Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 27479 件

8WCO
DownloadVisualize
BU of 8wco by Molmil
(S)-citramalyl-CoA lyase
分子名称: ACETYL COENZYME *A, Probable acyl-CoA lyase beta chain
著者Huang, Q, Bao, R.
登録日2023-09-13
公開日2024-05-15
最終更新日2024-07-24
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural and functional characterization of itaconyl-CoA hydratase and citramalyl-CoA lyase involved in itaconate metabolism of Pseudomonas aeruginosa.
Structure, 32, 2024
8W91
DownloadVisualize
BU of 8w91 by Molmil
Azumapecten Farreri homopolymeric ferritin mutant - H2KE exposed to H2O2 for 3 min
分子名称: FE (III) ION, Ferritin
著者Zhang, T, Jiao, R.
登録日2023-09-04
公開日2024-09-11
実験手法X-RAY DIFFRACTION (2.12 Å)
主引用文献Azumapecten Farreri homopolymeric ferritin mutant - H2KE exposed to H2O2 for 3 min
To Be Published
8YTJ
DownloadVisualize
BU of 8ytj by Molmil
Cryo-EM structure of enterovirus A71 mature virion
分子名称: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3, ...
著者Jiang, Y, Huang, Y, Zhu, R, Zheng, Q, Li, S, Xia, N.
登録日2024-03-26
公開日2024-09-04
実験手法ELECTRON MICROSCOPY (3.07 Å)
主引用文献Cryo-EM structure of enterovirus A71 mature virion in complex with Fab h1A6.2
To Be Published
8W92
DownloadVisualize
BU of 8w92 by Molmil
human H ferritin with 2 Fe(II)/subunit loading
分子名称: CALCIUM ION, FE (III) ION, Ferritin heavy chain
著者Zhang, T, Jiao, R.
登録日2023-09-04
公開日2024-09-11
実験手法X-RAY DIFFRACTION (2.12 Å)
主引用文献human H ferritin with 2 Fe(II)/subunit loading
To Be Published
9B3D
DownloadVisualize
BU of 9b3d by Molmil
mDia1 in the middle of F-actin
分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ...
著者Palmer, N.J, Barrie, K.R, Dominguez, R.
登録日2024-03-19
公開日2024-05-29
最終更新日2024-08-21
実験手法ELECTRON MICROSCOPY (3.41 Å)
主引用文献Mechanisms of actin filament severing and elongation by formins.
Nature, 632, 2024
9G7K
DownloadVisualize
BU of 9g7k by Molmil
Staphylococcus aureus MazF in complex with Nanobody 12
分子名称: CHLORIDE ION, Endoribonuclease MazF, Nanobody 12, ...
著者Zorzini, V, Haesaerts, S, Loris, R.
登録日2024-07-21
公開日2024-07-31
実験手法X-RAY DIFFRACTION (2.086874 Å)
主引用文献Nanobody-mediated activation and inhibition of Staphylococcus aureus MazF
To Be Published
9CI9
DownloadVisualize
BU of 9ci9 by Molmil
Crystal structure of human polymerase eta with incoming dCMPnPP nucleotide across threofuranosyl thymidine in DNA template at extension stage
分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]cytidine, DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*A)-3'), DNA (5'-D(*CP*AP*TP*GP*(TFT)P*TP*GP*AP*CP*GP*CP*T)-3'), ...
著者Tomar, R, Stone, M.P, Egli, M.
登録日2024-07-02
公開日2024-09-18
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献DNA Replication across alpha-l-(3'-2')-Threofuranosyl Nucleotides Mediated by Human DNA Polymerase eta.
Biochemistry, 63, 2024
1XD3
DownloadVisualize
BU of 1xd3 by Molmil
Crystal structure of UCHL3-UbVME complex
分子名称: MAGNESIUM ION, METHYL 4-AMINOBUTANOATE, UBC protein, ...
著者Misaghi, S, Galardy, P.J, Meester, W.J.N, Ovaa, H, Ploegh, H.L, Gaudet, R.
登録日2004-09-03
公開日2004-11-23
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Structure of the Ubiquitin Hydrolase UCH-L3 Complexed with a Suicide Substrate
J.Biol.Chem., 280, 2005
9CJ9
DownloadVisualize
BU of 9cj9 by Molmil
Crystal structure of human polymerase eta with incoming dAMPnPP nucleotide opposite O4-methyl threofuranosyl thymidine in DNA template at insertion stage
分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosine, DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*T)-3'), DNA (5'-D(*CP*AP*TP*(TFT)P*AP*TP*GP*AP*CP*GP*CP*T)-3'), ...
著者Tomar, R, Stone, M.P, Egli, M.
登録日2024-07-05
公開日2024-09-18
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.98 Å)
主引用文献DNA Replication across alpha-l-(3'-2')-Threofuranosyl Nucleotides Mediated by Human DNA Polymerase eta.
