Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 39 results

7SFZ
DownloadVisualize
BU of 7sfz by Molmil
Crystal structure of Mis18a-yippee domain
Descriptor: Protein Mis18-alpha, SULFATE ION, ZINC ION
Authors:Park, S.H, Cho, U.
Deposit date:2021-10-04
Release date:2022-10-26
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.002 Å)
Cite:Structural Basis for Mis18 Complex Assembly: Implications for Centromere Maintenance
To Be Published
7SFY
DownloadVisualize
BU of 7sfy by Molmil
Crystal structure of human Mis18ab_cc
Descriptor: Protein Mis18-alpha, Protein Mis18-beta
Authors:Park, S.H, Cho, U.
Deposit date:2021-10-04
Release date:2023-04-12
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Basis for Mis18 Complex Assembly: Implications for Centromere Maintenance
To Be Published
6L18
DownloadVisualize
BU of 6l18 by Molmil
XFEL structure of T4dCH D179N mutant complex with natively expressed dTMP
Descriptor: Deoxycytidylate 5-hydroxymethyltransferase, IODIDE ION, SODIUM ION, ...
Authors:Park, S.H, Song, H.K.
Deposit date:2019-09-27
Release date:2019-12-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A host dTMP-bound structure of T4 phage dCMP hydroxymethylase mutant using an X-ray free electron laser.
Sci Rep, 9, 2019
5CSS
DownloadVisualize
BU of 5css by Molmil
Crystal structure of triosephosphate isomerase from Thermoplasma acidophilum with glycerol 3-phosphate
Descriptor: CHLORIDE ION, SN-GLYCEROL-3-PHOSPHATE, Triosephosphate isomerase
Authors:Park, S.H, Kim, H.S, Song, M.K, Kim, K.R, Park, J.S, Han, B.W.
Deposit date:2015-07-23
Release date:2016-06-08
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Structure and Stability of the Dimeric Triosephosphate Isomerase from the Thermophilic Archaeon Thermoplasma acidophilum.
Plos One, 10, 2015
7XV2
DownloadVisualize
BU of 7xv2 by Molmil
TRIM E3 ubiquitin ligase
Descriptor: Tripartite motif-containing protein 72, ZINC ION
Authors:Park, S.H, Song, H.K.
Deposit date:2022-05-20
Release date:2023-05-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structure and activation of the RING E3 ubiquitin ligase TRIM72 on the membrane.
Nat.Struct.Mol.Biol., 30, 2023
7XZ1
DownloadVisualize
BU of 7xz1 by Molmil
TRIM E3 ubiquitin ligase
Descriptor: Tripartite motif-containing protein 72, ZINC ION
Authors:Park, S.H, Song, H.K.
Deposit date:2022-06-02
Release date:2023-07-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (5.2 Å)
Cite:Structure and activation of the RING E3 ubiquitin ligase TRIM72 on the membrane.
Nat.Struct.Mol.Biol., 30, 2023
7XZ0
DownloadVisualize
BU of 7xz0 by Molmil
TRIM E3 ubiquitin ligase
Descriptor: Tripartite motif-containing protein 72, ZINC ION
Authors:Park, S.H, Song, H.K.
Deposit date:2022-06-02
Release date:2023-07-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.28 Å)
Cite:Structure and activation of the RING E3 ubiquitin ligase TRIM72 on the membrane.
Nat.Struct.Mol.Biol., 30, 2023
7XYZ
DownloadVisualize
BU of 7xyz by Molmil
TRIM E3 ubiquitin ligase
Descriptor: Tripartite motif-containing protein 72, ZINC ION
Authors:Park, S.H, Song, H.K.
Deposit date:2022-06-02
Release date:2023-07-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (4.62 Å)
Cite:Structure and activation of the RING E3 ubiquitin ligase TRIM72 on the membrane.
Nat.Struct.Mol.Biol., 30, 2023
7XZ2
DownloadVisualize
BU of 7xz2 by Molmil
TRIM E3 ubiquitin ligase
Descriptor: Tripartite motif-containing protein 72, ZINC ION
Authors:Park, S.H, Song, H.K.
Deposit date:2022-06-02
Release date:2023-07-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structure and activation of the RING E3 ubiquitin ligase TRIM72 on the membrane.
Nat.Struct.Mol.Biol., 30, 2023
7XYY
DownloadVisualize
BU of 7xyy by Molmil
TRIM E3 ubiquitin ligase WT
Descriptor: Tripartite motif-containing protein 72, ZINC ION
