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PDB: 9 results

8X35
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Neryl diphosphate synthase from Solanum lycopersicum complexed with DMSAPP, IPP, and magnesium ion (form A)
Descriptor: 1,2-ETHANEDIOL, 3-METHYLBUT-3-ENYL TRIHYDROGEN DIPHOSPHATE, DI(HYDROXYETHYL)ETHER, ...
Authors:Imaizumi, R, Matsuura, H, Yanai, T, Takeshita, K, Misawa, S, Yamaguchi, H, Sakai, N, Miyagi-Inoue, Y, Suenaga-Hiromori, M, Kataoka, K, Nakayama, T, Yamamoto, M, Takahashi, S, Yamashita, S.
Deposit date:2023-11-12
Release date:2024-02-07
Last modified:2024-04-24
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Structural-Functional Correlations between Unique N-terminal Region and C-terminal Conserved Motif in Short-chain cis-Prenyltransferase from Tomato.
Chembiochem, 25, 2024
8X37
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Neryl diphosphate synthase from Solanum lycopersicum complexed with DMSAPP
Descriptor: DIMETHYLALLYL S-THIOLODIPHOSPHATE, MAGNESIUM ION, Neryl-diphosphate synthase 1
Authors:Imaizumi, R, Matsuura, H, Yanai, T, Takeshita, K, Misawa, S, Yamaguchi, H, Sakai, N, Miyagi-Inoue, Y, Suenaga-Hiromori, M, Kataoka, K, Nakayama, T, Yamamoto, M, Takahashi, S, Yamashita, S.
Deposit date:2023-11-12
Release date:2024-02-07
Last modified:2024-04-24
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Structural-Functional Correlations between Unique N-terminal Region and C-terminal Conserved Motif in Short-chain cis-Prenyltransferase from Tomato.
Chembiochem, 25, 2024
7BUR
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Chalcone synthase from Glycine max (L.) Merr (soybean) complexed with naringenin
Descriptor: CITRIC ACID, Chalcone synthase 1, NARINGENIN
Authors:Imaizumi, R, Mameda, R, Takeshita, K, Waki, T, Kubo, H, Sakai, N, Nakata, S, Takahashi, S, Kataoka, K, Yamamoto, M, Yamashita, S, Nakayama, T.
Deposit date:2020-04-08
Release date:2020-08-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Crystal structure of chalcone synthase, a key enzyme for isoflavonoid biosynthesis in soybean.
Proteins, 2020
7BUS
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Chalcone synthase from Glycine max (L.) Merr (soybean)
Descriptor: Chalcone synthase
Authors:Imaizumi, R, Mameda, R, Takeshita, K, Waki, T, Kubo, H, Sakai, N, Nakata, S, Takahashi, S, Kataoka, K, Yamamoto, M, Yamashita, S, Nakayama, T.
Deposit date:2020-04-08
Release date:2020-08-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:Crystal structure of chalcone synthase, a key enzyme for isoflavonoid biosynthesis in soybean.
Proteins, 2020
7VPC
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Neryl diphosphate synthase from Solanum lycopersicum
Descriptor: 1,2-ETHANEDIOL, D-MALATE, Neryl-diphosphate synthase 1
Authors:Imaizumi, R, Misawa, S, Takeshita, K, Sakai, N, Yamamoto, M, Kataoka, K, Nakayama, T, Takahashi, S, Yamashita, S.
Deposit date:2021-10-15
Release date:2022-05-18
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Structure-based engineering of a short-chain cis-prenyltransferase to biosynthesize nonnatural all-cis-polyisoprenoids: molecular mechanisms for primer substrate recognition and ultimate product chain-length determination.
Febs J., 289, 2022
8X36
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BU of 8x36 by Molmil
Neryl diphosphate synthase from Solanum lycopersicum complexed with DMSAPP, IPP, and magnesium ion (form B)
Descriptor: 3-METHYLBUT-3-ENYL TRIHYDROGEN DIPHOSPHATE, DIMETHYLALLYL S-THIOLODIPHOSPHATE, MAGNESIUM ION, ...
Authors:Imaizumi, R, Matsuura, H, Yanai, T, Takeshita, K, Misawa, S, Yamaguchi, H, Sakai, N, Miyagi-Inoue, Y, Suenaga-Hiromori, M, Kataoka, K, Nakayama, T, Yamamoto, M, Takahashi, S, Yamashita, S.
Deposit date:2023-11-12
Release date:2024-02-07
Last modified:2024-04-24
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Structural-Functional Correlations between Unique N-terminal Region and C-terminal Conserved Motif in Short-chain cis-Prenyltransferase from Tomato.
Chembiochem, 25, 2024
8J9F
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BU of 8j9f by Molmil
Structure of STG-hydrolyzing beta-glucosidase 1 (PSTG1)
Descriptor: Beta-glucosidase, GLYCEROL
Authors:Yanai, T, Imaizumi, R, Takahashi, Y, Katsumura, E, Yamamoto, M, Nakayama, T, Yamashita, S, Takeshita, K, Sakai, N, Matsuura, H.
Deposit date:2023-05-03
Release date:2024-04-10
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Structural insights into a bacterial beta-glucosidase that is capable of degrading sesaminol triglucoside to produce sesaminol
To be published
7F19
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BU of 7f19 by Molmil
Structure of the G304E mutant of CueO
Descriptor: Blue copper oxidase CueO, COPPER (II) ION, CU-O-CU LINKAGE, ...
Authors:Takata, S.T, Kawano, T.K, Nakata, S.N, Takado, K.T, Imaizumi, R.I, Sakai, N.S, Takeshita, K.T, Yamashita, S.Y, Sakurai, T.S, Kataoka, K.K.
Deposit date:2021-06-08
Release date:2022-06-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.773 Å)
Cite:Structure of the G304E mutant of CueO
To Be Published
7F0V
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Structure of the M305I mutant of CueO
Descriptor: Blue copper oxidase CueO, COPPER (II) ION, CU-O-CU LINKAGE, ...
Authors:Kawano, T.K, Takata, S.T, Sakai, N.S, Imaizumi, R.I, Nakata, S.N, Takeshita, K.T, Yamashita, S.Y, Sakurai, T.S, Kataoka, K.K.
Deposit date:2021-06-07
Release date:2022-06-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.494 Å)
Cite:Structure of the M305I mutant of CueO
To Be Published

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PDB entries from 2024-04-24

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