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PDB: 27298 results

6G3R
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Structure of tellurium-centred Anderson-Evans polyoxotungstate (TEW) bound to the nucleotide binding domain of HSP70. Structure one of two TEW-HSP70 structures deposited.
Descriptor: 6-tungstotellurate(VI), ADENOSINE-5'-DIPHOSPHATE, Heat shock 70 kDa protein 1A, ...
Authors:Mac Sweeney, A, Chambovey, A, Wicki, M, Mueller, M, Artico, N, Lange, R, Bijelic, A, Breibeck, J, Rompel, A.
Deposit date:2018-03-26
Release date:2018-10-17
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The crystallization additive hexatungstotellurate promotes the crystallization of the HSP70 nucleotide binding domain into two different crystal forms.
PLoS ONE, 13, 2018
1YXQ
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Crystal structure of actin in complex with swinholide A
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Klenchin, V.A, King, R, Tanaka, J, Marriott, G, Rayment, I.
Deposit date:2005-02-22
Release date:2005-05-17
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Structural basis of swinholide a binding to actin
Chem.Biol., 12, 2005
6G51
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Cryo-EM structure of a late human pre-40S ribosomal subunit - State D
Descriptor: 18S ribosomal RNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ...
Authors:Ameismeier, M, Cheng, J, Berninghausen, O, Beckmann, R.
Deposit date:2018-03-28
Release date:2018-06-06
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Visualizing late states of human 40S ribosomal subunit maturation.
Nature, 558, 2018
2AJD
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BU of 2ajd by Molmil
Porcine dipeptidyl peptidase IV (CD26) in complex with L-Pro-boro-L-Pro (boroPro)
Descriptor: (2R)-N-[(2R)-2-(DIHYDROXYBORYL)-1-L-PROLYLPYRROLIDIN-2-YL]-N-[(5R)-5-(DIHYDROXYBORYL)-1-L-PROLYLPYRROLIDIN-2-YL]-L-PROLINAMIDE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Engel, M, Hoffmann, T, Manhart, S, Heiser, U, Chambre, S, Huber, R, Demuth, H.U, Bode, W.
Deposit date:2005-08-01
Release date:2006-02-28
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.56 Å)
Cite:Rigidity and flexibility of dipeptidyl peptidase IV: crystal structures of and docking experiments with DPIV.
J.Mol.Biol., 355, 2006
1YYL
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BU of 1yyl by Molmil
crystal structure of CD4M33, a scorpion-toxin mimic of CD4, in complex with HIV-1 YU2 gp120 envelope glycoprotein and anti-HIV-1 antibody 17b
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CD4M33, scorpion-toxin mimic of CD4, ...
Authors:Huang, C.C, Stricher, F, Martin, L, Decker, J.M, Majeed, S, Barthe, P, Hendrickson, W.A, Robinson, J, Roumestand, C, Sodroski, J, Wyatt, R, Shaw, G.M, Vita, C, Kwong, P.D.
Deposit date:2005-02-25
Release date:2005-05-03
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Scorpion-toxin mimics of CD4 in complex with human immunodeficiency virus gp120 crystal structures, molecular mimicry, and neutralization breadth.
Structure, 13, 2005
1YZF
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BU of 1yzf by Molmil
Crystal structure of the lipase/acylhydrolase from Enterococcus faecalis
Descriptor: lipase/acylhydrolase
Authors:Zhang, R, Hatzos, C, Clancy, S, Collart, F, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2005-02-28
Release date:2005-04-12
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of the lipase/acylhydrolase from Enterococcus faecalis
To be Published
7DFL
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BU of 7dfl by Molmil
Cryo-EM structure of histamine H1 receptor Gq complex
Descriptor: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(q) subunit alpha, ...
Authors:He, Y, Xia, R, Wang, N, Xu, Z.
Deposit date:2020-11-09
Release date:2021-03-31
Last modified:2021-04-21
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cryo-EM structure of the human histamine H 1 receptor/G q complex.
