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PDB: 167 results

3D3A
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BU of 3d3a by Molmil
Crystal structure of a beta-galactosidase from Bacteroides thetaiotaomicron
Descriptor: Beta-galactosidase
Authors:Palani, K, Kumaran, D, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-05-09
Release date:2008-05-27
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure of a beta-galactosidase from Bacteroides thetaiotaomicron.
To be Published
3FJY
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BU of 3fjy by Molmil
Crystal structure of a probable MutT1 protein from Bifidobacterium adolescentis
Descriptor: GLYCEROL, Probable MutT1 protein
Authors:Palani, K, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-12-15
Release date:2009-01-13
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure of a probable MutT1 protein from Bifidobacterium adolescentis
To be Published
3F6A
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BU of 3f6a by Molmil
Crystal structure of a hydrolase, NUDIX family from Clostridium perfringens
Descriptor: Hydrolase, NUDIX family
Authors:Palani, K, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-11-05
Release date:2008-11-25
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Crystal structure of a hydrolase, NUDIX family from Clostridium perfringens
To be Published
3H5T
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BU of 3h5t by Molmil
Crystal structure of a transcriptional regulator, Lacl family protein from Corynebacterium glutamicum
Descriptor: Transcriptional regulator, LacI family
Authors:Palani, K, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-04-22
Release date:2009-05-05
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.53 Å)
Cite:Crystal structure of a transcriptional regulator, Lacl family protein from Corynebacterium glutamicum
To be Published
3GPV
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BU of 3gpv by Molmil
Crystal structure of a transcriptional regulator, MerR family from Bacillus thuringiensis
Descriptor: Transcriptional regulator, MerR family
Authors:Palani, K, Kumaran, D, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-03-23
Release date:2009-04-14
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of a transcriptional regulator, MerR family from Bacillus thuringiensis
To be Published
3GYB
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BU of 3gyb by Molmil
Crystal structure of a LacI-family transcriptional regulatory protein from Corynebacterium glutamicum
Descriptor: MAGNESIUM ION, Transcriptional regulators (LACI-FAMILY TRANSCRIPTIONAL REGULATORY PROTEIN)
Authors:Palani, K, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-04-03
Release date:2009-04-14
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of a LacI-family transcriptional regulatory protein from Corynebacterium glutamicum
To be Published
3GRC
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BU of 3grc by Molmil
Crystal structure of a sensor protein from Polaromonas sp. JS666
Descriptor: Sensor protein, Kinase
Authors:Palani, K, Kumaran, D, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-03-25
Release date:2009-04-14
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Crystal structure of a sensor protein from Polaromonas sp. JS666
To be Published
3HH0
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BU of 3hh0 by Molmil
Crystal structure of a transcriptional regulator, MerR family from Bacillus cereus
Descriptor: Transcriptional regulator, MerR family
Authors:Palani, K, Zhang, Z, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-05-14
Release date:2009-05-26
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.67 Å)
Cite:Crystal structure of a transcriptional regulator, MerR family from Bacillus cereus
To be Published
3HD5
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BU of 3hd5 by Molmil
Crystal structure of a thiol:disulfide interchange protein dsbA from Bordetella parapertussis
Descriptor: Thiol:disulfide interchange protein dsbA
Authors:Palani, K, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-05-06
Release date:2009-05-19
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal structure of a thiol:disulfide interchange protein dsbA from Bordetella parapertussis
To be Published
3ID9
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BU of 3id9 by Molmil
Crystal structure of a MutT/NUDIX family protein from Bacillus thuringiensis
Descriptor: CHLORIDE ION, MutT/NUDIX family protein, SULFATE ION
Authors:Palani, K, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-07-20
Release date:2009-09-08
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Crystal structure of a MutT/NUDIX family protein from Bacillus thuringiensis
To be Published
3ILV
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BU of 3ilv by Molmil
Crystal structure of a glutamine-dependent NAD(+) synthetase from Cytophaga hutchinsonii
Descriptor: Glutamine-dependent NAD(+) synthetase
Authors:Palani, K, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-08-07
Release date:2009-08-18
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Crystal structure of a glutamine-dependent NAD(+) synthetase from Cytophaga hutchinsonii
To be Published
3HV1
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BU of 3hv1 by Molmil
Crystal structure of a polar amino acid ABC uptake transporter substrate binding protein from Streptococcus thermophilus
Descriptor: Polar amino acid ABC uptake transporter substrate binding protein
Authors:Palani, K, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-06-15
Release date:2009-06-23
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of a polar amino acid ABC uptake transporter substrate binding protein from Streptococcus thermophilus
To be Published
3G7S
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BU of 3g7s by Molmil
Crystal structure of a long-chain-fatty-acid-CoA ligase (FadD1) from Archaeoglobus fulgidus
Descriptor: Long-chain-fatty-acid--CoA ligase (FadD-1)
Authors:Palani, K, Kumaran, D, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-02-10
Release date:2009-03-03
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure of a long-chain-fatty-acid-CoA ligase (FadD1) from Archaeoglobus fulgidus
To be Published
2J6V
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BU of 2j6v by Molmil
Crystal structure of the DNA repair enzyme UV Damage Endonuclease
Descriptor: MANGANESE (II) ION, PHOSPHATE ION, UV ENDONUCLEASE
Authors:Paspaleva, K, Thomassen, E.A.J, Pannu, N.S, Goossen, N, Abrahams, J.P.
