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PDB: 535 results

6E3Z
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BU of 6e3z by Molmil
Structure of Bace-1 in complex with Ligand 8
Descriptor: Beta-secretase 1, N-{3-[(2R,3R)-5-amino-3-methyl-2-(trifluoromethyl)-3,6-dihydro-2H-1,4-oxazin-3-yl]-4-fluorophenyl}-3,5-dichloropyridine-2-carboxamide
Authors:Shaffer, P.L.
Deposit date:2018-07-16
Release date:2019-09-11
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Discovery and Chemical Development of JNJ-50138803, a Clinical Candidate BACE1 Inhibitor
Acs Symp.Ser., 1307, 2020
4MAL
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BU of 4mal by Molmil
TPR3 of FimV from P. aeruginosa (PAO1)
Descriptor: Motility protein FimV
Authors:Nguyen, Y, Zhang, K, Daniel-Ivad, M, Sugiman-Marangos, S.N, Junop, M.S, Burrows, L.L, Howell, P.L.
Deposit date:2013-08-16
Release date:2014-08-20
Last modified:2016-02-24
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structure of TPR2 from FimV
To be Published
3K90
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BU of 3k90 by Molmil
The Abscisic acid receptor PYR1 in complex with Abscisic Acid
Descriptor: (2Z,4E)-5-[(1S)-1-hydroxy-2,6,6-trimethyl-4-oxocyclohex-2-en-1-yl]-3-methylpenta-2,4-dienoic acid, ACETIC ACID, GLYCEROL, ...
Authors:Dupeux, F.D, Santiago, J, Rodriguez, P.L, Marquez, J.A.
Deposit date:2009-10-15
Release date:2009-11-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:The abscisic acid receptor PYR1 in complex with abscisic acid.
Nature, 462, 2009
5WFT
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BU of 5wft by Molmil
PelB 319-436 from Pseudomonas aeruginosa PAO1
Descriptor: PelB
Authors:Marmont, L.S, Howell, P.L.
Deposit date:2017-07-12
Release date:2017-10-04
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.821 Å)
Cite:PelA and PelB proteins form a modification and secretion complex essential for Pel polysaccharide-dependent biofilm formation in Pseudomonas aeruginosa.
J. Biol. Chem., 292, 2017
2AFP
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BU of 2afp by Molmil
THE SOLUTION STRUCTURE OF TYPE II ANTIFREEZE PROTEIN REVEALS A NEW MEMBER OF THE LECTIN FAMILY
Descriptor: PROTEIN (SEA RAVEN TYPE II ANTIFREEZE PROTEIN)
Authors:Gronwald, W, Loewen, M.C, Lix, B, Daugulis, A.J, Sonnichsen, F.D, Davies, P.L, Sykes, B.D.
Deposit date:1998-12-14
Release date:1998-12-23
Last modified:2024-10-09
Method:SOLUTION NMR
Cite:The solution structure of type II antifreeze protein reveals a new member of the lectin family.
Biochemistry, 37, 1998
6UH5
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BU of 6uh5 by Molmil
Structural basis of COMPASS eCM recognition of the H2Bub nucleosome
Descriptor: Bre2, DNA (146-MER), H3 N-terminus, ...
Authors:Hsu, P.L, Shi, H, Zheng, N.
Deposit date:2019-09-26
Release date:2019-11-20
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural Basis of H2B Ubiquitination-Dependent H3K4 Methylation by COMPASS.
Mol.Cell, 76, 2019
8MSI
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BU of 8msi by Molmil
TYPE III ANTIFREEZE PROTEIN ISOFORM HPLC 12 N14SQ44T
Descriptor: PROTEIN (ANTIFREEZE PROTEIN TYPE III)
Authors:Graether, S.P, Deluca, C.I, Baardsnes, J, Hill, G.A, Davies, P.L, Jia, Z.
Deposit date:1999-01-24
Release date:1999-04-29
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Quantitative and qualitative analysis of type III antifreeze protein structure and function.
J.Biol.Chem., 274, 1999
6AME
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BU of 6ame by Molmil
TYPE III ANTIFREEZE PROTEIN ISOFORM HPLC 12 M21A
Descriptor: PROTEIN (ANTIFREEZE PROTEIN TYPE III)
Authors:Graether, S.P, Deluca, C.I, Baardsnes, J, Hill, G.A, Davies, P.L, Jia, Z.
Deposit date:1999-01-24
Release date:1999-04-29
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Quantitative and qualitative analysis of type III antifreeze protein structure and function.
J.Biol.Chem., 274, 1999
6LA8
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BU of 6la8 by Molmil
349 bp di-nucleosome harboring cohesive DNA termini assembled with linker histone H1.0
Descriptor: CALCIUM ION, DNA (349-MER), Histone H1.0, ...
