Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 89 件

4RC0
DownloadVisualize
BU of 4rc0 by Molmil
X-ray structure of RNA containing guanosine phosphorodithioate
分子名称: 5'-R(*CP*GP*CP*GP*AP*AP*UP*UP*(A2M)P*(2SG)P*CP*G)-3'
著者Pallan, P.S, Egli, M.
登録日2014-09-13
公開日2015-09-16
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.13 Å)
主引用文献Crystal Structure, Stability and siRNA Activity of Phosphorodithioate-Modified RNAs
To be Published
4RBZ
DownloadVisualize
BU of 4rbz by Molmil
X-ray structure of RNA containing adenosine phosphorodithioate
分子名称: 5'-R(*CP*GP*CP*GP*(A2M)P*(ADS)P*UP*UP*AP*GP*CP*G)-3'
著者Pallan, P.S, Egli, M.
登録日2014-09-13
公開日2015-09-16
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.18 Å)
主引用文献Crystal Structure, Stability and siRNA Activity of Phosphorodithioate-Modified RNAs
To be Published
4RBY
DownloadVisualize
BU of 4rby by Molmil
First X-ray structure of RNA containing guanosine phosphorodithioate
分子名称: 5'-R(*CP*GP*CP*(2SG)P*AP*AP*UP*UP*AP*GP*CP*G)-3', STRONTIUM ION
著者Pallan, P.S, Egli, M.
登録日2014-09-13
公開日2015-09-16
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.19 Å)
主引用文献Crystal Structure, Stability and siRNA Activity of Phosphorodithioate-Modified RNAs
To be Published
4R21
DownloadVisualize
BU of 4r21 by Molmil
Zebra fish cytochrome P450 17A2 with Progesterone
分子名称: Cytochrome P450 family 17 polypeptide 2, PROGESTERONE, PROTOPORPHYRIN IX CONTAINING FE
著者Pallan, P.S, Egli, M.
登録日2014-08-08
公開日2014-12-31
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural and Kinetic Basis of Steroid 17 alpha, 20-Lyase Activity in Teleost Fish Cytochrome P450 17A1 and Its Absence in Cytochrome P450 17A2.
J.Biol.Chem., 290, 2015
4R1Z
DownloadVisualize
BU of 4r1z by Molmil
Zebra fish cytochrome P450 17A1 with Abiraterone
分子名称: Abiraterone, Cyp17a1 protein, PROTOPORPHYRIN IX CONTAINING FE
著者Pallan, P.S, Egli, M.
登録日2014-08-08
公開日2014-12-31
最終更新日2015-03-04
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structural and Kinetic Basis of Steroid 17 alpha, 20-Lyase Activity in Teleost Fish Cytochrome P450 17A1 and Its Absence in Cytochrome P450 17A2.
J.Biol.Chem., 290, 2015
4F2Y
DownloadVisualize
BU of 4f2y by Molmil
Structure of 3'-Fluoro Cyclohexenyl Nucleic Acid Decamer
分子名称: 5'-D(*GP*CP*GP*TP*AP*(XTF)P*AP*CP*GP*C)-3', MAGNESIUM ION
著者Pallan, P.S, Egli, M.
登録日2012-05-08
公開日2012-05-30
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Synthesis and Antisense Properties of Fluoro Cyclohexenyl Nucleic Acid (F-CeNA), a Nuclease Stable Mimic of 2'-Fluoro RNA.
J.Org.Chem., 77, 2012
4F2X
DownloadVisualize
BU of 4f2x by Molmil
Structure of 3'-Fluoro Cyclohexenyl Nucleic Acid Heptamer
分子名称: 5'-D(*CP*GP*CP*AP*CP*GP*C)-3', 5'-D(*GP*CP*GP*(XTF)P*GP*CP*G)-3', COBALT (III) ION, ...
著者Pallan, P.S, Egli, M.
登録日2012-05-08
公開日2012-05-30
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Synthesis and Antisense Properties of Fluoro Cyclohexenyl Nucleic Acid (F-CeNA), a Nuclease Stable Mimic of 2'-Fluoro RNA.
J.Org.Chem., 77, 2012
5VAJ
DownloadVisualize
BU of 5vaj by Molmil
BhRNase H - amide-RNA/DNA complex
分子名称: ACETATE ION, DNA (5'-D(*GP*AP*AP*TP*CP*AP*GP*GP*TP*GP*TP*C)-3'), GLYCEROL, ...
著者Pallan, P.S, Egli, M.
登録日2017-03-27
公開日2017-09-13
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Amide linkages mimic phosphates in RNA interactions with proteins and are well tolerated in the guide strand of short interfering RNAs.
Nucleic Acids Res., 45, 2017
5W1Z
DownloadVisualize
BU of 5w1z by Molmil
Crystal Structure of inosine-substituted decamer duplex DNA (I4)
分子名称: DNA (5'-D(*CP*CP*AP*IP*IP*CP*CP*(BRU)P*IP*I)-3'), MAGNESIUM ION, SODIUM ION
著者Pallan, P.S, Egli, M.