Authors:Park, S.H, Song, H.K.
Deposit date:2022-06-02
Release date:2023-07-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (7.1 Å)
Cite:Structure and activation of the RING E3 ubiquitin ligase TRIM72 on the membrane.
Nat.Struct.Mol.Biol., 30, 2023
5CSR
DownloadVisualize
BU of 5csr by Molmil
Crystal structure of triosephosphate isomerase from Thermoplasma acidophilium
Descriptor: CHLORIDE ION, GLYCEROL, Triosephosphate isomerase
Authors:Park, S.H, Kim, H.S, Song, M.K, Park, H.S, Han, B.W.
Deposit date:2015-07-23
Release date:2016-06-08
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Structure and Stability of the Dimeric Triosephosphate Isomerase from the Thermophilic Archaeon Thermoplasma acidophilum.
Plos One, 10, 2015
6PWW
DownloadVisualize
BU of 6pww by Molmil
Cryo-EM structure of MLL1 in complex with RbBP5 and WDR5 bound to the nucleosome
Descriptor: DNA (146-MER), Histone H2A type 1, Histone H2B 1.1, ...
Authors:Park, S.H, Ayoub, A, Lee, Y.T, Xu, J, Zhang, W, Zhang, B, Zhang, Y, Cianfrocco, M.A, Su, M, Dou, Y, Cho, U.
Deposit date:2019-07-23
Release date:2019-12-18
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Cryo-EM structure of the human MLL1 core complex bound to the nucleosome.
Nat Commun, 10, 2019
6PWX
DownloadVisualize
BU of 6pwx by Molmil
Cryo-EM structure of RbBP5 bound to the nucleosome
Descriptor: DNA (146-MER), Histone H2A type 1, Histone H2B 1.1, ...
Authors:Park, S.H, Ayoub, A, Lee, Y.T, Xu, J, Zhang, W, Zhang, B, Zhang, Y, Cianfrocco, M.A, Su, M, Dou, Y, Cho, U.
Deposit date:2019-07-23
Release date:2019-12-18
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Cryo-EM structure of the human MLL1 core complex bound to the nucleosome.
Nat Commun, 10, 2019
6PWV
DownloadVisualize
BU of 6pwv by Molmil
Cryo-EM structure of MLL1 core complex bound to the nucleosome
Descriptor: DNA (147-MER), Histone H2A type 1, Histone H2B 1.1, ...
Authors:Park, S.H, Ayoub, A, Lee, Y.T, Xu, J, Zhang, W, Zhang, B, Zhang, Y, Cianfrocco, M.A, Su, M, Dou, Y, Cho, U.
Deposit date:2019-07-23
Release date:2019-12-18
Last modified:2023-08-16
Method:ELECTRON MICROSCOPY (6.2 Å)
Cite:Cryo-EM structure of the human MLL1 core complex bound to the nucleosome.
Nat Commun, 10, 2019
6W5N
DownloadVisualize
BU of 6w5n by Molmil
Cryo-EM structure of MLL1 in complex with RbBP5, WDR5, SET1, and ASH2L bound to the nucleosome (Class05)
Descriptor: DNA (147-MER), Histone H2A type 1, Histone H2B 1.1, ...
Authors:Park, S.H, Lee, Y.T, Ayoub, A, Dou, Y, Cho, U.
Deposit date:2020-03-13
Release date:2021-03-31
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (6 Å)
Cite:Mechanism for DPY30 and ASH2L intrinsically disordered regions to modulate the MLL/SET1 activity on chromatin.
Nat Commun, 12, 2021
6W5I
DownloadVisualize
BU of 6w5i by Molmil
Cryo-EM structure of MLL1 in complex with RbBP5, WDR5, SET1, and ASH2L bound to the nucleosome (Class01)
Descriptor: DNA (147-MER), Histone H2A, Histone H2B 1.1, ...
Authors:Park, S.H, Lee, Y.T, Ayoub, A, Dou, Y, Cho, U.
Deposit date:2020-03-13
Release date:2021-03-31
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (6.9 Å)
Cite:Mechanism for DPY30 and ASH2L intrinsically disordered regions to modulate the MLL/SET1 activity on chromatin.
Nat Commun, 12, 2021
6W5M
DownloadVisualize
BU of 6w5m by Molmil
Cryo-EM structure of MLL1 in complex with RbBP5, WDR5, SET1, and ASH2L bound to the nucleosome (Class02)
Descriptor: DNA (147-MER), Histone H2A type 1, Histone H2B 1.1, ...
Authors:Park, S.H, Lee, Y.T, Ayoub, A, Dou, Y, Cho, U.
Deposit date:2020-03-13
Release date:2021-03-31
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:Mechanism for DPY30 and ASH2L intrinsically disordered regions to modulate the MLL/SET1 activity on chromatin.
Nat Commun, 12, 2021
5Y7D
DownloadVisualize
BU of 5y7d by Molmil
