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PDB: 306 results

2ZZ3
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Covalent complex of orotidine monophosphate decarboxylase D70A mutant from M. thermoautotrophicus with 6-cyano-UMP
Descriptor: 6-cyanouridine 5'-phosphate, GLYCEROL, Orotidine 5'-phosphate decarboxylase
Authors:Fujihashi, M, Pai, E.F.
Deposit date:2009-02-05
Release date:2009-03-24
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural characterization of the molecular events during a slow substrate-product transition in orotidine 5'-monophosphate decarboxylase
J.Mol.Biol., 387, 2009
3EYO
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BU of 3eyo by Molmil
Crystal structure of anti-human cytomegalovirus antibody 8F9
Descriptor: 8f9 Fab, AD-2
Authors:Thomson, C.A, Bryson, S, McLean, G.R, Creagh, A.L, Pai, E.F, Schrader, J.W.
Deposit date:2008-10-21
Release date:2008-12-16
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Germline V-genes sculpt the binding site of a family of antibodies neutralizing human cytomegalovirus.
Embo J., 27, 2008
3F12
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Germline V-genes sculpt the binding site of a family of antibodies neutralizing human cytomegalovirus
Descriptor: 8f9 Fab, M2J1 Fab
Authors:Thomson, C.A, Bryson, S, McLean, G.R, Creagh, A.L, Pai, E.F, Schrader, J.W.
Deposit date:2008-10-27
Release date:2009-09-15
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Germline V-genes sculpt the binding site of a family of antibodies neutralizing human cytomegalovirus.
Embo J., 27, 2008
2ZZ5
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BU of 2zz5 by Molmil
Orotidine Monophosphate Deacarboxylase D70A/K72A double mutant from M. thermoautotrophicum complexed with 6- cyano-UMP
Descriptor: 6-cyanouridine 5'-phosphate, Orotidine 5'-phosphate decarboxylase
Authors:Fujihashi, M, Pai, E.F.
Deposit date:2009-02-05
Release date:2009-03-24
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Structural characterization of the molecular events during a slow substrate-product transition in orotidine 5'-monophosphate decarboxylase
J.Mol.Biol., 387, 2009
2ZZ4
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BU of 2zz4 by Molmil
Covalent complex of orotidine monophosphate decarboxylase D75N mutant from M. thermoautotrophicum with 6-cyano-UMP
Descriptor: 6-cyanouridine 5'-phosphate, GLYCEROL, Orotidine 5'-phosphate decarboxylase
Authors:Fujihashi, M, Pai, E.F.
Deposit date:2009-02-05
Release date:2009-03-24
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Structural characterization of the molecular events during a slow substrate-product transition in orotidine 5'-monophosphate decarboxylase
J.Mol.Biol., 387, 2009
2ZZ2
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BU of 2zz2 by Molmil
Orotidine Monophosphate Decarboxylase K72A mutant from M. thermoautotrophicum complexed with 6-cyano-UMP
Descriptor: 6-cyanouridine 5'-phosphate, GLYCEROL, Orotidine 5'-phosphate decarboxylase
Authors:Fujihashi, M, Pai, E.F.
Deposit date:2009-02-05
Release date:2009-03-24
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Structural characterization of the molecular events during a slow substrate-product transition in orotidine 5'-monophosphate decarboxylase
J.Mol.Biol., 387, 2009
2ZZ1
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BU of 2zz1 by Molmil
Snapshot of the reaction from 6-CN-UMP to BMP catalyzed by Orotidine Monophosphate Deacarboxylase from M. thermoautotrophicum
Descriptor: 6-HYDROXYURIDINE-5'-PHOSPHATE, 6-cyanouridine 5'-phosphate, GLYCEROL, ...
Authors:Fujihashi, M, Pai, E.F.
Deposit date:2009-02-05
Release date:2009-03-24
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Structural characterization of the molecular events during a slow substrate-product transition in orotidine 5'-monophosphate decarboxylase
J.Mol.Biol., 387, 2009
3D0L
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BU of 3d0l by Molmil
Crystal structure of the HIV-1 broadly neutralizing antibody 2F5 in complex with the gp41 FP-MPER Hyb3K construct 514GIGALFLGFLGAAGS528KK-Ahx-655KNEQELLELDKWASLWN671
Descriptor: 2F5 heavy chain, 2F5 light chain, GLYCEROL, ...
Authors:Bryson, S, Julien, J.P, Pai, E.F.
Deposit date:2008-05-01
Release date:2008-10-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural details of HIV-1 recognition by the broadly neutralizing monoclonal antibody 2F5: epitope conformation, antigen-recognition loop mobility, and anion-binding site.