登録日2017-06-05
公開日2017-08-30
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Comparative analysis of inosine-substituted duplex DNA by circular dichroism and X-ray crystallography.
J. Biomol. Struct. Dyn., 36, 2018
5V1K
DownloadVisualize
BU of 5v1k by Molmil
Structure of R-GNA dodecamer
分子名称: RNA (5'-R(*CP*GP*CP*GP*AP*AP*(5BU)P*(8RJ)P*AP*GP*CP*G)-3')
著者Pallan, P.S, Egli, M.
登録日2017-03-02
公開日2017-06-21
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.18 Å)
主引用文献Chirality Dependent Potency Enhancement and Structural Impact of Glycol Nucleic Acid Modification on siRNA.
J. Am. Chem. Soc., 2017
5W20
DownloadVisualize
BU of 5w20 by Molmil
Crystal Structure of inosine-substituted duplex DNA
分子名称: DNA (5'-D(*CP*CP*AP*IP*IP*CP*CP*TP*GP*G)-3'), MAGNESIUM ION
著者Pallan, P.S, Egli, M.
登録日2017-06-05
公開日2017-08-23
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.36 Å)
主引用文献Comparative analysis of inosine-substituted duplex DNA by circular dichroism and X-ray crystallography.
J. Biomol. Struct. Dyn., 36, 2018
5V1L
DownloadVisualize
BU of 5v1l by Molmil
Structure of S-GNA dodecamer
分子名称: RNA (5'-R(*CP*GP*CP*GP*AP*AP*UP*(ZTH)P*AP*GP*CP*G)-3'), SPERMINE, STRONTIUM ION
著者Pallan, P.S, Egli, M.
登録日2017-03-02
公開日2017-06-14
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Chirality Dependent Potency Enhancement and Structural Impact of Glycol Nucleic Acid Modification on siRNA.
J. Am. Chem. Soc., 139, 2017
4O41
DownloadVisualize
BU of 4o41 by Molmil
Amide linked RNA
分子名称: AMIDE LINKED RNA, STRONTIUM ION
著者Pallan, P.S, Egli, M.
登録日2013-12-18
公開日2014-07-09
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Amides are excellent mimics of phosphate internucleoside linkages and are well tolerated in short interfering RNAs.
Nucleic Acids Res., 42, 2014
4OPK
DownloadVisualize
BU of 4opk by Molmil
Bh-RNaseH:2'-SMe-DNA complex
分子名称: 5'-D(*CP*GP*CP*GP*AP*AP*(USM)P*TP*CP*GP*CP*G)-3', GLYCEROL, Ribonuclease H
著者Pallan, P.S, Egli, M.
登録日2014-02-05
公開日2015-02-11
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.539 Å)
主引用文献Generating Crystallographic Models of DNA Dodecamers from Structures of RNase H:DNA Complexes.
Methods Mol.Biol., 1320
2RF3
DownloadVisualize
BU of 2rf3 by Molmil
Crystal Structure of Tricyclo-DNA: An Unusual Compensatory Change of Two Adjacent Backbone Torsion Angles
分子名称: 5'-d(CGCG(TCY)ATTCGCG)-3', SPERMINE, ZINC ION
著者Pallan, P.S, Ittig, D, Heroux, A, Wawrzak, Z, Leumann, C.J, Egli, M.
登録日2007-09-27
公開日2008-02-12
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal structure of tricyclo-DNA: an unusual compensatory change of two adjacent backbone torsion angles.
Chem.Commun.(Camb.), 2008, 2008
4OPJ
DownloadVisualize
BU of 4opj by Molmil
Bh-RNaseH:tcdA-DNA complex
分子名称: 5'-D(*CP*GP*CP*GP*AP*(TCY)P*TP*TP*CP*GP*CP*G)-3', GLYCEROL, Ribonuclease H
著者Pallan, P.S, Egli, M.
登録日2014-02-05
公開日2015-02-11
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.541 Å)
主引用文献Generating Crystallographic Models of DNA Dodecamers from Structures of RNase H:DNA Complexes.
Methods Mol.Biol., 1320
5VBU
DownloadVisualize
BU of 5vbu by Molmil
Crystal Structure of Human Cytochrome P450 21A2 Hydroxyprogesterone Complex
分子名称: (9beta)-17-hydroxypregn-4-ene-3,20-dione, Cytochrome P450 21-hydroxylase, PROTOPORPHYRIN IX CONTAINING FE
著者Pallan, P.S, Egli, M.
登録日2017-03-30
公開日2017-05-31
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (3.31 Å)
主引用文献Functional analysis of human cytochrome P450 21A2 variants involved in congenital adrenal hyperplasia.
