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PDB: 42 results

5MFR
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BU of 5mfr by Molmil
The crystal structure of E. coli Aminopeptidase N in complex with 7-amino-5,7,8,9-tetrahydrobenzocyclohepten-6-one
Descriptor: Aminopeptidase N, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
Authors:Peng, G, Olieric, V, McEwen, A.G, Schmitt, C, Albrecht, S, Cavarelli, J, Tarnus, C.
Deposit date:2016-11-18
Release date:2017-04-19
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Insight into the remarkable affinity and selectivity of the aminobenzosuberone scaffold for the M1 aminopeptidases family based on structure analysis.
Proteins, 85, 2017
5MFT
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BU of 5mft by Molmil
The crystal structure of E. coli Aminopeptidase N in complex with 7-amino-1-bromo-4-phenyl-5,7,8,9-tetrahydrobenzocyclohepten-6-one
Descriptor: Aminopeptidase N, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
Authors:Peng, G, Olieric, V, McEwen, A.G, Schmitt, C, Albrecht, S, Cavarelli, J, Tarnus, C.
Deposit date:2016-11-18
Release date:2017-04-19
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Insight into the remarkable affinity and selectivity of the aminobenzosuberone scaffold for the M1 aminopeptidases family based on structure analysis.
Proteins, 85, 2017
5MFS
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BU of 5mfs by Molmil
The crystal structure of E. coli Aminopeptidase N in complex with 7-amino-4-phenyl-5,7,8,9-tetrahydrobenzocyclohepten-6-one
Descriptor: Aminopeptidase N, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
Authors:Peng, G, Olieric, V, McEwen, A.G, Schmitt, C, Albrecht, S, Cavarelli, J, Tarnus, C.
Deposit date:2016-11-18
Release date:2017-04-19
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Insight into the remarkable affinity and selectivity of the aminobenzosuberone scaffold for the M1 aminopeptidases family based on structure analysis.
Proteins, 85, 2017
5VST
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BU of 5vst by Molmil
Crystal structure of murine CEACAM1b
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Biliary glycoprotein
Authors:Peng, G, Yang, Y, Pasquarella, J.R, Xu, L, Qian, Z, Holmes, K.V, Li, F.
Deposit date:2017-05-12
Release date:2017-05-24
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Molecular mechanism for coronavirus-driven evolution of mouse receptor
J. Biol. Chem., 292, 2017
3KBH
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BU of 3kbh by Molmil
Crystal structure of NL63 respiratory coronavirus receptor-binding domain complexed with its human receptor
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, Spike glycoprotein
Authors:Wu, K, Li, W, Peng, G, Li, F.
Deposit date:2009-10-20
Release date:2009-12-15
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.31 Å)
Cite:Crystal structure of NL63 respiratory coronavirus receptor-binding domain complexed with its human receptor.
Proc.Natl.Acad.Sci.USA, 106, 2009
4NAQ
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BU of 4naq by Molmil
Crystal structure of porcine aminopeptidase-N complexed with poly-alanine
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Aminopeptidase N, ...
Authors:Chen, L, Lin, Y.L, Peng, G, Li, F.
Deposit date:2013-10-22
Release date:2013-12-04
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for multifunctional roles of mammalian aminopeptidase N.
Proc.Natl.Acad.Sci.USA, 109, 2012
1GM0
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BU of 1gm0 by Molmil
A Form of the Pheromone-Binding Protein from Bombyx mori
Descriptor: PHEROMONE-BINDING PROTEIN
Authors:Horst, R, Damberger, F, Guntert, P, Luginbuhl, P, Nikonova, L, Peng, G, Leal, W.S, Wuthrich, K.
Deposit date:2001-09-05
Release date:2001-11-30
Last modified:2024-10-23
Method:SOLUTION NMR
Cite:NMR Structure Reveals Novel Intramolecular Regulation Mechanism for Pheromone-Binding and Release
Proc.Natl.Acad.Sci.USA, 98, 2001
5OVQ
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BU of 5ovq by Molmil
Crystal Structure of the peroxiredoxin (AhpC2) from the Hyperthermophilic bacteria Aquifex aeolicus VF
Descriptor: Peroxiredoxin, UNKNOWN LIGAND
Authors:Warkentin, E, Peng, G.
Deposit date:2017-08-29
Release date:2018-10-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural properties of the peroxiredoxin AhpC2 from the hyperthermophilic eubacterium Aquifex aeolicus.
Biochim Biophys Acta Gen Subj, 1862, 2018
7Q5Y
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BU of 7q5y by Molmil
Structure of NADH:ubichinon oxidoreductase (complex I) of the hyperthermophilic eubacterium Aquifex aeolicus
Descriptor: FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, IRON/SULFUR CLUSTER, ...
