4R1Z

Zebra fish cytochrome P450 17A1 with Abiraterone

Summary for 4R1Z

• Entry DOI: 10.2210/pdb4r1z/pdb
• Related: 4R20 4R21
• Descriptor: Cyp17a1 protein, PROTOPORPHYRIN IX CONTAINING FE, Abiraterone, ... (4 entities in total)
• Functional Keywords: cytochrome p450 17a1, abiraterone, 17 (alpha)-hydroxylation, 17alpha, 20-lyase, steroid biosynthesis, enzyme kinetics, oxidoreductase
• Biological source: Danio rerio (leopard danio,zebra danio,zebra fish)
• Total number of polymer chains: 2
• Total formula weight: 101132.17

Authors

Pallan, P.S.,Egli, M. (deposition date: 2014-08-08, release date: 2014-12-31, Last modification date: 2024-10-30)

Primary citation

Pallan, P.S.,Nagy, L.D.,Lei, L.,Gonzalez, E.,Kramlinger, V.M.,Azumaya, C.M.,Wawrzak, Z.,Waterman, M.R.,Guengerich, F.P.,Egli, M.
Structural and Kinetic Basis of Steroid 17 alpha, 20-Lyase Activity in Teleost Fish Cytochrome P450 17A1 and Its Absence in Cytochrome P450 17A2.
J.Biol.Chem., 290:3248-3268, 2015

PubMed Abstract: Cytochrome P450 (P450) 17A enzymes play a critical role in the oxidation of the steroids progesterone (Prog) and pregnenolone (Preg) to glucocorticoids and androgens. In mammals, a single enzyme, P450 17A1, catalyzes both 17α-hydroxylation and a subsequent 17α,20-lyase reaction with both Prog and Preg. Teleost fish contain two 17A P450s; zebrafish P450 17A1 catalyzes both 17α-hydroxylation and lyase reactions with Prog and Preg, and P450 17A2 is more efficient in pregnenolone 17α-hydroxylation but does not catalyze the lyase reaction, even in the presence of cytochrome b5. P450 17A2 binds all substrates and products, although more loosely than P450 17A1. Pulse-chase and kinetic spectral experiments and modeling established that the two-step P450 17A1 Prog oxidation is more distributive than the Preg reaction, i.e. 17α-OH product dissociates more prior to the lyase step. The drug orteronel selectively blocked the lyase reaction of P450 17A1 but only in the case of Prog. X-ray crystal structures of zebrafish P450 17A1 and 17A2 were obtained with the ligand abiraterone and with Prog for P450 17A2. Comparison of the two fish P450 17A-abiraterone structures with human P450 17A1 (DeVore, N. M., and Scott, E. E. (2013) Nature 482, 116-119) showed only a few differences near the active site, despite only ∼50% identity among the three proteins. The P450 17A2 structure differed in four residues near the heme periphery. These residues may allow the proposed alternative ferric peroxide mechanism for the lyase reaction, or residues removed from the active site may allow conformations that lead to the lyase activity.

PubMed: 25533464
DOI: 10.1074/jbc.M114.627265

Experimental method

X-RAY DIFFRACTION (3.3 Å)