Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 27265 results

5ZWT
DownloadVisualize
BU of 5zwt by Molmil
Crystal structure of the S37A mutant of apo-acyl carrier protein from Leishmania major
Descriptor: Acyl carrier protein
Authors:Sharma, B, Arya, R, Kundu, S, Makde, R.D.
Deposit date:2018-05-16
Release date:2019-01-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:A conformational switch from a closed apo- to an open holo-form equips the acyl carrier protein for acyl chain accommodation.
Biochim Biophys Acta Proteins Proteom, 1867, 2018
6I06
DownloadVisualize
BU of 6i06 by Molmil
Crystal structure of psychrophilic phosphoglycerate kinase from Pseudomonas TACII18
Descriptor: Phosphoglycerate kinase
Authors:Mandelman, D, Haser, R, Aghajari, N.
Deposit date:2018-10-25
Release date:2019-06-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural determinants increasing flexibility confer cold adaptation in psychrophilic phosphoglycerate kinase.
Extremophiles, 23, 2019
6AA3
DownloadVisualize
BU of 6aa3 by Molmil
Crystal structure of MTH1 in apo form (cocktail No. 1)
Descriptor: 7,8-dihydro-8-oxoguanine triphosphatase, SULFATE ION, ZINC ION
Authors:Yokoyama, T, Kitakami, R, Mizuguchi, M.
Deposit date:2018-07-17
Release date:2019-03-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:Discovery of a new class of MTH1 inhibitor by X-ray crystallographic screening.
Eur J Med Chem, 167, 2019
3UNJ
DownloadVisualize
BU of 3unj by Molmil
CDK2 in complex with inhibitor YL1-038-31
Descriptor: 4-{[4-(phenylamino)pyrimidin-2-yl]amino}benzoic acid, Cyclin-dependent kinase 2, PHOSPHATE ION
Authors:Zhu, J.-Y, Martin, M.P, Alam, R, Schonbrunn, E.
Deposit date:2011-11-15
Release date:2012-01-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.9001 Å)
Cite:A Novel Mechanism by Which Small Molecule Inhibitors Induce the DFG Flip in Aurora A.
Acs Chem.Biol., 7, 2012
5ZST
DownloadVisualize
BU of 5zst by Molmil
NifS from Hydrogenimonas thermopile in a persulfurated form
Descriptor: Cysteine desulfurase
Authors:Nakamura, R, Fujishiro, T, Takahashi, Y.
Deposit date:2018-04-29
Release date:2019-05-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Snapshots of PLP-substrate and PLP-product external aldimines as intermediates in two types of cysteine desulfurase enzymes.
Febs J., 287, 2020
5ZWS
DownloadVisualize
BU of 5zws by Molmil
Crystal structure of apo-acyl carrier protein from Leishmania major
Descriptor: Acyl carrier protein
Authors:Arya, R, Sharma, B, Makde, R.D, Kundu, S.
Deposit date:2018-05-16
Release date:2019-01-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:A conformational switch from a closed apo- to an open holo-form equips the acyl carrier protein for acyl chain accommodation.
Biochim Biophys Acta Proteins Proteom, 1867, 2018
5ZSZ
DownloadVisualize
BU of 5zsz by Molmil
Catechol 2,3-dioxygenase (C23O64) from Diaphorobacter sp DS2
Descriptor: CALCIUM ION, Catechol 2,3-dioxygenase, Extradiol ring cleavage protein, ...
Authors:Mishra, K, Arya, C.K, Subramanian, R, Ramanathan, G.
Deposit date:2018-04-30
Release date:2019-05-22
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Catechol 2,3-dioxygenase (C23O64) from Diaphorobacter sp DS2
To Be Published
5ZSQ
DownloadVisualize
BU of 5zsq by Molmil
NifS from Hydrogenimonas thermophila, soaked with L-cysteine for 4 min
Descriptor: Cysteine desulfurase
Authors:Nakamura, R, Fujishiro, T, Takahashi, Y.
Deposit date:2018-04-29
Release date:2019-05-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.211 Å)
Cite:X-ray snapshots of two classes of cysteine desulfurase enzymes NifS and SufS
to be published
3ILZ
DownloadVisualize
BU of 3ilz by Molmil
Structure of TR-alfa bound to selective thyromimetic GC-1 in P212121 space group
Descriptor: Thyroid hormone receptor, alpha isoform 1 variant, {4-[4-hydroxy-3-(1-methylethyl)benzyl]-3,5-dimethylphenoxy}acetic acid
Authors:Aparicio, R, Polikarpov, L, Bleicher, L.
Deposit date:2009-08-07
Release date:2010-04-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural basis of GC-1 selectivity for thyroid hormone receptor isoforms.