Authors:Adhireksan, Z, Lee, P.L, Sharma, D, Davey, C.A.
Deposit date:2019-11-12
Release date:2020-10-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Near-atomic resolution structures of interdigitated nucleosome fibres.
Nat Commun, 11, 2020
2POA
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BU of 2poa by Molmil
Schistosoma mansoni Sm14 Fatty Acid-Binding Protein: improvement of protein stability by substitution of the single Cys62 residue
Descriptor: 14 kDa fatty acid-binding protein
Authors:Ramos, C.R.R, Oyama Jr, S, Sforca, M.L, Pertinhez, T.A, Ho, P.L, Spisni, A.
Deposit date:2007-04-26
Release date:2008-06-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Stability improvement of the fatty acid binding protein Sm14 from S. mansoni by Cys replacement: Structural and functional characterization of a vaccine candidate.
Biochim.Biophys.Acta, 1794, 2009
3BOW
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BU of 3bow by Molmil
Structure of M-calpain in complex with Calpastatin
Descriptor: CALCIUM ION, Calpain small subunit 1, Calpain-2 catalytic subunit, ...
Authors:Hanna, R.A, Campbell, R.L, Davies, P.L.
Deposit date:2007-12-17
Release date:2008-11-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Calcium-bound structure of calpain and its mechanism of inhibition by calpastatin.
Nature, 456, 2008
6R62
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BU of 6r62 by Molmil
Crystal structure of a class II pyruvate aldolase from Sphingomonas wittichii RW1 in complex with hydroxypyruvate
Descriptor: 3-HYDROXYPYRUVIC ACID, ACETATE ION, BROMIDE ION, ...
Authors:Marsden, S.R, Mestrom, L, Hagedoorn, P.L, Bento, I, McMillan, D.G.G, Hanefeld, U.
Deposit date:2019-03-26
Release date:2019-05-29
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:CH-Pi Interactions Promote the Conversion of Hydroxypyruvate in a Class II Pyruvate Aldolase
Adv.Synth.Catal., 2019
4WCJ
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BU of 4wcj by Molmil
Structure of IcaB from Ammonifex degensii
Descriptor: CHLORIDE ION, Polysaccharide deacetylase, ZINC ION
Authors:Little, D.J, Bamford, N.C, Pokrovskaya, V, Robinson, H, Nitz, M, Howell, P.L.
Deposit date:2014-09-04
Release date:2014-11-12
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural Basis for the De-N-acetylation of Poly-beta-1,6-N-acetyl-d-glucosamine in Gram-positive Bacteria.
J.Biol.Chem., 289, 2014
4WCX
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BU of 4wcx by Molmil
Crystal structure of HydG: A maturase of the [FeFe]-hydrogenase
Descriptor: ALANINE, Biotin and thiamin synthesis associated, FE (III) ION, ...
Authors:Dinis, P.C, Harmer, J.E, Driesener, R.C, Roach, P.L.
Deposit date:2014-09-05
Release date:2015-02-04
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:X-ray crystallographic and EPR spectroscopic analysis of HydG, a maturase in [FeFe]-hydrogenase H-cluster assembly.
Proc.Natl.Acad.Sci.USA, 112, 2015
3BL6
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BU of 3bl6 by Molmil
Crystal structure of Staphylococcus aureus 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase in complex with formycin A
Descriptor: (1S)-1-(7-amino-1H-pyrazolo[4,3-d]pyrimidin-3-yl)-1,4-anhydro-D-ribitol, 5'-methylthioadenosine nucleosidase/S-adenosylhomocysteine nucleosidase
Authors:Siu, K.K.W, Lee, J.E, Smith, G.D, Horvatin, C, Howell, P.L.
Deposit date:2007-12-10
Release date:2008-06-10
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of Staphylococcus aureus 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
Acta Crystallogr.,Sect.F, 64, 2008
2QSU
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BU of 2qsu by Molmil
Structure of Arabidopsis thaliana 5'-Methylthioadenosine nucleosidase in apo form
Descriptor: 5'-methylthioadenosine nucleosidase
Authors:Siu, K.K.W, Howell, P.L.
Deposit date:2007-07-31
Release date:2008-04-01
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Molecular determinants of substrate specificity in plant 5'-methylthioadenosine nucleosidases.
J.Mol.Biol., 378, 2008
8Y9C
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BU of 8y9c by Molmil
De novo design mini-binder in complex with TcdB4
Descriptor: De novo design Minibinder, Toxin B, ZINC ION
Authors:Lv, X.C, Lu, P.L.