Authors:Warkentin, E, Ermler, U, Peng, G.
Deposit date:2021-11-05
Release date:2022-11-16
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of NADH:ubichinon oxidoreductase (complex I) of the hyperthermophilic eubacterium Aquifex aeolicus
To Be Published
5MV2
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Crystal structure of the E protein of the Japanese encephalitis live attenuated vaccine virus
Descriptor: E protein
Authors:Liu, X, Zhao, X, Na, R, Li, L, Warkentin, E, Witt, J, Lu, X, Wei, Y, Peng, G, Li, Y, Wang, J.
Deposit date:2017-01-14
Release date:2018-05-23
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The structure differences of Japanese encephalitis virus SA14 and SA14-14-2 E proteins elucidate the virulence attenuation mechanism.
Protein Cell, 10, 2019
4U78
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BU of 4u78 by Molmil
Octameric RNA duplex soaked in copper(II)chloride
Descriptor: CALCIUM ION, COPPER (II) ION, RNA (5'-R(*UP*CP*GP*UP*AP*CP*GP*A)-3')
Authors:Schaffer, M.F, Spingler, B, Schnabl, J, Peng, G, Olieric, V, Sigel, R.K.O.
Deposit date:2014-07-30
Release date:2015-08-26
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.501 Å)
Cite:The X-ray Structures of Six Octameric RNA Duplexes in the Presence of Different Di- and Trivalent Cations.
Int J Mol Sci, 17, 2016
4U47
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BU of 4u47 by Molmil
Octameric RNA duplex soaked in terbium(III)chloride
Descriptor: RNA (5'-R(*UP*CP*GP*UP*AP*CP*GP*A)-3'), TERBIUM(III) ION
Authors:Schaffer, M.F, Spingler, B, Schnabl, J, Peng, G, Olieric, V, Sigel, R.K.O.
Deposit date:2014-07-23
Release date:2015-08-05
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.952 Å)
Cite:The X-ray Structures of Six Octameric RNA Duplexes in the Presence of Different Di- and Trivalent Cations.
Int J Mol Sci, 17, 2016
4U3P
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BU of 4u3p by Molmil
Octameric RNA duplex co-crystallized with strontium(II)chloride
Descriptor: RNA (5'-R(*UP*CP*GP*UP*AP*CP*GP*A)-3'), STRONTIUM ION
Authors:Schaffer, M.F, Spingler, B, Schnabl, J, Peng, G, Olieric, V, Sigel, R.K.O.
Deposit date:2014-07-22
Release date:2015-07-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.866 Å)
Cite:The X-ray Structures of Six Octameric RNA Duplexes in the Presence of Different Di- and Trivalent Cations.
Int J Mol Sci, 17, 2016
4U3R
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BU of 4u3r by Molmil
Octameric RNA duplex co-crystallized with cobalt(II)chloride
Descriptor: COBALT (II) ION, RNA (5'-R(*UP*CP*GP*UP*AP*CP*GP*A)-3')
Authors:Schaffer, M.F, Spingler, B, Schnabl, J, Peng, G, Olieric, V, Sigel, R.K.O.
Deposit date:2014-07-22
Release date:2015-07-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.701 Å)
Cite:The X-ray Structures of Six Octameric RNA Duplexes in the Presence of Different Di- and Trivalent Cations.
Int J Mol Sci, 17, 2016
4U3L
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BU of 4u3l by Molmil
octameric RNA duplex co-crystallized in calcium(II)chloride
Descriptor: CALCIUM ION, RNA (5'-R(*UP*CP*GP*UP*AP*CP*GP*A)-3')
Authors:Schaffer, M.F, Spingler, B, Schnabl, J, Peng, G, Olieric, V, Sigel, R.K.O.
Deposit date:2014-07-22
Release date:2015-07-29
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.482 Å)
Cite:The X-ray Structures of Six Octameric RNA Duplexes in the Presence of Different Di- and Trivalent Cations.
Int J Mol Sci, 17, 2016
5HIY
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BU of 5hiy by Molmil
Crystal structure of PEDV NSP9 Mutant-C59A
Descriptor: Non-structural protein 9
Authors:Deng, F, Peng, G.
Deposit date:2016-01-12
Release date:2017-01-25
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Dimerization of Coronavirus nsp9 with Diverse Modes Enhances Its Nucleic Acid Binding Affinity.
J.Virol., 92, 2018
4U3O
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BU of 4u3o by Molmil
Octameric RNA duplex soaked in manganese(II)chloride
Descriptor: MANGANESE (II) ION, RNA (5'-R(*UP*CP*GP*UP*AP*CP*GP*A)-3')
Authors:Schaffer, M.F, Spingler, B, Schnabl, J, Peng, G, Olieric, V, Sigel, R.K.O.