Bmc Struct.Biol., 8, 2008
6A9O
DownloadVisualize
BU of 6a9o by Molmil
Rational discovery of a SOD1 tryptophan oxidation inhibitor with therapeutic potential for amyotrophic lateral sclerosis
Descriptor: 2'-[(6-oxo-5,6-dihydrophenanthridin-3-yl)carbamoyl][1,1'-biphenyl]-2-carboxylic acid, DIMETHYL SULFOXIDE, Dihydrogen tetrasulfide, ...
Authors:Manjula, R, Padmanabhan, B.
Deposit date:2018-07-14
Release date:2019-07-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Rational discovery of a SOD1 tryptophan oxidation inhibitor with therapeutic potential for amyotrophic lateral sclerosis.
J.Biomol.Struct.Dyn., 37, 2019
6AAV
DownloadVisualize
BU of 6aav by Molmil
Crystal structure of alpha-glucosyl transfer enzyme, XgtA at 1.72 angstrom resolution
Descriptor: Alpha-glucosyltransferase
Authors:Kurumizaka, H, Arimura, Y, Kirimura, K, Watanabe, R.
Deposit date:2018-07-19
Release date:2019-07-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Crystal structure of alpha-glucosyl transfer enzyme XgtA from Xanthomonas campestris WU-9701.
Biochem.Biophys.Res.Commun., 526, 2020
6ACU
DownloadVisualize
BU of 6acu by Molmil
The structure of CVA10 virus mature virion
Descriptor: SPHINGOSINE, VP1, VP2, ...
Authors:Cui, Y.X, Zheng, Q.B, Zhu, R, Xu, L.F, Li, S.W, Yan, X.D, Zhou, Z.H, Cheng, T.
Deposit date:2018-07-27
Release date:2018-11-21
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Discovery and structural characterization of a therapeutic antibody against coxsackievirus A10.
Sci Adv, 4, 2018
6ADG
DownloadVisualize
BU of 6adg by Molmil
Crystal Structures of IDH1 R132H in complex with AG-881
Descriptor: 6-(6-chloropyridin-2-yl)-N2,N4-bis[(2R)-1,1,1-trifluoropropan-2-yl]-1,3,5-triazine-2,4-diamine, Isocitrate dehydrogenase [NADP] cytoplasmic, MAGNESIUM ION, ...
Authors:Ma, R, Yun, C.H.
Deposit date:2018-08-01
Release date:2018-09-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structures of pan-IDH inhibitor AG-881 in complex with mutant human IDH1 and IDH2
Biochem. Biophys. Res. Commun., 503, 2018
6A8Z
DownloadVisualize
BU of 6a8z by Molmil
Crystal structure of M1 zinc metallopeptidase from Deinococcus radiodurans
Descriptor: SODIUM ION, TYROSINE, ZINC ION, ...
Authors:Agrawal, R, Kumar, A, Makde, R.D.
Deposit date:2018-07-11
Release date:2019-07-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.045 Å)
Cite:Two-domain aminopeptidase of M1 family: Structural features for substrate binding and gating in absence of C-terminal domain.
J.Struct.Biol., 208, 2019
5ZVN
DownloadVisualize
BU of 5zvn by Molmil
Structure of [beta Glc-T9,K7]indolicidin, a glycosylated analogue of indolicidin
Descriptor: beta-D-glucopyranose, glycosylated analogue of Indolicidin
Authors:Dwivedi, R, Aggarwal, P, Kaur, K.J, Bhavesh, N.S.
Deposit date:2018-05-11
Release date:2019-06-19
Last modified:2020-07-29
Method:SOLUTION NMR
Cite:Design of therapeutically improved analogue of the antimicrobial peptide, indolicidin, using a glycosylation strategy.
Amino Acids, 51, 2019
6I9N
DownloadVisualize
BU of 6i9n by Molmil
JmjC domain-containing protein 5 (JMJD5) in complex with Mn and L-2-hydroxyglutarate
Descriptor: (2S)-2-HYDROXYPENTANEDIOIC ACID, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, ...
Authors:Chowdhury, R, Islam, M.S, Schofield, C.J.
Deposit date:2018-11-24
Release date:2019-12-04
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.361 Å)
Cite:Structural analysis of the 2-oxoglutarate binding site of the circadian rhythm linked oxygenase JMJD5.
Sci Rep, 12, 2022
5ZZN
DownloadVisualize
BU of 5zzn by Molmil
Crystal structure of photosystem II from an SQDG-deficient mutant of Thermosynechococcus elongatus
Descriptor: (3R)-beta,beta-caroten-3-ol, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
Authors:Nakajima, Y, Umena, Y, Nagao, R, Endo, K, Kobayashi, K, Akita, F, Suga, M, Wada, H, Noguchi, T, Shen, J.R.