Crystal structure of human Endothelial-overexpressed LPS associated factor 1
Descriptor: CHLORIDE ION, GLYCEROL, Protein CXorf40A, ...
Authors:Park, S.H, Kim, M.J, Park, J.S, Kim, H.J, Han, B.W.
Deposit date:2017-08-17
Release date:2018-08-22
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Crystal Structure of Human EOLA1 Implies Its Possibility of RNA Binding.
Molecules, 24, 2019
2GOH
DownloadVisualize
BU of 2goh by Molmil
Three-dimensional Structure of the Trans-membrane Domain of Vpu from HIV-1 in Aligned Phospholipid Bicelles
Descriptor: VPU protein
Authors:Park, S.H, De Angelis, A.A, Nevzorov, A.A, Wu, C.H, Opella, S.J.
Deposit date:2006-04-12
Release date:2006-08-08
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Three-Dimensional Structure of the Transmembrane Domain of Vpu from HIV-1 in Aligned Phospholipid Bicelles.
Biophys.J., 91, 2006
2GOF
DownloadVisualize
BU of 2gof by Molmil
Three-dimensional structure of the trans-membrane domain of Vpu from HIV-1 in aligned phospholipid bicelles
Descriptor: VPU protein
Authors:Park, S.H, De Angelis, A.A, Nevzorov, A.A, Wu, C.H, Opella, S.J.
Deposit date:2006-04-12
Release date:2006-08-08
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Three-Dimensional Structure of the Transmembrane Domain of Vpu from HIV-1 in Aligned Phospholipid Bicelles.
Biophys.J., 91, 2006
1PI7
DownloadVisualize
BU of 1pi7 by Molmil
Structure of the channel-forming trans-membrane domain of Virus protein "u" (Vpu) from HIV-1
Descriptor: VPU protein
Authors:Park, S.H, Mrse, A.A, Nevzorov, A.A, Mesleh, M.F, Oblatt-Montal, M, Montal, M, Opella, S.J.
Deposit date:2003-05-29
Release date:2003-11-11
Last modified:2024-05-22
Method:SOLID-STATE NMR
Cite:Three-dimensional structure of the channel-forming trans-membrane domain of virus protein "u" (Vpu) from HIV-1
J.Mol.Biol., 333, 2003
1PI8
DownloadVisualize
BU of 1pi8 by Molmil
Structure of the channel-forming trans-membrane domain of Virus protein "u" (Vpu) from HIV-1
Descriptor: VPU protein
Authors:Park, S.H, Mrse, A.A, Nevzorov, A.A, Mesleh, M.F, Oblatt-Montal, M, Montal, M, Opella, S.J.
Deposit date:2003-05-29
Release date:2003-11-11
Last modified:2024-05-22
Method:SOLID-STATE NMR
Cite:Three-dimensional structure of the channel-forming trans-membrane domain of virus protein "u" (Vpu) from HIV-1
J.Mol.Biol., 333, 2003
1PJE
DownloadVisualize
BU of 1pje by Molmil
Structure of the channel-forming trans-membrane domain of Virus protein "u"(Vpu) from HIV-1
Descriptor: VPU protein
Authors:Park, S.H, Mrse, A.A, Nevzorov, A.A, Mesleh, M.F, Oblatt-Montal, M, Montal, M, Opella, S.J.
Deposit date:2003-06-02
Release date:2003-10-14
Last modified:2024-05-22
Method:SOLID-STATE NMR
Cite:Three-dimensional structure of the channel-forming trans-membrane domain of Virus protein "u" (Vpu) from HIV-1
J.Mol.Biol., 333, 2003
7MBM
DownloadVisualize
BU of 7mbm by Molmil
Cryo-EM structure of MLL1-NCP (H3K4M) complex, mode01
Descriptor: DNA (145-MER), Histone H2A, Histone H2B 1.1, ...
Authors:Park, S.H, Ayoub, A, Lee, Y.T, Dou, Y, Cho, U.
Deposit date:2021-04-01
Release date:2021-12-29
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY
Cite:Regulation of MLL1 Methyltransferase Activity in Two Distinct Nucleosome Binding Modes.
Biochemistry, 61, 2022
7MBN
DownloadVisualize
BU of 7mbn by Molmil
Cryo-EM structure of MLL1-NCP (H3K4M) complex, mode02
Descriptor: DNA (146-MER), Histone H2A, Histone H2B 1.1, ...
Authors:Park, S.H, Ayoub, A, Lee, Y.T, Dou, Y, Cho, U.
Deposit date:2021-04-01
Release date:2021-12-29
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY
Cite:Regulation of MLL1 Methyltransferase Activity in Two Distinct Nucleosome Binding Modes.
Biochemistry, 61, 2022

 

12>

221051

PDB entries from 2024-06-12

PDB statisticsPDBj update infoContact PDBjnumon