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PDB: 27201 results

7NTO
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BU of 7nto by Molmil
The structure of RRM domain of human TRMT2A at 1.23 A resolution
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, SODIUM ION, ...
Authors:Witzenberger, M, Janowski, R, Davydova, E, Niessing, D.
Deposit date:2021-03-10
Release date:2022-01-19
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:Small-molecule modulators of TRMT2A decrease PolyQ aggregation and PolyQ-induced cell death.
Comput Struct Biotechnol J, 20, 2022
7NUZ
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BU of 7nuz by Molmil
Proteinase K structure at atomic resolution from crystals grown in agarose gel
Descriptor: GLYCEROL, MAGNESIUM ION, NITRATE ION, ...
Authors:Gavira, J.A, Artusio, F, Castellvi, A, Pisano, R.
Deposit date:2021-03-15
Release date:2022-01-19
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.09 Å)
Cite:Tuning Transport Phenomena in Agarose Gels for the Control of Protein Nucleation Density and Crystal Form
Crystals, 2021
8JER
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BU of 8jer by Molmil
Structure of Acipimox-GPR109A-G protein complex
Descriptor: 5-methyl-4-oxidanyl-pyrazin-4-ium-2-carboxylic acid, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Yadav, M.K, Sarma, P, Chami, M, Banerjee, R, Shukla, A.K.
Deposit date:2023-05-16
Release date:2024-03-06
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.45 Å)
Cite:Structure-guided engineering of biased-agonism in the human niacin receptor via single amino acid substitution.
Nat Commun, 15, 2024
8J9F
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BU of 8j9f by Molmil
Structure of STG-hydrolyzing beta-glucosidase 1 (PSTG1)
Descriptor: Beta-glucosidase, GLYCEROL
Authors:Yanai, T, Imaizumi, R, Takahashi, Y, Katsumura, E, Yamamoto, M, Nakayama, T, Yamashita, S, Takeshita, K, Sakai, N, Matsuura, H.
Deposit date:2023-05-03
Release date:2024-04-10
Last modified:2024-07-17
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Structural insights into a bacterial beta-glucosidase capable of degrading sesaminol triglucoside to produce sesaminol: toward the understanding of the aglycone recognition mechanism by the C-terminal lid domain.
J.Biochem., 174, 2023
6Y78
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BU of 6y78 by Molmil
Structure of galectin-3C in complex with lactose determined by serial crystallography using a silicon nitride membrane support
Descriptor: Galectin-3, beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
Authors:Hakansson, M, Welin, M, Shilova, A, Kovacic, R, Mueller, U, Logan, D.T.
Deposit date:2020-02-28
Release date:2020-07-29
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Current status and future opportunities for serial crystallography at MAX IV Laboratory.
J.Synchrotron Radiat., 27, 2020
6YLG
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BU of 6ylg by Molmil
Rix1-Rea1 pre-60S particle - 60S core, body 1 (rigid body refinement)
Descriptor: 25S rRNA, 5.8S rRNA, 5S rRNA, ...
Authors:Kater, L, Beckmann, R.
Deposit date:2020-04-07
Release date:2020-07-29
Last modified:2020-09-02
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Construction of the Central Protuberance and L1 Stalk during 60S Subunit Biogenesis.
Mol.Cell, 79, 2020
5GQE
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BU of 5gqe by Molmil
Crystal structure of michaelis complex of xylanase mutant (T82A, N127S, and E128H) from Streptomyces olivaceoviridis E-86
Descriptor: Beta-xylanase, beta-D-xylopyranose-(1-4)-beta-D-xylopyranose, beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose, ...
Authors:Suzuki, R, Fujimoto, Z, Kaneko, S, Kuno, A.
Deposit date:2016-08-07
Release date:2017-08-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Azidolysis by the Formation of Stable Ser-His Catalytic Dyad in a Glycoside Hydrolase Family 10 Xylanase Mutant
J.Appl.Glyosci., 65, 2019
5GR0
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BU of 5gr0 by Molmil
Crystal structure of branching enzyme D501A mutant from Cyanothece sp. ATCC 51142
Descriptor: 1,4-alpha-glucan branching enzyme GlgB, GLYCEROL, MAGNESIUM ION
Authors:Suzuki, R, Suzuki, E.
Deposit date:2016-08-08
Release date:2017-08-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural basis for substrate binding and catalysis of branching enzyme from Cyanothece sp. ATCC 51142
To be published
5GIQ
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BU of 5giq by Molmil
Xaa-Pro peptidase from Deinococcus radiodurans, Zinc bound
Descriptor: PHOSPHATE ION, Proline dipeptidase, ZINC ION
Authors:Are, V.N, Singh, R, Kumar, A, Ghosh, B, Jamdar, S.N, Makde, R.D.
Deposit date:2016-06-24
Release date:2017-06-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structures and activities of widely conserved small prokaryotic aminopeptidases-P clarify classification of M24B peptidases.
Proteins, 2018
7O5B
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BU of 7o5b by Molmil
Cryo-EM structure of a Bacillus subtilis MifM-stalled ribosome-nascent chain complex with (p)ppGpp-SRP bound
Descriptor: 16S rRNA (1533-MER), 23S rRNA (2887-MER), 30S ribosomal protein S10, ...