Deposit date:2018-06-03
Release date:2018-08-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Thylakoid membrane lipid sulfoquinovosyl-diacylglycerol (SQDG) is required for full functioning of photosystem II inThermosynechococcus elongatus.
J. Biol. Chem., 293, 2018
3IFA
DownloadVisualize
BU of 3ifa by Molmil
Human muscle fructose-1,6-bisphosphatase E69Q mutant in complex with AMP
Descriptor: ADENOSINE MONOPHOSPHATE, Fructose-1,6-bisphosphatase isozyme 2, GLYCEROL, ...
Authors:Kolodziejczyk, R, Zarzycki, M, Jaskolski, M, Dzugaj, A.
Deposit date:2009-07-24
Release date:2010-08-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Structure of E69Q mutant of human muscle fructose-1,6-bisphosphatase
Acta Crystallogr.,Sect.D, 67, 2011
6A2Q
DownloadVisualize
BU of 6a2q by Molmil
Mycobacterium tuberculosis LexA C-domain I
Descriptor: GLYCEROL, LexA repressor
Authors:Chandran, A.V, Srikalaivani, R, Paul, A, Vijayan, M.
Deposit date:2018-06-12
Release date:2019-01-23
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Biochemical characterization of Mycobacterium tuberculosis LexA and structural studies of its C-terminal segment.
Acta Crystallogr D Struct Biol, 75, 2019
6I9M
DownloadVisualize
BU of 6i9m by Molmil
JmjC domain-containing protein 5 (JMJD5) in complex with Mn and R-2-hydroxyglutarate
Descriptor: (2R)-2-hydroxypentanedioic acid, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, ...
Authors:Chowdhury, R, Islam, M.S, Schofield, C.J.
Deposit date:2018-11-23
Release date:2019-12-04
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural analysis of the 2-oxoglutarate binding site of the circadian rhythm linked oxygenase JMJD5.
Sci Rep, 12, 2022
6A2R
DownloadVisualize
BU of 6a2r by Molmil
Mycobacterium tuberculosis LexA C-domain II
Descriptor: DI(HYDROXYETHYL)ETHER, LexA repressor
Authors:Chandran, A.V, Srikalaivani, R, Paul, A, Vijayan, M.
Deposit date:2018-06-12
Release date:2019-01-23
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Biochemical characterization of Mycobacterium tuberculosis LexA and structural studies of its C-terminal segment.
Acta Crystallogr D Struct Biol, 75, 2019
1AQM
DownloadVisualize
BU of 1aqm by Molmil
ALPHA-AMYLASE FROM ALTEROMONAS HALOPLANCTIS COMPLEXED WITH TRIS
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ALPHA-AMYLASE, CALCIUM ION, ...
Authors:Aghajari, N, Haser, R.
Deposit date:1997-07-31
Release date:1999-03-02
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structures of the psychrophilic alpha-amylase from Alteromonas haloplanctis in its native form and complexed with an inhibitor.
Protein Sci., 7, 1998
1AQX
DownloadVisualize
BU of 1aqx by Molmil
GLUTATHIONE S-TRANSFERASE IN COMPLEX WITH MEISENHEIMER COMPLEX
Descriptor: 1-(S-GLUTATHIONYL)-2,4,6-TRINITROCYCLOHEXA-2,5-DIENE, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLUTATHIONE S-TRANSFERASE
Authors:Prade, L, Huber, R, Manoharan, T.H, Fahl, W.E, Reuter, W.
Deposit date:1997-08-03
Release date:1998-03-18
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures of class pi glutathione S-transferase from human placenta in complex with substrate, transition-state analogue and inhibitor.
Structure, 5, 1997
6A8V
DownloadVisualize
BU of 6a8v by Molmil
PhoQ sensor domain (D179R mutant): analysis of internal cavity
Descriptor: Sensor protein PhoQ
Authors:Yoshitani, K, Ishii, E, Taniguchi, K, Sugimoto, H, Shiro, Y, Mori, H, Akiyama, Y, Kato, A, Utsumi, R, Eguchi, Y.
Deposit date:2018-07-10
Release date:2019-01-30
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Identification of an internal cavity in the PhoQ sensor domain for PhoQ activity and SafA-mediated control.
Biosci. Biotechnol. Biochem., 83, 2019
6A6X
DownloadVisualize
BU of 6a6x by Molmil
The crystal structure of the Mtb MazE-MazF-mt9 complex
Descriptor: Antitoxin MazE7, Probable endoribonuclease MazF7, SULFATE ION
Authors:Xie, W, Chen, R, Tu, J.
Deposit date:2018-06-29
Release date:2019-07-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural and Biochemical Characterization of the Cognate and Heterologous Interactions of the MazEF-mt9 TA System.
Acs Infect Dis., 5, 2019

223790

PDB entries from 2024-08-14

PDB statisticsPDBj update infoContact PDBjnumon