J. Biol. Chem., 292, 2017
4R20
DownloadVisualize
BU of 4r20 by Molmil
Zebra fish cytochrome P450 17A2 with Abiraterone
分子名称: Abiraterone, Cytochrome P450 family 17 polypeptide 2, MERCURY (II) ION, ...
著者Pallan, P.S, Egli, M.
登録日2014-08-08
公開日2014-12-31
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.86 Å)
主引用文献Structural and Kinetic Basis of Steroid 17 alpha, 20-Lyase Activity in Teleost Fish Cytochrome P450 17A1 and Its Absence in Cytochrome P450 17A2.
J.Biol.Chem., 290, 2015
3UKE
DownloadVisualize
BU of 3uke by Molmil
(S)-cMOE-BNA decamer structure
分子名称: DNA (5'-D(*GP*CP*GP*TP*AP*(CSM)P*AP*CP*GP*C)-3')
著者Pallan, P.S, Egli, M.
登録日2011-11-09
公開日2012-06-20
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献Structure and nuclease resistance of 2',4'-constrained 2'-O-methoxyethyl (cMOE) and 2'-O-ethyl (cEt) modified DNAs.
Chem.Commun.(Camb.), 48, 2012
3UKB
DownloadVisualize
BU of 3ukb by Molmil
(R)-cEt-BNA decamer structure
分子名称: DNA (5'-D(*GP*CP*GP*TP*AP*(RCE)P*AP*CP*GP*C)-3')
著者Pallan, P.S, Egli, M.
登録日2011-11-09
公開日2012-06-20
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献Structure and nuclease resistance of 2',4'-constrained 2'-O-methoxyethyl (cMOE) and 2'-O-ethyl (cEt) modified DNAs.
Chem.Commun.(Camb.), 48, 2012
3UKC
DownloadVisualize
BU of 3ukc by Molmil
(S)-cEt-BNA decamer structure
分子名称: DNA (5'-D(*GP*CP*GP*TP*AP*(1TL)P*AP*CP*GP*C)-3')
著者Pallan, P.S, Egli, M.
登録日2011-11-09
公開日2012-06-20
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Structure and nuclease resistance of 2',4'-constrained 2'-O-methoxyethyl (cMOE) and 2'-O-ethyl (cEt) modified DNAs.
Chem.Commun.(Camb.), 48, 2012
3P4B
DownloadVisualize
BU of 3p4b by Molmil
Alternatingly modified 2'Fluoro RNA octamer f/rA2U2-P3
分子名称: 5'-R(*(CFZ)P*GP*(AF2)P*AP*(UFT)P*UP*(CFZ)P*G)-3', BARIUM ION
著者Pallan, P.S, Greene, E.M, Jicman, P.A, Pandey, R.K, Manoharan, M, Rozners, E, Egli, M.
登録日2010-10-06
公開日2011-01-05
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Unexpected origins of the enhanced pairing affinity of 2'-fluoro-modified RNA.
Nucleic Acids Res., 39, 2011
3P4C
DownloadVisualize
BU of 3p4c by Molmil
Alternatingly modified 2'Fluoro RNA octamer f/rA2U2-R32
分子名称: 5'-R(*(CFZ)P*GP*(AF2)P*AP*(UFT)P*UP*(CFZ)P*G)-3', STRONTIUM ION
著者Pallan, P.S, Greene, E.M, Jicman, P.A, Pandey, R.K, Manoharan, M, Rozners, E, Egli, M.
登録日2010-10-06
公開日2011-01-05
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Unexpected origins of the enhanced pairing affinity of 2'-fluoro-modified RNA.
Nucleic Acids Res., 39, 2011
3V06
DownloadVisualize
BU of 3v06 by Molmil
Crystal structure of S-6'-Me-3'-fluoro hexitol nucleic acid
分子名称: DNA (5'-D(*GP*CP*GP*TP*AP*(F5H)P*AP*CP*GP*C)-3'), STRONTIUM ION
著者Pallan, P.S, Egli, M.
登録日2011-12-07
公開日2012-02-08
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Insights from crystal structures into the opposite effects on RNA affinity caused by the s- and R-6'-methyl backbone modifications of 3'-fluoro hexitol nucleic Acid.
Biochemistry, 51, 2012
3V07
DownloadVisualize
BU of 3v07 by Molmil
Crystal structure of R-6'-Me-3'-fluoro hexitol nucleic acid
分子名称: DNA (5'-D(*GP*CP*GP*TP*AP*(F6H)P*AP*CP*GP*C)-3')
著者Pallan, P.S, Egli, M.
登録日2011-12-07
公開日2012-02-08
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.24 Å)
主引用文献Insights from crystal structures into the opposite effects on RNA affinity caused by the s- and R-6'-methyl backbone modifications of 3'-fluoro hexitol nucleic Acid.
Biochemistry, 51, 2012

223532

件を2024-08-07に公開中

PDB statisticsPDBj update infoContact PDBjnumon