Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 27201 results

5EYT
DownloadVisualize
BU of 5eyt by Molmil
Crystal Structure of Adenylosuccinate Lyase from Schistosoma mansoni in complex with AMP
Descriptor: ADENOSINE MONOPHOSPHATE, Adenylosuccinate lyase
Authors:Romanello, L, Torini, J.R, Bird, L, Nettleship, J, Owens, R, Reddivari, Y, Brandao-Neto, J, Pereira, H.M.
Deposit date:2015-11-25
Release date:2016-11-30
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.3649 Å)
Cite:Structural and kinetic analysis of Schistosoma mansoni Adenylosuccinate Lyase (SmADSL).
Mol. Biochem. Parasitol., 214, 2017
8ORQ
DownloadVisualize
BU of 8orq by Molmil
Cryo-EM structure of Pyrococcus furiosus apo form RNA polymerase open clamp conformation
Descriptor: DNA-directed RNA polymerase subunit Rpo10, DNA-directed RNA polymerase subunit Rpo11, DNA-directed RNA polymerase subunit Rpo12, ...
Authors:Tarau, D.M, Reichelt, R, Heiss, F.B, Pilsl, M, Hausner, W, Engel, C, Grohmann, D.
Deposit date:2023-04-17
Release date:2024-04-24
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural basis of archaeal RNA polymerase transcription elongation and Spt4/5 recruitment.
Nucleic Acids Res., 52, 2024
8P2I
DownloadVisualize
BU of 8p2i by Molmil
Cryo-EM structure of Pyrococcus furiosus apo form RNA polymerase contracted clamp conformation with Spt4/5
Descriptor: DNA-directed RNA polymerase subunit Rpo10, DNA-directed RNA polymerase subunit Rpo11, DNA-directed RNA polymerase subunit Rpo12, ...
Authors:Tarau, D.M, Reichelt, R, Heiss, F.B, Pilsl, M, Hausner, W, Engel, C, Grohmann, D.
Deposit date:2023-05-16
Release date:2024-04-24
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural basis of archaeal RNA polymerase transcription elongation and Spt4/5 recruitment.
Nucleic Acids Res., 52, 2024
3HZF
DownloadVisualize
BU of 3hzf by Molmil
Structure of TR-alfa bound to selective thyromimetic GC-1 in C2 space group
Descriptor: Thyroid hormone receptor, alpha isoform 1 variant, {4-[4-hydroxy-3-(1-methylethyl)benzyl]-3,5-dimethylphenoxy}acetic acid
Authors:Aparicio, R, Bleicher, L, Polikarpov, I.
Deposit date:2009-06-23
Release date:2009-07-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis of GC-1 selectivity for thyroid hormone receptor isoforms.
Bmc Struct.Biol., 8, 2008
1NXU
DownloadVisualize
BU of 1nxu by Molmil
CRYSTAL STRUCTURE OF E. COLI HYPOTHETICAL OXIDOREDUCTASE YIAK NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET ER82.
Descriptor: Hypothetical oxidoreductase yiaK, SULFATE ION
Authors:Forouhar, F, Lee, I, Benach, J, Kulkarni, K, Xiao, R, Acton, T.B, Shastry, R, Rost, B, Montelione, G.T, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2003-02-11
Release date:2003-03-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A Novel NAD-binding Protein Revealed by the Crystal Structure of 2,3-Diketo-L-gulonate Reductase (YiaK).
J.Biol.Chem., 279, 2004
1OB0
DownloadVisualize
BU of 1ob0 by Molmil
Kinetic stabilization of Bacillus licheniformis alpha-amylase through introduction of hydrophobic residues at the surface
Descriptor: ALPHA-AMYLASE, CALCIUM ION, SODIUM ION
Authors:Machius, M, Declerck, N, Huber, R, Wiegand, G.
Deposit date:2003-01-21
Release date:2003-01-30
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Kinetic Stabilization of Bacillus Licheniformis Alpha-Amylase Through Introduction of Hydrophobic Residues at the Surface
J.Biol.Chem., 278, 2003
5HIU
DownloadVisualize
BU of 5hiu by Molmil
Structure of the TSC2 N-terminus
Descriptor: GTPase activator-like protein
Authors:Zech, R, Kiontke, S, Kummel, D.
Deposit date:2016-01-12
Release date:2016-08-10
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of the Tuberous Sclerosis Complex 2 (TSC2) N Terminus Provides Insight into Complex Assembly and Tuberous Sclerosis Pathogenesis.
J.Biol.Chem., 291, 2016
8OTV
DownloadVisualize
BU of 8otv by Molmil
Crystal structure of NUDT14 complexed with novel compound
Descriptor: 1-(1-methylpiperidin-4-yl)-3-(4-phenoxyphenyl)pyrazolo[3,4-d]pyrimidin-4-amine, DIMETHYL SULFOXIDE, MAGNESIUM ION, ...
