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PDB: 46375 results

7YEA
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BU of 7yea by Molmil
Human O-GlcNAc transferase Dimer
Descriptor: UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit
Authors:Gao, H, Lu, P, Liu, Y.
Deposit date:2022-07-05
Release date:2023-07-12
Last modified:2024-01-24
Method:ELECTRON MICROSCOPY (3.82 Å)
Cite:Cryo-EM structure of human O-GlcNAcylation enzyme pair OGT-OGA complex.
Nat Commun, 14, 2023
3P83
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BU of 3p83 by Molmil
Structure of the PCNA:RNase HII complex from Archaeoglobus fulgidus.
Descriptor: DNA polymerase sliding clamp, Ribonuclease HII
Authors:Bubeck, D, Reijns, M.A, Graham, S.C, Astell, K.R, Jones, E.Y, Jackson, A.P.
Deposit date:2010-10-13
Release date:2011-02-02
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:PCNA directs type 2 RNase H activity on DNA replication and repair substrates.
Nucleic Acids Res., 39, 2011
7Y77
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BU of 7y77 by Molmil
Crystal structure of rice NAL1
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Protein NARROW LEAF 1
Authors:Yan, J.J, Guan, Z.Y, Yin, P, Xiong, L.Z.
Deposit date:2022-06-21
Release date:2023-07-12
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Serine protease NAL1 exerts pleiotropic functions through degradation of TOPLESS-related corepressor in rice.
Nat.Plants, 9, 2023
7YIK
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BU of 7yik by Molmil
The structure of archaeal nuclease RecJ2 from Methanocaldococcus jannaschii
Descriptor: nuclease RecJ2
Authors:Wang, W.W, Liu, X.P.
Deposit date:2022-07-16
Release date:2023-07-19
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.191 Å)
Cite:The structure of archaeal nuclease RecJ2 from Methanocaldococcus jannaschii
To Be Published
6SZY
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BU of 6szy by Molmil
Crystal structure of YTHDC1 with fragment 12 (DHU_DC1_150)
Descriptor: 4-propan-2-yl-5,6,7,8-tetrahydro-4~{a}~{H}-quinazolin-2-one, SULFATE ION, YTHDC1
Authors:Bedi, R.K, Huang, D, Sledz, P, Caflisch, A.
Deposit date:2019-10-02
Release date:2020-03-04
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Selectively Disrupting m6A-Dependent Protein-RNA Interactions with Fragments.
Acs Chem.Biol., 15, 2020
7YIL
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BU of 7yil by Molmil
The structure of GINS from Methanocaldococcus jannaschii
Descriptor: GINS
Authors:Wang, W.W, Liu, X.P.
Deposit date:2022-07-16
Release date:2023-07-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:The structure of GINS from Methanocaldococcus jannaschii
To Be Published
6T04
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BU of 6t04 by Molmil
Crystal structure of YTHDC1 with fragment 17 (DHU_DC1_042)
Descriptor: 2-phenyl-4,5-dihydro-1~{H}-imidazole, SULFATE ION, YTH domain-containing protein 1
Authors:Bedi, R.K, Huang, D, Sledz, P, Caflisch, A.
Deposit date:2019-10-02
Release date:2020-03-04
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Selectively Disrupting m6A-Dependent Protein-RNA Interactions with Fragments.
Acs Chem.Biol., 15, 2020
2XTH
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BU of 2xth by Molmil
K2PtBr6 binding to lysozyme
Descriptor: HEXABROMOPLATINATE(IV), LYSOZYME C
Authors:Helliwell, J.R, Bell, A.M.T, Bryant, P, Fisher, S, Habash, J, Helliwell, M, Margiolaki, I, Kaenket, S, Watier, Y, Wright, J, Yalamanchili, S.K.
Deposit date:2010-10-07
Release date:2010-12-08
Last modified:2017-06-28
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Time-Dependent Analysis of K2Ptbr6 Binding to Lysozyme Studied by Protein Powder and Single Crystal X-Ray Analysis
Z.Kristallogr., 225, 2010
6T12
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BU of 6t12 by Molmil
Crystal structure of YTHDC1 with fragment 30 (DHU_DC1_220)
Descriptor: SULFATE ION, YTHDC1, ~{N},2,3-trimethyl-1~{H}-indole-5-carboxamide
Authors:Bedi, R.K, Huang, D, Sledz, P, Caflisch, A.
Deposit date:2019-10-03
Release date:2020-03-04
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Selectively Disrupting m6A-Dependent Protein-RNA Interactions with Fragments.
Acs Chem.Biol., 15, 2020
3PD4
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BU of 3pd4 by Molmil
Crystal structure of the editing domain of threonyl-tRNA synthetase from Pyrococcus abyssi in complex with glycyl-3'-aminoadenosine
Descriptor: 3'-deoxy-3'-(glycylamino)adenosine, Threonyl-tRNA synthetase
Authors:Hussain, T, Kamarthapu, V, Kruparani, S.P, Sankaranarayanan, R.