Deposit date:2006-10-04
Release date:2007-10-16
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal Structure of the DNA Repair Enzyme Ultraviolet Damage Endonuclease.
Structure, 15, 2007
3K85
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BU of 3k85 by Molmil
Crystal structure of a D-glycero-D-manno-heptose 1-phosphate kinase from Bacteriodes thetaiotaomicron
Descriptor: D-glycero-D-manno-heptose 1-phosphate kinase
Authors:Palani, K, Kumaran, D, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-10-13
Release date:2009-12-08
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Crystal structure of a D-glycero-D-manno-heptose 1-phosphate kinase from Bacteriodes thetaiotaomicron
To be Published
3K17
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BU of 3k17 by Molmil
Crystal structure of a Lin0012 protein from Listeria innocua
Descriptor: Lin0012 protein, TRIETHYLENE GLYCOL
Authors:Palani, K, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-09-25
Release date:2009-10-06
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of a Lin0012 protein from Listeria innocua
To be Published
6PWC
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BU of 6pwc by Molmil
A complex structure of arrestin-2 bound to neurotensin receptor 1
Descriptor: Beta-arrestin-1, Fab30 heavy chain, Fab30 light chain, ...
Authors:Yin, W, Li, Z, Jin, M, Yin, Y.-L, de Waal, P.W, Pal, K, Gao, X, He, Y, Gao, J, Wang, X, Zhang, Y, Zhou, H, Melcher, K, Jiang, Y, Cong, Y, Zhou, X.E, Yu, X, Xu, H.E.
Deposit date:2019-07-22
Release date:2019-12-04
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (4.9 Å)
Cite:A complex structure of arrestin-2 bound to a G protein-coupled receptor.
Cell Res., 29, 2019
5W0P
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BU of 5w0p by Molmil
Crystal structure of rhodopsin bound to visual arrestin determined by X-ray free electron laser
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Endolysin,Rhodopsin,S-arrestin
Authors:Zhou, X.E, He, Y, de Waal, P.W, Gao, X, Kang, Y, Van Eps, N, Yin, Y, Pal, K, Goswami, D, White, T.A, Barty, A, Latorraca, N.R, Chapman, H.N, Hubbell, W.L, Dror, R.O, Stevens, R.C, Cherezov, V, Gurevich, V.V, Griffin, P.R, Ernst, O.P, Melcher, K, Xu, H.E.
Deposit date:2017-05-31
Release date:2017-08-09
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3.013 Å)
Cite:Identification of Phosphorylation Codes for Arrestin Recruitment by G Protein-Coupled Receptors.
Cell, 170, 2017
4ZWJ
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BU of 4zwj by Molmil
Crystal structure of rhodopsin bound to arrestin by femtosecond X-ray laser
Descriptor: Chimera protein of human Rhodopsin, mouse S-arrestin, and T4 Endolysin
Authors:Kang, Y, Zhou, X.E, Gao, X, He, Y, Liu, W, Ishchenko, A, Barty, A, White, T.A, Yefanov, O, Han, G.W, Xu, Q, de Waal, P.W, Ke, J, Tan, M.H.E, Zhang, C, Moeller, A, West, G.M, Pascal, B, Eps, N.V, Caro, L.N, Vishnivetskiy, S.A, Lee, R.J, Suino-Powell, K.M, Gu, X, Pal, K, Ma, J, Zhi, X, Boutet, S, Williams, G.J, Messerschmidt, M, Gati, C, Zatsepin, N.A, Wang, D, James, D, Basu, S, Roy-Chowdhury, S, Conrad, C, Coe, J, Liu, H, Lisova, S, Kupitz, C, Grotjohann, I, Fromme, R, Jiang, Y, Tan, M, Yang, H, Li, J, Wang, M, Zheng, Z, Li, D, Howe, N, Zhao, Y, Standfuss, J, Diederichs, K, Dong, Y, Potter, C.S, Carragher, B, Caffrey, M, Jiang, H, Chapman, H.N, Spence, J.C.H, Fromme, P, Weierstall, U, Ernst, O.P, Katritch, V, Gurevich, V.V, Griffin, P.R, Hubbell, W.L, Stevens, R.C, Cherezov, V, Melcher, K, Xu, H.E, GPCR Network (GPCR)
Deposit date:2015-05-19
Release date:2015-07-29
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.302 Å)
Cite:Crystal structure of rhodopsin bound to arrestin by femtosecond X-ray laser.