Authors:Balikci, E, Feyerherm, C, Bradshaw, W, Seupel, R, Brennan, P.E, Bountra, C, von Delft, F, Huber, K, Structural Genomics Consortium (SGC)
Deposit date:2023-04-21
Release date:2024-05-01
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Unexpected Noncovalent Off-Target Activity of Clinical BTK Inhibitors Leads to Discovery of a Dual NUDT5/14 Antagonist.
J.Med.Chem., 67, 2024
8P1S
DownloadVisualize
BU of 8p1s by Molmil
Bifidobacterium asteroides alpha-L-fucosidase (TT1819) in complex with fucose.
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Bifidobacterium asteroides alpha-L-fucosidase (TT1819), ...
Authors:Owen, C.D, Penner, M, Gascuena, A.N, Wu, H, Hernando, P.J, Monaco, S, Le Gall, G, Gardner, R, Ndeh, D, Urbanowicz, P.A, Spencer, D.I.R, Walsh, M.A, Angulo, J, Juge, N.
Deposit date:2023-05-12
Release date:2024-05-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Exploring sequence, structure and function of microbial fucosidases from glycoside hydrolase GH29 family
To Be Published
8PKI
DownloadVisualize
BU of 8pki by Molmil
Cryo-EM structure of NR5A2-nucleosome complex SHL+5.5
Descriptor: DNA, Histone H2A, Histone H2B type 1-C/E/G, ...
Authors:Kobayashi, W, Sappler, A, Bollschweiler, D, Kummecke, M, Basquin, J, Arslantas, E, Ruangroengkulrith, S, Hornberger, R, Duderstadt, K, Tachibana, K.
Deposit date:2023-06-26
Release date:2024-02-28
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (2.58 Å)
Cite:Nucleosome-bound NR5A2 structure reveals pioneer factor mechanism by DNA minor groove anchor competition.
Nat.Struct.Mol.Biol., 31, 2024
8PKJ
DownloadVisualize
BU of 8pkj by Molmil
Cryo-EM structure of the nucleosome containing Nr5a2 motif at SHL+5.5
Descriptor: DNA, Histone H2A, Histone H2B, ...
Authors:Kobayashi, W, Sappler, A, Bollschweiler, D, Kummecke, M, Basquin, J, Arslantas, E, Ruangroengkulrith, S, Hornberger, R, Duderstadt, K, Tachibana, K.
Deposit date:2023-06-26
Release date:2024-02-28
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Nucleosome-bound NR5A2 structure reveals pioneer factor mechanism by DNA minor groove anchor competition.
Nat.Struct.Mol.Biol., 31, 2024
1ZXJ
DownloadVisualize
BU of 1zxj by Molmil
Crystal structure of the hypthetical Mycoplasma protein, MPN555
Descriptor: Hypothetical protein MG377 homolog
Authors:Schulze-Gahmen, U, Aono, S, Shengfeng, C, Yokota, H, Kim, R, Kim, S.-H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2005-06-08
Release date:2005-07-26
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of the hypothetical Mycoplasma protein MPN555 suggests a chaperone function.
Acta Crystallogr.,Sect.D, 61, 2005
5FO2
DownloadVisualize
BU of 5fo2 by Molmil
Structure of human transthyretin mutant A108I
Descriptor: TRANSTHYRETIN
Authors:Varejao, N, Santanna, R, Saraiva, M.J, Gallego, P, Ventura, S, Reverter, D.
Deposit date:2015-11-17
Release date:2016-11-30
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.449 Å)
Cite:Cavity filling mutations at the thyroxine-binding site dramatically increase transthyretin stability and prevent its aggregation.
Sci Rep, 7, 2017
8P1R
DownloadVisualize
BU of 8p1r by Molmil
Bifidobacterium asteroides alpha-L-fucosidase (TT1819) catalytic mutant.
Descriptor: 1,2-ETHANEDIOL, Bifidobacterium asteroides alpha-L-fucosidase (TT1819) catalytic mutant, MAGNESIUM ION
Authors:Owen, C.D, Penner, M, Gascuena, A.N, Wu, H, Hernando, P.J, Monaco, S, Le Gall, G, Gardner, R, Ndeh, D, Urbanowicz, P.A, Spencer, D.I.R, Walsh, M.A, Angulo, J, Juge, N.
Deposit date:2023-05-12
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.659 Å)
Cite:Exploring sequence, structure and function of microbial fucosidases from glycoside hydrolase GH29 family
To Be Published
8P1Z
DownloadVisualize
BU of 8p1z by Molmil
Arabidopsis thaliana cytosolic seryl-tRNA synthetase in addition of dithiothreitol (DTT)
Descriptor: Serine--tRNA ligase, cytoplasmic
Authors:Kekez, I, Soic, R, Rokov-Plavec, J, Matkovic-Calogovic, D.