Biochemistry, 63, 2024
9CHW
DownloadVisualize
BU of 9chw by Molmil
Crystal structure of human polymerase eta with incoming dAMPnPP nucleotide opposite threofuranosyl thymidine in DNA template
分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosine, DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*T)-3'), DNA (5'-D(*CP*AP*TP*(TFT)P*AP*TP*GP*AP*CP*GP*CP*T)-3'), ...
著者Tomar, R, Stone, M.P, Egli, M.
登録日2024-07-02
公開日2024-09-18
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.16 Å)
主引用文献DNA Replication across alpha-l-(3'-2')-Threofuranosyl Nucleotides Mediated by Human DNA Polymerase eta.
Biochemistry, 63, 2024
9B3T
DownloadVisualize
BU of 9b3t by Molmil
Octameric prenyltransferase domain of linkerless Fusicoccadiene synthase with C2 symmetry without associated cyclase domains
分子名称: Fusicoccadiene synthase
著者Wenger, E.S, Schultz, K, Marmorstein, R, Christianson, D.W.
登録日2024-03-20
公開日2024-09-25
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (3.53 Å)
主引用文献Engineering substrate channeling in a bifunctional terpene synthase.
Proc.Natl.Acad.Sci.USA, 121, 2024
5ICF
DownloadVisualize
BU of 5icf by Molmil
Crystal structure of (S)-norcoclaurine 6-O-methyltransferase with S-adenosyl-L-homocysteine and sanguinarine
分子名称: (S)-norcoclaurine 6-O-methyltransferase, 1,2-ETHANEDIOL, 13-methyl[1,3]benzodioxolo[5,6-c][1,3]dioxolo[4,5-i]phenanthridin-13-ium, ...
著者Robin, A.Y, Graindorge, M, Giustini, C, Dumas, R, Matringe, M.
登録日2016-02-23
公開日2016-06-08
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of norcoclaurine-6-O-methyltransferase, a key rate-limiting step in the synthesis of benzylisoquinoline alkaloids.
Plant J., 87, 2016
8WUT
DownloadVisualize
BU of 8wut by Molmil
SpCas9-MMLV RT-pegRNA-target DNA complex (initiation)
分子名称: CRISPR-associated endonuclease Cas9/Csn1, DNA (5'-D(*TP*GP*AP*TP*GP*GP*CP*AP*GP*AP*GP*TP*AP*CP*TP*AP*G)-3'), DNA (51-MER), ...
著者Shuto, Y, Nakagawa, R, Hoki, M, Omura, S.N, Hirano, H, Itoh, Y, Nureki, O.
登録日2023-10-21
公開日2024-06-05
最終更新日2024-09-11
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural basis for pegRNA-guided reverse transcription by a prime editor.
Nature, 631, 2024
8XFD
DownloadVisualize
BU of 8xfd by Molmil
Crystal structure of pyruvate kinase tetramer in complex with allosteric activator, Mitapivat (MTPV, AG-348)
分子名称: 1,6-di-O-phosphono-beta-D-fructofuranose, Isoform L-type of Pyruvate kinase PKLR, MAGNESIUM ION, ...
著者Sun, R, Achour, A.
登録日2023-12-13
公開日2024-05-15
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献High Resolution Crystal Structure of the Pyruvate Kinase Tetramer in Complex with the Allosteric Activator Mitapivat/AG-348
Crystals, 2024
5IKC
DownloadVisualize
BU of 5ikc by Molmil
X-RAY STRUCTURE OF THE N-TERMINAL DOMAIN OF HUMAN DOUBLECORTIN in complex with FAB
分子名称: CHLORIDE ION, Ighg protein, MAb 6H10 light chain, ...
著者Ruf, A, Stihle, M, Benz, J, Thoma, R, Rudolph, M.G.
登録日2016-03-03
公開日2016-05-18
最終更新日2020-03-11
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献Crystal Structures of the Human Doublecortin C- and N-terminal Domains in Complex with Specific Antibodies.
J.Biol.Chem., 291, 2016
9CUZ
DownloadVisualize
BU of 9cuz by Molmil
Bufavirus 1 complexed with 6SLN
分子名称: N-acetyl-alpha-neuraminic acid, VP1
著者Gulkis, M.C, McKenna, R, Bennett, A.D.
登録日2024-07-27
公開日2024-09-18
実験手法ELECTRON MICROSCOPY (2.16 Å)
主引用文献Structural Characterization of Human Bufavirus 1: Receptor Binding and Endosomal pH-Induced Changes.
Viruses, 16, 2024
8W14
DownloadVisualize
BU of 8w14 by Molmil
Rhodanese-like domain from Acinetobacter baumannii 118362
分子名称: GLYCEROL, Rhodanese, SULFATE ION
著者Benisch, R, Giessen, T.W.