J.Mol.Biol., 384, 2008
3D0V
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BU of 3d0v by Molmil
Crystal structure of the HIV-1 Cross Neutralizing Monoclonal Antibody 2F5 in complex with gp41 Peptide LLELDKWASLW
Descriptor: 2F5 Fab heavy chain, 2F5 Fab light chain, gp41 peptide LLELDKWASLW
Authors:Bryson, S, Julien, J.P, Pai, E.F.
Deposit date:2008-05-02
Release date:2008-07-29
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural details of HIV-1 recognition by the broadly neutralizing monoclonal antibody 2F5: epitope conformation, antigen-recognition loop mobility, and anion-binding site.
J.Mol.Biol., 384, 2008
2FTP
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BU of 2ftp by Molmil
Crystal Structure of hydroxymethylglutaryl-CoA lyase from Pseudomonas aeruginosa
Descriptor: GLYCEROL, SODIUM ION, hydroxymethylglutaryl-CoA lyase
Authors:Xiao, T, Evdokimova, E, Liu, Y, Kudritska, M, Savchenko, A, Pai, E.F, Edwards, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2006-01-24
Release date:2006-03-14
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure of hydroxymethylglutaryl-CoA lyase from Pseudomonas aeruginosa
To be Published
3EYQ
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BU of 3eyq by Molmil
Crystal structure of MJ5 Fab, a germline antibody variant of anti-human cytomegalovirus antibody 8f9
Descriptor: 8f9 Fab, M2J5 Fab
Authors:Thomson, C.A, Bryson, S, McLean, G.R, Creagh, A.L, Pai, E.F, Schrader, J.W.
Deposit date:2008-10-21
Release date:2008-12-16
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Germline V-genes sculpt the binding site of a family of antibodies neutralizing human cytomegalovirus.
Embo J., 27, 2008
3EYF
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BU of 3eyf by Molmil
Crystal structure of anti-human cytomegalovirus antibody 8f9 plus gB peptide
Descriptor: 8f9 Fab, AD-2, GLYCEROL, ...
Authors:Thomson, C.A, Bryson, S, McLean, G.R, Creagh, A.L, Pai, E.F, Schrader, J.W.
Deposit date:2008-10-20
Release date:2008-12-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Germline V-genes sculpt the binding site of a family of antibodies neutralizing human cytomegalovirus.
Embo J., 27, 2008
3DRQ
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BU of 3drq by Molmil
Crystal structure of the HIV-1 broadly neutralizing antibody 2F5 in complex with the gp41 FP-MPER Hyb3K construct 514GIGALFLGFLGAAGS528KK-Ahx-655KNEQELLELDKWASLWN671 soaked in PEG/2-propanol solution
Descriptor: 2F5 Fab' heavy chain, 2F5 Fab' light chain, GLYCEROL, ...
Authors:Bryson, S, Julien, J.P, Pai, E.F.
Deposit date:2008-07-11
Release date:2008-10-07
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural details of HIV-1 recognition by the broadly neutralizing monoclonal antibody 2F5: epitope conformation, antigen-recognition loop mobility, and anion-binding site.
J.Mol.Biol., 384, 2008
3DBP
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BU of 3dbp by Molmil
Crystal Structure of Human Orotidine 5'-Monophosphate Decarboxylase Complexed with 6-NH2-UMP
Descriptor: 6-AMINOURIDINE 5'-MONOPHOSPHATE, Orotidine 5'-phosphate decarboxylase, SULFATE ION
Authors:Liu, Y, To, T, Bello, A.M, Kotra, L.P, Pai, E.F.
Deposit date:2008-06-02
Release date:2009-06-23
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal Structure of Human Orotidine 5'-Monophosphate Decarboxylase Complexed with 6-NH2-UMP
To be Published
521P
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BU of 521p by Molmil
THREE-DIMENSIONAL STRUCTURES OF H-RAS P21 MUTANTS: MOLECULAR BASIS FOR THEIR INABILITY TO FUNCTION AS SIGNAL SWITCH MOLECULES
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, H-RAS P21 PROTEIN, MAGNESIUM ION
Authors:Schlichting, I, Krengel, U, Kabsch, W, Wittinghofer, A, Pai, E.F.
Deposit date:1991-06-06
Release date:1994-01-31
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Three-dimensional structures of H-ras p21 mutants: molecular basis for their inability to function as signal switch molecules.
Cell(Cambridge,Mass.), 62, 1990
3DRT
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BU of 3drt by Molmil
Crystal structure of the HIV-1 broadly neutralizing antibody 2F5 in complex with the gp41 scrambledFP-MPER scrHyb3K construct GIGAFGLLGFLAAGSKK-Ahx-K656NEQELLELDKWASLWN671
Descriptor: 2F5 Fab' heavy chain, 2F5 Fab' light chain, GLYCEROL, ...
Authors:Julien, J.-P, Bryson, S, de la Torre, B.G, Andreu, D, Nieva, J.L, Pai, E.F.
Deposit date:2008-07-11
Release date:2009-06-23
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structural constraints imposed by the conserved fusion peptide on the HIV-1 gp41 epitope recognized by the broadly neutralizing antibody 2F5.