Authors:Kratzat, H, Czech, L, Berninghausen, O, Bange, G, Beckmann, R.
Deposit date:2021-04-08
Release date:2022-02-02
Last modified:2022-03-09
Method:ELECTRON MICROSCOPY (3.33 Å)
Cite:Inhibition of SRP-dependent protein secretion by the bacterial alarmone (p)ppGpp.
Nat Commun, 13, 2022
7OCI
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BU of 7oci by Molmil
Cryo-EM structure of yeast Ost6p containing oligosaccharyltransferase complex
Descriptor: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Wild, R, Neuhaus, J.D, Eyring, J, Irobalieva, R.N, Kowal, J, Lin, C.W, Locher, K.P, Aebi, M.
Deposit date:2021-04-27
Release date:2022-02-16
Method:ELECTRON MICROSCOPY (3.46 Å)
Cite:Functional analysis of Ost3p and Ost6p containing yeast oligosaccharyltransferases.
Glycobiology, 31, 2021
6YLV
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BU of 6ylv by Molmil
Translation initiation factor 4E in complex with 4-Cl-Bn7GpppG mRNA 5' cap analog
Descriptor: 4-Cl-Bn7GpppG mRNA 5' cap analog, Eukaryotic translation initiation factor 4E, GLYCEROL
Authors:Kubacka, D, Wojcik, R, Baranowski, M.R, Kowalska, J, Jemielity, J.
Deposit date:2020-04-07
Release date:2020-06-10
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.66005659 Å)
Cite:Novel N7-Arylmethyl Substituted Dinucleotide mRNA 5' cap Analogs: Synthesis and Evaluation as Modulators of Translation.
Pharmaceutics, 13, 2021
7NSG
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BU of 7nsg by Molmil
Structure of human excitatory amino acid transporter 3 (EAAT3) in complex with HIP-B
Descriptor: (+)-3-Hydroxy-4,5,6,6a-tetrahydro-3aH-pyrrolo[3,4-d]isoxazole-6-carboxylic acid, (-)-3-Hydroxy-4,5,6,6a-tetrahydro-3aH-pyrrolo[3,4-d]isoxazole-6-carboxylic acid, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, ...
Authors:Baronina, A, Pike, A.C.W, Yu, X, Dong, Y.Y, Shintre, C.A, Tessitore, A, Chu, A, Rotty, B, Venkaya, S, Mukhopadhyay, S.M.M, Borkowska, O, Chalk, R, Shrestha, L, Burgess-Brown, N.A, Edwards, A.M, Arrowsmith, C.H, Bountra, C, Han, S, Carpenter, E.P, Structural Genomics Consortium (SGC)
Deposit date:2021-03-05
Release date:2022-03-16
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.34 Å)
Cite:Structure of human excitatory amino acid transporter 3 (EAAT3) in complex with HIP-B
TO BE PUBLISHED
3A0J
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BU of 3a0j by Molmil
Crystal structure of cold shock protein 1 from Thermus thermophilus HB8
Descriptor: Cold shock protein
Authors:Miyazaki, T, Nakagawa, N, Kuramitsu, S, Masui, R, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2009-03-19
Release date:2010-03-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:The Biological Action of Cold Shock Protein 1 from Thermus thermophilus HB8
To be Published
6YMD
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BU of 6ymd by Molmil
Crystal structure of serine hydroxymethyltransferase from Aphanothece halophytica in the covalent complex with malonate
Descriptor: 1,2-ETHANEDIOL, 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, MALONATE ION, ...
Authors:Ruszkowski, M, Sekula, B, Nogues, I, Tramonti, A, Angelaccio, S, Contestabile, R.
Deposit date:2020-04-08
Release date:2020-06-03
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Structural and kinetic properties of serine hydroxymethyltransferase from the halophytic cyanobacterium Aphanothece halophytica provide a rationale for salt tolerance.
Int.J.Biol.Macromol., 159, 2020
8J5G
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BU of 8j5g by Molmil
Crystal structure of kinase AbmG in complex with 4'-hydroxy-4'-thiocytidine 5'-diphosphate
Descriptor: Deoxyadenosine/deoxycytidine kinase, [(2~{S},3~{S},4~{R},5~{R})-5-(4-azanyl-2-oxidanylidene-pyrimidin-1-yl)-2-(hydroxymethyl)-3,4-bis(oxidanyl)thiolan-2-yl] phosphono hydrogen phosphate
Authors:Ushimaru, R, Mori, T, Liu, H.-w, Abe, I.
Deposit date:2023-04-22
Release date:2024-04-24
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of kinase AbmG in complex with 4'-hydroxy-4'-thiocytidine 5'-diphosphate
To Be Published
8J5H
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BU of 8j5h by Molmil
Crystal structure of kinase AbmG in complex with 4'-hydroxy-4'-thiocytidine
Descriptor: 4-azanyl-1-[(2~{R},3~{R},4~{S},5~{S})-5-(hydroxymethyl)-3,4,5-tris(oxidanyl)thiolan-2-yl]pyrimidin-2-one, Deoxyadenosine/deoxycytidine kinase, NITRATE ION
Authors:Ushimaru, R, Mori, T, Liu, H.-w, Abe, I.