Nat Commun, 12, 2021
4RM1
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BU of 4rm1 by Molmil
The crystal structure of Y333Q mutant pyridoxal-dependent decarboxylase from Sphaerobacter thermophilus DSM 20745
Descriptor: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, CHLORIDE ION, GLYCEROL, ...
Authors:Wu, R, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-10-18
Release date:2014-11-12
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:The crystal structure of Y333Q mutant pyridoxal-dependent decarboxylase from Sphaerobacter thermophilus DSM 20745
To be Published
4ECB
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BU of 4ecb by Molmil
Chimeric GST Containing Inserts of Kininogen Peptides
Descriptor: chimeric protein between GSHKT10 and domain 5 of kininogen-1
Authors:Amber, A.B, Sergei, M.M, Yi, P, Rita, R, Xiaoping, Q, Marianne, P.-C, William, C.M, Vivien, Y, Keith, R.M, Anton, A.K.
Deposit date:2012-03-26
Release date:2012-05-16
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Chimeric glutathione S-transferases containing inserts of kininogen peptides: potential novel protein therapeutics.
J.Biol.Chem., 287, 2012
2AM1
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sp protein ligand 1
Descriptor: 2,4-DICHLORO-N-(3-CYANO-4,5,6,7-TETRAHYDRO-BENZOTHIOPHEN-2YL)-5-(MORPHOLINE-4-SULFONYL)-BENZAMIDE, GLYCEROL, UDP-N-acetylmuramoylalanine-D-glutamyl-lysine-D-alanyl-D-alanine ligase, ...
Authors:Longenecker, K.L, Stamper, G.F, Hajduk, P.J, Fry, E.H, Jakob, C.G, Harlan, J.E, Edalji, R, Bartley, D.M, Walter, K.A, Solomon, L.R.
Deposit date:2005-08-08
Release date:2006-01-24
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of MurF from Streptococcus pneumoniae co-crystallized with a small molecule inhibitor exhibits interdomain closure
Protein Sci., 14, 2005
3ZWM
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BU of 3zwm by Molmil
Crystal structure of ADP ribosyl cyclase complexed with substrate NAD and product cADPR
Descriptor: ADP-RIBOSYL CYLCASE, CYCLIC ADENOSINE DIPHOSPHATE-RIBOSE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Kotaka, M, Graeff, R, Zhang, L.H, Lee, H.C, Hao, Q.
Deposit date:2011-08-02
Release date:2011-11-30
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Studies of Intermediates Along the Cyclization Pathway of Aplysia Adp-Ribosyl Cyclase.
J.Mol.Biol., 415, 2012
3ZWO
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BU of 3zwo by Molmil
Crystal structure of ADP ribosyl cyclase complexed with reaction intermediate
Descriptor: 3-(AMINOCARBONYL)-1-[(2R,3R,4S,5R)-5-({[(S)-{[(S)-{[(2R,3S,4R,5R)-5-(2-AMINO-6-OXO-1,6-DIHYDRO-9H-PURIN-9-YL)-3,4-DIHYD ROXYTETRAHYDROFURAN-2-YL]METHOXY}(HYDROXY)PHOSPHORYL]OXY}(HYDROXY)PHOSPHORYL]OXY}METHYL)-3,4-DIHYDROXYTETRAHYDROFURAN-2- YL]PYRIDINIUM, ADP-RIBOSYL CYCLASE, GUANOSINE DIPHOSPHATE RIBOSE
Authors:Kotaka, M, Graeff, R, Zhang, L.H, Lee, H.C, Hao, Q.
Deposit date:2011-08-02
Release date:2011-11-30
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Studies of Intermediates Along the Cyclization Pathway of Aplysia Adp-Ribosyl Cyclase.
J.Mol.Biol., 415, 2012
4TSH
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BU of 4tsh by Molmil
A Novel Protein Fold Forms an Intramolecular Lock to Stabilize the Tertiary Structure of Streptococcus mutans Adhesin P1
Descriptor: CALCIUM ION, MAGNESIUM ION, Surface protein adhesin
Authors:Heim, K.P, Kailasan, S, McKenna, R, Brady, L.J.