Deposit date:2023-05-13
Release date:2024-05-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Arabidopsis thaliana cytosolic seryl-tRNA synthetase in addition of dithiothreitol (DTT)
To Be Published
8P19
DownloadVisualize
BU of 8p19 by Molmil
USP28 USP domain apo
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Ubiquitin carboxyl-terminal hydrolase 28
Authors:Sauer, F, Karal Nair, R, Kisker, C.
Deposit date:2023-05-11
Release date:2024-05-22
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:USP28 USP domain apo
To Be Published
8P14
DownloadVisualize
BU of 8p14 by Molmil
USP28 USP domain in complex with Vismodegib
Descriptor: 2-chloranyl-~{N}-(4-chloranyl-3-pyridin-2-yl-phenyl)-4-methylsulfonyl-benzamide, CHLORIDE ION, Ubiquitin carboxyl-terminal hydrolase 28
Authors:Sauer, F, Karal Nair, R, Kisker, C.
Deposit date:2023-05-11
Release date:2024-05-22
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:USP28 USP domain in complex with Vismodegib
To Be Published
8P1P
DownloadVisualize
BU of 8p1p by Molmil
USP28 in complex with AZ1
Descriptor: 2-[[5-bromanyl-2-[[4-fluoranyl-3-(trifluoromethyl)phenyl]methoxy]phenyl]methylamino]ethanol, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
Authors:Sauer, F, Karal-Nair, R, Kisker, C.
Deposit date:2023-05-12
Release date:2024-05-22
Method:X-RAY DIFFRACTION (2.76 Å)
Cite:USP28 in complex with AZ1
To Be Published
8P1Q
DownloadVisualize
BU of 8p1q by Molmil
USP28 in complex with FT206
Descriptor: 3-azanyl-N-[(2S)-6-[(1S,5R)-3,8-diazabicyclo[3.2.1]octan-3-yl]-1,2,3,4-tetrahydronaphthalen-2-yl]-6-methyl-thieno[2,3-b]pyridine-2-carboxamide, DIMETHYL SULFOXIDE, Ubiquitin carboxyl-terminal hydrolase 28
Authors:Sauer, F, Karal Nair, R, Kisker, C.
Deposit date:2023-05-12
Release date:2024-05-22
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:USP28 in complex with FT206
To Be Published
8P1Y
DownloadVisualize
BU of 8p1y by Molmil
Arabidopsis thaliana mutated variant C244S of seryl-tRNA synthetase
Descriptor: Serine--tRNA ligase, cytoplasmic
Authors:Kekez, I, Soic, R, Rokov-Plavec, J, Matkovic-Calogovic, D.
Deposit date:2023-05-13
Release date:2024-05-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Arabidopsis thaliana mutated variant C244S of seryl-tRNA synthetase
To Be Published
8P4T
DownloadVisualize
BU of 8p4t by Molmil
The spike complex of the Lujo Virus
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Glycoprotein, ...
Authors:Eilon-Ashkenazy, M, Diskin, R.
Deposit date:2023-05-23
Release date:2024-06-12
Method:ELECTRON MICROSCOPY (2.96 Å)
Cite:The spike complex of the Lujo Virus
To Be Published
8P2E
DownloadVisualize
BU of 8p2e by Molmil
Homotypic interacting B1 fab bound to Chondroitin Sulfate A
Descriptor: B1 fab heavy, B1 fab light
Authors:Raghavan, S.S.R, Dagil, R, Wang, K.T, Salanti, A.
Deposit date:2023-05-16
Release date:2024-06-05
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structure of homotypic B1 fabs bound to Chondroiting Sulfate A
To Be Published
8OX2
DownloadVisualize
BU of 8ox2 by Molmil
BRICHOS trimer
Descriptor: Pulmonary surfactant-associated protein C
Authors:Ghosh, D, Torres, F, Guentert, P, Riek, R.
Deposit date:2023-04-30
Release date:2024-06-26
Method:SOLUTION NMR
Cite:The inhibitory action of the chaperone BRICHOS against the alpha-Synuclein secondary nucleation pathway at near-atomic resolution
To Be Published
3J0G
DownloadVisualize
BU of 3j0g by Molmil
Homology model of E3 protein of Venezuelan Equine Encephalitis Virus TC-83 strain fitted with a cryo-EM map
Descriptor: E3 protein
Authors:Zhang, R, Hryc, C.F, Chiu, W.
Deposit date:2011-07-21
Release date:2011-08-24
Last modified:2023-07-26
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:4.4 angstrom cryo-EM structure of an enveloped alphavirus Venezuelan equine encephalitis virus.
Embo J., 30, 2011
3I6S
DownloadVisualize
BU of 3i6s by Molmil
Crystal Structure of the plant subtilisin-like protease SBT3
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Subtilisin-like protease, alpha-L-fucopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Rose, R, Ottmann, C.
Deposit date:2009-07-07
Release date:2010-01-19
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for Ca2+-independence and activation by homodimerization of tomato subtilase 3.
Proc.Natl.Acad.Sci.USA, 106, 2009

222624

건을2024-07-17부터공개중

PDB statisticsPDBj update infoContact PDBjnumon