登録日2024-02-15
公開日2024-09-25
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural and biochemical characterization of an encapsulin-associated rhodanese from Acinetobacter baumannii.
Protein Sci., 33, 2024
8XEG
DownloadVisualize
BU of 8xeg by Molmil
Cryo-EM structure of Adeno-associated Virus 9P31 in 1.76 angstrom.
分子名称: Capsid protein VP1
著者Zhang, R, Liu, Y, Lou, Z.
登録日2023-12-12
公開日2024-01-24
最終更新日2024-02-28
実験手法ELECTRON MICROSCOPY (1.76 Å)
主引用文献Structural basis of the recognition of adeno-associated virus by the neurological system-related receptor carbonic anhydrase IV.
Plos Pathog., 20, 2024
5ICV
DownloadVisualize
BU of 5icv by Molmil
Crystal structure of human NatF (hNaa60) bound to a bisubstrate analogue
分子名称: MET-LYS-ALA-VAL-LIG, N-alpha-acetyltransferase 60, [5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonooxy)furan-2-yl]methyl (3R)-4-{[3-({(E)-2-[(2,2-dihydroxyethyl)sulfanyl]ethenyl}amino)-3-oxopropyl]amino}-3-hydroxy-2,2-dimethyl-4-oxobutyl dihydrogen diphosphate
著者Stove, S.I, Magin, R.S, Marmorstein, R, Arnesen, T.
登録日2016-02-23
公開日2016-06-22
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Crystal Structure of the Golgi-Associated Human N alpha-Acetyltransferase 60 Reveals the Molecular Determinants for Substrate-Specific Acetylation.
Structure, 24, 2016
9BVU
DownloadVisualize
BU of 9bvu by Molmil
NMR structure of TLP-2 in solution
分子名称: Temporin-1Tl
著者Jia, R, McShan, A.C.
登録日2024-05-20
公開日2024-06-05
実験手法SOLUTION NMR
主引用文献Design and Development of Temporin L Analogues to Inhibit the Main Protease of SARS-CoV-2
To Be Published
9C4O
DownloadVisualize
BU of 9c4o by Molmil
Cryo-EM structure of PqqU with ligand PQQ
分子名称: CALCIUM ION, PYRROLOQUINOLINE QUINONE, Pyrroloquinoline quinone transporter
著者Munder, F, Venugopal, H, Grinter, R.
登録日2024-06-04
公開日2024-06-19
実験手法ELECTRON MICROSCOPY (1.99 Å)
主引用文献High-affinity PQQ import is widespread in Gram-negative bacteria.
To Be Published
8ZUH
DownloadVisualize
BU of 8zuh by Molmil
Crystal structure of bovine Fbs2/Skp1/Man3GlcNAc2 complex
分子名称: F-box only protein 6, S-phase kinase-associated protein 1, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Satoh, T, Mizushima, T, Yagi, H, Kato, R, Kato, K.
登録日2024-06-09
公開日2024-09-04
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural basis of sugar recognition by SCF FBS2 ubiquitin ligase involved in NGLY1 deficiency.
Febs Lett., 598, 2024
8X53
DownloadVisualize
BU of 8x53 by Molmil
Cryo-EM structure of human gamma-secretase in complex with Abeta46
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Guo, X, Yan, C, Lei, J, Zhou, R, Shi, Y.
登録日2023-11-16
公開日2024-05-29
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Molecular mechanism of substrate recognition and cleavage by human gamma-secretase.
Science, 384, 2024
8W93
DownloadVisualize
BU of 8w93 by Molmil
Azumapecten Farreri homopolymeric ferritin (ApF) mutant-H2KE
分子名称: FE (III) ION, Ferritin
著者Zhang, T, Jiao, R.
登録日2023-09-04
公開日2024-09-11
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Azumapecten Farreri homopolymeric ferritin (ApF) mutant-H2KE
To Be Published
9C6V
DownloadVisualize
BU of 9c6v by Molmil
Crystal Structure of a single chain trimer composed of HLA-B*39:06 Y84C variant, beta-2microglobulin, and NRVMLPKAA peptide from NLRP2 (1 molecule/asymmetric unit)
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, GLYCEROL, ...
著者Sharma, R, Amdare, N.P, Celikgil, A, Garforth, S.J, DiLorenzo, T.P, Almo, S.C, Ghosh, A.
登録日2024-06-09
公開日2024-09-04
最終更新日2024-10-02
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural and biochemical analysis of highly similar HLA-B allotypes differentially associated with type 1 diabetes.
J.Biol.Chem., 300, 2024

226262

件を2024-10-16に公開中

PDB statisticsPDBj update infoContact PDBjnumon