Deposit date:2014-06-18
Release date:2014-10-22
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:An intramolecular lock facilitates folding and stabilizes the tertiary structure of Streptococcus mutans adhesin P1.
Proc.Natl.Acad.Sci.USA, 111, 2014
3ZWY
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BU of 3zwy by Molmil
Crystal structure of ADP-ribosyl cyclase complexed with 8-bromo-ADP- ribose and cyclic 8-bromo-cyclic-ADP-ribose
Descriptor: (2R,3R,4S,5R,13R,14S,15R,16R)-24-amino-18-bromo-3,4,14,15-tetrahydroxy-7,9,11,25,26-pentaoxa-17,19,22-triaza-1-azonia-8 ,10-diphosphapentacyclo[18.3.1.1^2,5^.1^13,16^.0^17,21^]hexacosa-1(24),18,20,22-tetraene-8,10-diolate 8,10-dioxide, ADP-RIBOSYL CYCLASE, [(2R,3S,4R,5R)-5-(6-amino-8-bromo-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl [(2R,3S,4S)-3,4-dihydroxytetrahydrofuran-2-yl]methyl dihydrogen diphosphate
Authors:Kotaka, M, Graeff, R, Zhang, L.H, Lee, H.C, Hao, Q.
Deposit date:2011-08-03
Release date:2012-08-22
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Studies of Intermediates Along the Cyclization Pathway of Aplysia Adp-Ribosyl Cyclase.
To be Published
1KFU
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BU of 1kfu by Molmil
Crystal Structure of Human m-Calpain Form II
Descriptor: M-CALPAIN LARGE SUBUNIT, M-CALPAIN SMALL SUBUNIT
Authors:Strobl, S, Fernandez-Catalan, C, Braun, M, Huber, R, Masumoto, H, Nakagawa, K, Irie, A, Sorimachi, H, Bourenkow, G, Bartunik, H, Suzuki, K, Bode, W.
Deposit date:2001-11-23
Release date:2001-12-07
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The crystal structure of calcium-free human m-calpain suggests an electrostatic switch mechanism for activation by calcium.
Proc.Natl.Acad.Sci.USA, 97, 2000
2AJC
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BU of 2ajc by Molmil
Porcine dipeptidyl peptidase IV (CD26) in complex with 4-(2-Aminoethyl)-benzene sulphonyl fluoride (AEBSF)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-AMINOETHYL)BENZENESULFONYL FLUORIDE, ...
Authors:Engel, M, Hoffmann, T, Manhart, S, Heiser, U, Chambre, S, Huber, R, Demuth, H.U, Bode, W.
Deposit date:2005-08-01
Release date:2006-02-28
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Rigidity and flexibility of dipeptidyl peptidase IV: crystal structures of and docking experiments with DPIV.
J.Mol.Biol., 355, 2006
4ROS
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BU of 4ros by Molmil
Crystal structure of Methylobacterium extorquens malate dehydrogenase complexed with oxaloacetate and adenosine-5-diphosphoribose
Descriptor: ADENOSINE-5-DIPHOSPHORIBOSE, CALCIUM ION, Malate dehydrogenase, ...
Authors:Gonzalez, J.M, Marti-Arbona, R, Unkefer, C.J.
Deposit date:2014-10-28
Release date:2014-12-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of Methylobacterium extorquens malate dehydrogenase complexed with oxaloacetate and adenosine-5-diphosphoribose
To be Published
2AP3
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BU of 2ap3 by Molmil
1.6 A Crystal Structure of a Conserved Protein of Unknown Function from Staphylococcus aureus
Descriptor: conserved hypothetical protein
Authors:Zhang, R, Zhou, M, Joachimiak, G, Schneewind, O, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2005-08-15
Release date:2005-09-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:1.6A crystal structure of a conserved hypothetical protein from Staphylococcus aureus MW2
To be Published
2AKR
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BU of 2akr by Molmil
Structural basis of sulfatide presentation by mouse CD1d
Descriptor: (15Z)-N-((1S,2R,3E)-2-HYDROXY-1-{[(3-O-SULFO-BETA-D-GALACTOPYRANOSYL)OXY]METHYL}HEPTADEC-3-ENYL)TETRACOS-15-ENAMIDE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zajonc, D.M, Halder, R, Wu, D, Maricic, I, Roy, K, Wong, C.-H, Kumar, V, Wilson, I.A.