Nature, 523, 2015
3TVD
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BU of 3tvd by Molmil
Crystal Structure of Mouse RhoA-GTP complex
Descriptor: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, MAGNESIUM ION, Transforming protein RhoA
Authors:Swaminathan, K, Pal, K, Jobichen, C.
Deposit date:2011-09-20
Release date:2012-10-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.989 Å)
Cite:Crystal structure of mouse RhoA:GTPgammaS complex in a centered lattice.
J.Struct.Funct.Genom., 13, 2012
6IH1
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BU of 6ih1 by Molmil
Crystal structure of a standalone versatile EAL protein from Vibrio cholerae O395 - c-di-GMP bound form
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), CALCIUM ION, cyclic di nucleotide phoshodiesterase
Authors:Yadav, M, Pal, K, Sen, U.
Deposit date:2018-09-28
Release date:2019-10-02
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structures of c-di-GMP/cGAMP degrading phosphodiesterase VcEAL: identification of a novel conformational switch and its implication.
Biochem.J., 476, 2019
6IJ2
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BU of 6ij2 by Molmil
Crystal structure of a standalone versatile EAL protein from Vibrio cholerae O395 - 5'-pGpG bound form
Descriptor: CALCIUM ION, EAL domain protein, RNA (5'-R(P*GP*G)-3')
Authors:Yadav, M, Pal, K, Sen, U.
Deposit date:2018-10-08
Release date:2019-10-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structures of c-di-GMP/cGAMP degrading phosphodiesterase VcEAL: identification of a novel conformational switch and its implication.
Biochem.J., 476, 2019
6K6T
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BU of 6k6t by Molmil
Crystal structure of a standalone versatile EAL protein from Vibrio cholerae O395 - c-di-IMP bound form
Descriptor: 9-[(1R,6R,8R,9S,10R,15S,17R,18S)-3,9,12,18-tetrakis(oxidanyl)-3,12-bis(oxidanylidene)-17-(6-oxidanylidene-3H-purin-9-yl)-2,4,7,11,13,16-hexaoxa-3$l^{5},12$l^{5}-diphosphatricyclo[13.3.0.0^{6,10}]octadecan-8-yl]-3H-purin-6-one, CALCIUM ION, EAL domain protein
Authors:Yadav, M, Pal, K, Sen, U.
Deposit date:2019-06-04
Release date:2020-06-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of a standalone versatile EAL protein from Vibrio cholerae O395 - c-di-IMP bound form
To Be Published
6IFQ
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BU of 6ifq by Molmil
Crystal structure of a standalone versatile EAL protein from Vibrio cholerae O395 - Apo form
Descriptor: CALCIUM ION, cyclic di nucleotide phoshodiesterase
Authors:Yadav, M, Pal, K, Sen, U.
Deposit date:2018-09-20
Release date:2019-10-02
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structures of c-di-GMP/cGAMP degrading phosphodiesterase VcEAL: identification of a novel conformational switch and its implication.
Biochem.J., 476, 2019
6IH7
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BU of 6ih7 by Molmil
Crystal structure of a standalone versatile EAL protein from Vibrio cholerae O395 - 3',3'-cGAMP bound form
Descriptor: 2-amino-9-[(2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-9-(6-amino-9H-purin-9-yl)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecin-2-yl]-1,9-dihydro-6H-purin-6-one, CALCIUM ION, cyclic di nucleotide phoshodiesterase
Authors:Yadav, M, Pal, K, Sen, U.
Deposit date:2018-09-28
Release date:2019-10-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structures of c-di-GMP/cGAMP degrading phosphodiesterase VcEAL: identification of a novel conformational switch and its implication.
Biochem.J., 476, 2019

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