Natl.Acad.Sci.USA, 112, 2015
5C52
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Probing the Structural and Molecular Basis of Nucleotide Selectivity by Human Mitochondrial DNA Polymerase gamma
分子名称: DNA (26-MER), DNA (5'-D(*AP*AP*AP*AP*CP*GP*AP*GP*GP*GP*CP*CP*AP*GP*TP*GP*CP*CP*GP*TP*AP*C)-3'), DNA polymerase subunit gamma-1, ...
著者Sohl, C.D, Szymanski, M.R, Mislak, A.C, Shumate, C.K, Amiralaei, S, Schinazi, R.F, Anderson, K.S, Yin, Y.W.
登録日2015-06-19
公開日2016-05-11
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (3.637 Å)
主引用文献Probing the structural and molecular basis of nucleotide selectivity by human mitochondrial DNA polymerase gamma.
Proc.Natl.Acad.Sci.USA, 112, 2015
2K9S
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Solution structure of dna binding domain of E. coli arac
分子名称: Arabinose operon regulatory protein
著者Rodgers, M.E, Schleif, R.F.
登録日2008-10-23
公開日2008-11-25
最終更新日2024-05-08
実験手法SOLUTION NMR
主引用文献Solution structure of the DNA binding domain of AraC protein.
Proteins, 77, 2009
2P8O
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Crystal Structure of a Benzohydroxamic Acid/Vanadate complex bound to chymotrypsin A
分子名称: Chymotrypsin A chain A, Chymotrypsin A chain B, Chymotrypsin A chain C, ...
著者Moulin, A, Bell, J.H, Pratt, R.F, Ringe, D.
登録日2007-03-22
公開日2007-05-08
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Inhibition of chymotrypsin by a complex of ortho-vanadate and benzohydroxamic Acid: structure of the inert complex and its mechanistic interpretation.
Biochemistry, 46, 2007
2P9V
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Structure of AmpC beta-lactamase with cross-linked active site after exposure to small molecule inhibitor
分子名称: Beta-lactamase, PHOSPHATE ION
著者Babaoglu, K, Wyrembak, P.N, Pelto, R.B, Shoichet, B.K, Pratt, R.F.
登録日2007-03-26
公開日2007-08-14
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献O-Aryloxycarbonyl Hydroxamates: New beta-Lactamase Inhibitors That Cross-Link the Active Site.
J.Am.Chem.Soc., 129, 2007
4V6L
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Structural insights into cognate vs. near-cognate discrimination during decoding.
分子名称: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Agirrezabala, X, Schreiner, E, Trabuco, L.G, Lei, J, Ortiz-Meoz, R.F, Schulten, K, Green, R, Frank, J.
登録日2011-01-07
公開日2014-07-09
最終更新日2024-02-28
実験手法ELECTRON MICROSCOPY (13.2 Å)
主引用文献Structural insights into cognate versus near-cognate discrimination during decoding.
Embo J., 30, 2011
4V6S
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Structural characterization of mRNA-tRNA translocation intermediates (class 3 of the six classes)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Agirrezabala, X, Liao, H, Schreiner, E, Fu, J, Ortiz-Meoz, R.F, Schulten, K, Green, R, Frank, J.
登録日2011-12-09
公開日2014-07-09
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (13.1 Å)
主引用文献Structural characterization of mRNA-tRNA translocation intermediates.
Proc.Natl.Acad.Sci.USA, 109, 2012

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