Deposit date:2005-08-03
Release date:2005-12-06
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for CD1d presentation of a sulfatide derived from myelin and its implications for autoimmunity
J.Exp.Med., 202, 2005
6FWN
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BU of 6fwn by Molmil
Structure and dynamics of the platelet integrin-binding C4 domain of von Willebrand factor
Descriptor: von Willebrand factor
Authors:Xu, E.-R, von Buelow, S, Chen, P.-C, Lenting, P.J, Kolsek, K, Aponte-Santamaria, C, Simon, B, Foot, J, Obser, T, Graeter, F, Schneppenheim, R, Denis, C.V, Wilmanns, M, Hennig, J.
Deposit date:2018-03-06
Release date:2018-10-24
Last modified:2019-05-08
Method:SOLUTION NMR
Cite:Structure and dynamics of the platelet integrin-binding C4 domain of von Willebrand factor.
Blood, 133, 2019
1KS2
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BU of 1ks2 by Molmil
Crystal Structure Analysis of the rpiA, Structural Genomics, protein EC1268.
Descriptor: protein EC1268, RPIA
Authors:Zhang, R, Joachimiak, A, Edwards, A.M, Skarina, T, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2002-01-10
Release date:2002-08-14
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure of Escherichia coli ribose-5-phosphate isomerase: a ubiquitous enzyme of the pentose phosphate pathway and the Calvin cycle.
STRUCTURE, 11, 2003
1Z58
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BU of 1z58 by Molmil
Crystal structure of a complex of the ribosome large subunit with rapamycin
Descriptor: 23S RIBOSOMAL RNA, RAPAMYCIN IMMUNOSUPPRESSANT DRUG
Authors:Amit, M, Berisio, R, Baram, D, Harms, J, Bashan, A, Yonath, A.
Deposit date:2005-03-17
Release date:2005-06-28
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:A crevice adjoining the ribosome tunnel: Hints for cotranslational folding.
Febs Lett., 579, 2005
2AM2
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BU of 2am2 by Molmil
sp protein ligand 2
Descriptor: 2-CHLORO-N-(3-CYANO-5,6-DIHYDRO-4H-CYCLOPENTA[B]THIOPHEN-2-YL)-5-DIETHYLSULFAMOYL-BENZAMIDE, UDP-N-acetylmuramoylalanine-D-glutamyl-lysine-D-alanyl-D-alanine ligase, MurF protein
Authors:Longenecker, K.L, Stamper, G.F, Hajduk, P.J, Fry, E.H, Jakob, C.G, Harlan, J.E, Edalji, R, Bartley, D.M, Walter, K.A, Solomon, L.R.
Deposit date:2005-08-08
Release date:2006-01-24
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of MurF from Streptococcus pneumoniae co-crystallized with a small molecule inhibitor exhibits interdomain closure
Protein Sci., 14, 2005
2AS6
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BU of 2as6 by Molmil
cytochrome c peroxidase in complex with cyclopentylamine
Descriptor: CYCLOPENTANAMINE, Cytochrome c peroxidase, mitochondrial, ...
Authors:Brenk, R, Vetter, S.W, Boyce, S.E, Goodin, D.B, Shoichet, B.K.
Deposit date:2005-08-22
Release date:2006-04-11
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Probing molecular docking in a charged model binding site.
J.Mol.Biol., 357, 2006
1Z94
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X-Ray Crystal Structure of Protein CV1439 from Chromobacterium violaceum. Northeast Structural Genomics Consortium Target CvR12.
Descriptor: conserved hypothetical protein
Authors:Kuzin, A, Vorobiev, S.M, Yong, W, Forouhar, F, Xio, R, Ma, L.-C, Acton, T, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2005-03-31
Release date:2005-05-10
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of the Hypothetical Protein CV1439 from Chromobacterium violaceum. Northeast Structural Genomics Consortium Target CVR12.
To be Published

224004

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