Deposit date:2023-04-22
Release date:2024-04-24
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of kinase AbmG in complex with 4'-hydroxy-4'-thiocytidine
To Be Published
6Y3H
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BU of 6y3h by Molmil
NMR solution structure of the hazelnut allergen Cor a 1.0401
Descriptor: Major allergen Cor a 1.0401
Authors:Fuehrer, S, Kamenik, A.S, Zeindl, R, Nothegger, B, Hofer, F, Reider, N, Liedl, K.R, Tollinger, M.
Deposit date:2020-02-18
Release date:2021-02-17
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Inverse relation between structural flexibility and IgE reactivity of Cor a 1 hazelnut allergens.
Sci Rep, 11, 2021
5GQU
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BU of 5gqu by Molmil
Crystal structure of branching enzyme from Cyanothece sp. ATCC 51142
Descriptor: 1,4-alpha-glucan branching enzyme GlgB, GLYCEROL, MAGNESIUM ION
Authors:Suzuki, R, Suzuki, E.
Deposit date:2016-08-08
Release date:2017-02-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Bound Substrate in the Structure of Cyanobacterial Branching Enzyme Supports a New Mechanistic Model
J. Biol. Chem., 292, 2017
7O3D
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BU of 7o3d by Molmil
Cooperation between the intrinsically disordered and ordered regions of Spt6 regulates nucleosome and Pol II CTD binding, and nucleosome assembly
Descriptor: Transcription elongation factor SPT6
Authors:Kasiliauskaite, A, Kubicek, K, Klumpler, T, Zanova, M, Zapletal, D, Novacek, J, Stefl, R.
Deposit date:2021-04-01
Release date:2022-04-13
Last modified:2022-06-15
Method:ELECTRON MICROSCOPY (3.71 Å)
Cite:Cooperation between intrinsically disordered and ordered regions of Spt6 regulates nucleosome and Pol II CTD binding, and nucleosome assembly.
Nucleic Acids Res., 50, 2022
5GR6
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BU of 5gr6 by Molmil
Crystal structure of branching enzyme Y500A/D501A double mutant from Cyanothece sp. ATCC 51142
Descriptor: 1,4-alpha-glucan branching enzyme GlgB, GLYCEROL, MAGNESIUM ION
Authors:Suzuki, R, Suzuki, E.
Deposit date:2016-08-08
Release date:2017-08-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for substrate binding and catalysis of branching enzyme from Cyanothece sp. ATCC 51142
To be published
8J5E
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BU of 8j5e by Molmil
Crystal structure of kinase AbmG in complex with 4'-thiocytidine
Descriptor: 4-azanyl-1-[(2~{R},3~{R},4~{S},5~{R})-5-(hydroxymethyl)-3,4-bis(oxidanyl)thiolan-2-yl]pyrimidin-2-one, Deoxyadenosine/deoxycytidine kinase
Authors:Ushimaru, R, Mori, T, Liu, H.-w, Abe, I.
Deposit date:2023-04-22
Release date:2024-04-24
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of kinase AbmG in complex with 4'-thiocytidine
To Be Published
8J5F
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BU of 8j5f by Molmil
Crystal structure of kinase AbmG in complex with cytidine and ADP
Descriptor: 4-AMINO-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE, ADENOSINE-5'-DIPHOSPHATE, Deoxyadenosine/deoxycytidine kinase
Authors:Ushimaru, R, Mori, T, Liu, H.-w, Abe, I.
Deposit date:2023-04-22
Release date:2024-04-24
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of kinase AbmG in complex with cytidine and ADP
To Be Published
6Y3L
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BU of 6y3l by Molmil
NMR solution structure of the hazelnut allergen Cor a 1.0404
Descriptor: Major allergen variant Cor a 1.0404
Authors:Fuehrer, S, Kamenik, A.S, Zeindl, R, Nothegger, B, Hofer, F, Reider, N, Liedl, K.R, Tollinger, M.
Deposit date:2020-02-18
Release date:2021-02-17
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Inverse relation between structural flexibility and IgE reactivity of Cor a 1 hazelnut allergens.
Sci Rep, 11, 2021
7O6B
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BU of 7o6b by Molmil
Cooperation between the intrinsically disordered and ordered regions of Spt6 regulates nucleosome and Pol II CTD binding, and nucleosome assembly
Descriptor: Transcription elongation factor SPT6
Authors:Kasiliauskaite, A, Kubicek, K, Klumpler, T, Zanova, M, Zapletal, D, Novacek, J, Stefl, R.
Deposit date:2021-04-09
Release date:2022-04-20
Last modified:2022-06-22
Method:ELECTRON MICROSCOPY (3.88 Å)
Cite:Cooperation between intrinsically disordered and ordered regions of Spt6 regulates nucleosome and Pol II CTD binding, and nucleosome assembly.
Nucleic Acids Res., 50, 2022

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PDB entries from 2024-07-17

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