J.Phys.Chem.B, 113, 2009
3DRO
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BU of 3dro by Molmil
Crystal structure of the HIV-1 Cross Neutralizing Antibody 2F5 in complex with gp41 Peptide ELLELDKWASLWN grown in ammonium sulfate
Descriptor: 2F5 Fab heavy chain, 2F5 Fab light chain, ELLELDKWASLWN gp41 peptide
Authors:Julien, J.-P, Bryson, S, Pai, E.F.
Deposit date:2008-07-11
Release date:2008-07-29
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:Structural details of HIV-1 recognition by the broadly neutralizing monoclonal antibody 2F5: epitope conformation, antigen-recognition loop mobility, and anion-binding site.
J.Mol.Biol., 384, 2008
2ZZ6
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BU of 2zz6 by Molmil
Covalent complex of orotidine monophosphate decarboxylase from M. thermoautotrophicum with 6-azido-UMP
Descriptor: 6-azidouridine 5'-(dihydrogen phosphate), GLYCEROL, Orotidine 5'-phosphate decarboxylase
Authors:Fujihashi, M, Pai, E.F.
Deposit date:2009-02-05
Release date:2009-03-24
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Structural characterization of the molecular events during a slow substrate-product transition in orotidine 5'-monophosphate decarboxylase
J.Mol.Biol., 387, 2009
3D7R
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BU of 3d7r by Molmil
Crystal structure of a putative esterase from Staphylococcus aureus
Descriptor: BROMIDE ION, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
Authors:Lam, R, Battaile, K.P, Chan, T, Romanov, V, Lam, K, Soloveychik, M, Wu-Brown, J, Pai, E.F, Chirgadze, N.Y.
Deposit date:2008-05-21
Release date:2009-06-09
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Crystal structure of a putative esterase from Staphylococcus aureus
To be Published
3AN1
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BU of 3an1 by Molmil
Crystal structure of rat D428A mutant, urate bound form
Descriptor: BICARBONATE ION, CALCIUM ION, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Okamoto, K, Kawaguchi, Y, Eger, B.T, Pai, E.F, Nishino, T.
Deposit date:2010-08-27
Release date:2010-12-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Crystal Structures of Urate Bound Form of Xanthine Oxidoreductase: Substrate Orientation and Structure of the Key Reaction Intermediate
J.Am.Chem.Soc., 132, 2010
2HN2
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BU of 2hn2 by Molmil
Crystal structure of the CorA Mg2+ transporter homologue from T. maritima in complex with divalent cations
Descriptor: CALCIUM ION, Magnesium transport protein corA
Authors:Payandeh, J, Pai, E.F.
Deposit date:2006-07-11
Release date:2006-08-29
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:A structural basis for Mg(2+) homeostasis and the CorA translocation cycle.
Embo J., 25, 2006
2HN1
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BU of 2hn1 by Molmil
Crystal structure of a CorA soluble domain from A. fulgidus in complex with Co2+
Descriptor: COBALT (II) ION, Magnesium and cobalt transporter
Authors:Payandeh, J, Pai, E.F.
Deposit date:2006-07-11
Release date:2006-08-29
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:A structural basis for Mg(2+) homeostasis and the CorA translocation cycle.
Embo J., 25, 2006
3AMZ
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BU of 3amz by Molmil
Bovine Xanthine Oxidoreductase urate bound form
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, BICARBONATE ION, CALCIUM ION, ...
Authors:Okamoto, K, Eger, B.T, Pai, E.F, Nishino, T.
Deposit date:2010-08-27
Release date:2010-12-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structures of Urate Bound Form of Xanthine Oxidoreductase: Substrate Orientation and Structure of the Key Reaction Intermediate
J.Am.Chem.Soc., 132, 2010
3AX7
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BU of 3ax7 by Molmil
Bovine Xanthine Oxidase, protease cleaved form
Descriptor: 2-HYDROXYBENZOIC ACID, BICARBONATE ION, CALCIUM ION, ...
Authors:Ishikita, H, Eger, B.T, Pai, E.F, Okamoto, K, Nishino, T.
Deposit date:2011-03-30
Release date:2012-02-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Protein conformational gating of enzymatic activity in xanthine oxidoreductase
J.Am.Chem.Soc., 134, 2012
3AX9
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BU of 3ax9 by Molmil
Bovine xanthine oxidase, protease cleaved form
Descriptor: 2-HYDROXYBENZOIC ACID, BICARBONATE ION, CALCIUM ION, ...
Authors:Ishikita, H, Eger, B.T, Pai, E.F, Okamoto, K, Nishino, T.
Deposit date:2011-03-31
Release date:2012-02-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Protein conformational gating of enzymatic activity in xanthine oxidoreductase
J.Am.Chem.Soc., 134, 2012

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