Deposit date:2014-07-22
Release date:2015-07-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The X-ray Structures of Six Octameric RNA Duplexes in the Presence of Different Di- and Trivalent Cations.
Int J Mol Sci, 17, 2016
5MV1
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BU of 5mv1 by Molmil
Crystal structure of the E protein of the Japanese encephalitis virulent virus
Descriptor: E protein
Authors:Liu, X, Zhao, X, Na, R, Li, L, Warkentin, E, Witt, J, Lu, X, Wei, Y, Peng, G, Li, Y, Wang, J.
Deposit date:2017-01-14
Release date:2018-05-23
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:The structure differences of Japanese encephalitis virus SA14 and SA14-14-2 E proteins elucidate the virulence attenuation mechanism.
Protein Cell, 10, 2019
5HIZ
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BU of 5hiz by Molmil
The structure of PEDV NSP9
Descriptor: Non-structural protein 9
Authors:Deng, F, Peng, G.
Deposit date:2016-01-12
Release date:2017-01-25
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Dimerization of Coronavirus nsp9 with Diverse Modes Enhances Its Nucleic Acid Binding Affinity.
J.Virol., 92, 2018
5MH2
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BU of 5mh2 by Molmil
Crystal structure of a DM9 domain containing protein from Crassostrea gigas with D22A mutation
Descriptor: CHLORIDE ION, GLYCEROL, Natterin-3
Authors:Weinert, T, Warkentin, E, Peng, G.
Deposit date:2016-11-22
Release date:2017-12-27
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:DM9 Domain Containing Protein Functions As a Pattern Recognition Receptor with Broad Microbial Recognition Spectrum.
Front Immunol, 8, 2017
3HAI
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BU of 3hai by Molmil
Crystal structure of human PACSIN1 F-BAR domain (P21 lattice)
Descriptor: CALCIUM ION, human PACSIN1 F-BAR
Authors:Wang, Q, Navarro, M.V.A.S, Peng, G, Rajashankar, K.R, Sondermann, H.
Deposit date:2009-05-01
Release date:2009-06-16
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.881 Å)
Cite:Molecular mechanism of membrane constriction and tubulation mediated by the F-BAR protein Pacsin/Syndapin.
Proc.Natl.Acad.Sci.USA, 106, 2009
4NZ8
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BU of 4nz8 by Molmil
Crystal structure of porcine aminopeptidase-N complexed with cleaved poly-alanine
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Aminopeptidase N, ...
Authors:Chen, L, Lin, Y.L, Peng, G, Li, F.
Deposit date:2013-12-11
Release date:2013-12-25
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for multifunctional roles of mammalian aminopeptidase N.
Proc.Natl.Acad.Sci.USA, 109, 2012
3HAH
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BU of 3hah by Molmil
Crystal structure of human PACSIN1 F-BAR domain (C2 lattice)
Descriptor: CALCIUM ION, human PACSIN1 F-BAR
Authors:Wang, Q, Navarro, M.V.A.S, Peng, G, Rajashankar, K.R, Sondermann, H.
Deposit date:2009-05-01
Release date:2009-06-16
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.77 Å)
Cite:Molecular mechanism of membrane constriction and tubulation mediated by the F-BAR protein Pacsin/Syndapin.
Proc.Natl.Acad.Sci.USA, 106, 2009
3HB3
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BU of 3hb3 by Molmil
High resolution crystal structure of Paracoccus denitrificans cytochrome c oxidase
Descriptor: ANTIBODY FV FRAGMENT, CALCIUM ION, COPPER (I) ION, ...
Authors:Koepke, J, Angerer, H, Peng, G.
Deposit date:2009-05-04
Release date:2009-06-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:High resolution crystal structure of Paracoccus denitrificans cytochrome c oxidase: New insights into the active site and the proton transfer pathways
Biochim.Biophys.Acta, 1787, 2009
3HAJ
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BU of 3haj by Molmil
Crystal structure of human PACSIN2 F-BAR domain (p212121 lattice)
Descriptor: CALCIUM ION, human PACSIN2 F-BAR
Authors:Wang, Q, Navarro, M.V.A.S, Peng, G, Rajashankar, K.R, Sondermann, H.
Deposit date:2009-05-01
Release date:2009-06-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.78 Å)
Cite:Molecular mechanism of membrane constriction and tubulation mediated by the F-BAR protein Pacsin/Syndapin.
Proc.Natl.Acad.Sci.USA, 106, 2009

 

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