Deposit date:2024-02-06
Release date:2024-08-28
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3 Å)
Cite:De novo design of mini-protein binders broadly neutralizing Clostridioides difficile toxin B variants.
Nat Commun, 15, 2024
8Y9B
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BU of 8y9b by Molmil
TcdB1 in complex with mini-binder
Descriptor: De novo design mini-binder, Toxin B, ZINC ION
Authors:Lv, X.C, Lu, P.L.
Deposit date:2024-02-06
Release date:2024-08-28
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:De novo design of mini-protein binders broadly neutralizing Clostridioides difficile toxin B variants.
Nat Commun, 15, 2024
7AME
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BU of 7ame by Molmil
TYPE III ANTIFREEZE PROTEIN ISOFORM HPLC 12 T15A
Descriptor: PROTEIN (ANTIFREEZE PROTEIN TYPE III)
Authors:Graether, S.P, Deluca, C.I, Baardsnes, J, Hill, G.A, Davies, P.L, Jia, Z.
Deposit date:1999-01-24
Release date:1999-04-29
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Quantitative and qualitative analysis of type III antifreeze protein structure and function.
J.Biol.Chem., 274, 1999
6SHT
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BU of 6sht by Molmil
Molecular structure of mouse apoferritin resolved at 2.7 Angstroms with the Glacios cryo-microscope
Descriptor: FE (III) ION, Ferritin heavy chain, MAGNESIUM ION
Authors:Hamdi, F, Tueting, C, Semchonok, D, Kyrilis, F, Meister, A, Skalidis, I, Schmidt, L, Parthier, C, Stubbs, M.T, Kastritis, P.L.
Deposit date:2019-08-08
Release date:2020-05-13
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (2.73 Å)
Cite:2.7 angstrom cryo-EM structure of vitrified M. musculus H-chain apoferritin from a compact 200 keV cryo-microscope.
Plos One, 15, 2020
4U0P
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BU of 4u0p by Molmil
The Crystal Structure of Lipoyl Synthase in Complex with S-Adenosyl Homocysteine
Descriptor: IRON/SULFUR CLUSTER, Lipoyl synthase 2, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Harmer, J.E, Hiscox, M.J, Sandy, J, Dinis, P.C, Roach, P.L.
Deposit date:2014-07-13
Release date:2014-08-20
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.623 Å)
Cite:Structures of lipoyl synthase reveal a compact active site for controlling sequential sulfur insertion reactions.
Biochem.J., 464, 2014
7BGJ
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BU of 7bgj by Molmil
C. thermophilum Pyruvate Dehydrogenase Complex Core
Descriptor: Acetyltransferase component of pyruvate dehydrogenase complex
Authors:Tueting, C, Kastritis, P.L.
Deposit date:2021-01-07
Release date:2021-02-10
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (6.9 Å)
Cite:Integrative structure of a 10-megadalton eukaryotic pyruvate dehydrogenase complex from native cell extracts.
Cell Rep, 34, 2021
5LLF
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BU of 5llf by Molmil
Structure of Polyphosphate Kinase 2 mutant D117N from Francisella tularensis with polyphosphate
Descriptor: CHLORIDE ION, PHOSPHATE ION, Polyphosphate kinase 2, ...
Authors:Roach, P.L, Parnell, A.E.
Deposit date:2016-07-27
Release date:2017-10-11
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Substrate recognition and mechanism revealed by ligand-bound polyphosphate kinase 2 structures.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
4U0O
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BU of 4u0o by Molmil
Crystal structure of Thermosynechococcus elongatus Lipoyl Synthase 2 complexed with MTA and DTT
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 5'-DEOXY-5'-METHYLTHIOADENOSINE, IRON/SULFUR CLUSTER, ...
Authors:Harmer, J.E, Hiscox, M.J, Dinis, P.C, Sandy, J, Roach, P.L.
Deposit date:2014-07-13
Release date:2014-08-20
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structures of lipoyl synthase reveal a compact active site for controlling sequential sulfur insertion reactions.
Biochem.J., 464, 2014
2XVC
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BU of 2xvc by Molmil
Molecular and structural basis of ESCRT-III recruitment to membranes during archaeal cell division
Descriptor: CADMIUM ION, CDVA, SSO0911, ...
Authors:Samson, R.Y, Obita, T, Hodgson, B, Shaw, M.K, Chong, P.L, Williams, R.L, Bell, S.D.
Deposit date:2010-10-25
Release date:2011-02-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Molecular and Structural Basis of Escrt-III Recruitment to Membranes During Archaeal Cell Division.
Mol.Cell, 41, 2011

226707

数据于2024-10-30公开中

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