Deposit date:2010-10-22
Release date:2010-12-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Mechanistic insights into cognate substrate discrimination during proofreading in translation
Proc.Natl.Acad.Sci.USA, 2010
8SZR
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BU of 8szr by Molmil
Dog DHX9 bound to ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, RNA helicase, ...
Authors:Lee, Y.-T, Sickmier, E.A, Grigoriu, S, Boriack-Sjodin, P.A.
Deposit date:2023-05-30
Release date:2023-08-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.97 Å)
Cite:Crystal structures of the DExH-box RNA helicase DHX9.
Acta Crystallogr D Struct Biol, 79, 2023
2XW9
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BU of 2xw9 by Molmil
Crystal Structure of Complement Factor D mutant S183A
Descriptor: COMPLEMENT FACTOR D, GLYCEROL
Authors:Forneris, F, Ricklin, D, Wu, J, Tzekou, A, Wallace, R.S, Lambris, J.D, Gros, P.
Deposit date:2010-11-01
Release date:2011-01-12
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structures of C3B in Complex with Factors B and D Give Insight Into Complement Convertase Formation.
Science, 330, 2010
8IFY
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BU of 8ify by Molmil
Cryo-EM structure of SARS-CoV-2 Omicron BA.4/5 spike protein in complex with white-tailed deer ACE2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme, ...
Authors:Han, P, Meng, Y.M, Qi, J.X.
Deposit date:2023-02-20
Release date:2023-08-30
Last modified:2023-10-25
Method:ELECTRON MICROSCOPY (2.55 Å)
Cite:Structural basis of white-tailed deer, Odocoileus virginianus , ACE2 recognizing all the SARS-CoV-2 variants of concern with high affinity.
J.Virol., 97, 2023
8SHH
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BU of 8shh by Molmil
Crystal structure of EvdS6 decarboxylase in ligand free state
Descriptor: DI(HYDROXYETHYL)ETHER, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, dTDP-glucose 4,6-dehydratase
Authors:Sharma, P, Frigo, L, Dulin, C.C, Bachmann, B.O, Iverson, T.M.
Deposit date:2023-04-14
Release date:2023-08-09
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:EvdS6 is a bifunctional decarboxylase from the everninomicin gene cluster.
J.Biol.Chem., 299, 2023
3PD3
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BU of 3pd3 by Molmil
Crystal structure of the editing domain of threonyl-tRNA synthetase from Pyrococcus abyssi in complex with threonyl-3'-aminoadenosine
Descriptor: 3'-deoxy-3'-(L-threonylamino)adenosine, Threonyl-tRNA synthetase
Authors:Hussain, T, Kamarthapu, V, Kruparani, S.P, Sankaranarayanan, R.
Deposit date:2010-10-22
Release date:2010-12-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Mechanistic insights into cognate substrate discrimination during proofreading in translation
Proc.Natl.Acad.Sci.USA, 2010
6Y71
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BU of 6y71 by Molmil
Pseudomonas stutzeri nitrous oxide reductase mutant, H130A
Descriptor: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, CHLORIDE ION, ...
Authors:Zhang, L, Kroneck, P.M.H, Einsle, O.
Deposit date:2020-02-27
Release date:2021-01-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:A [3Cu:2S] cluster provides insight into the assembly and function of the Cu Z site of nitrous oxide reductase.
Chem Sci, 12, 2021
5LM4
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BU of 5lm4 by Molmil
Structure of the thermostalilized EAAT1 cryst-II mutant in complex with L-ASP and the allosteric inhibitor UCPH101
Descriptor: 2-Amino-5,6,7,8-tetrahydro-4-(4-methoxyphenyl)-7-(naphthalen-1-yl)-5-oxo-4H-chromene-3-carbonitrile, ASPARTIC ACID, Excitatory amino acid transporter 1,Neutral amino acid transporter B(0),Excitatory amino acid transporter 1, ...
Authors:Canul-Tec, J, Assal, R, Legrand, P, Reyes, N.
Deposit date:2016-07-29
Release date:2017-04-19
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structure and allosteric inhibition of excitatory amino acid transporter 1.
Nature, 544, 2017
8T5X
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BU of 8t5x by Molmil
Probing the dissociation pathway of a kinetically labile transthyretin mutant (A25T)
Descriptor: Transthyretin
Authors:Ferguson, J.A, Sun, X, Leach, B.I, Stanfield, R.L, Dyson, H.J, Wright, P.E.
Deposit date:2023-06-14
Release date:2023-08-02
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Probing the Dissociation Pathway of a Kinetically Labile Transthyretin Mutant.
J.Am.Chem.Soc., 146, 2024
2XYW
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BU of 2xyw by Molmil
Novel Sulfonylthiadiazoles with an Unusual Binding Mode as Partial Dual Peroxisome Proliferator-Activated Receptor (PPAR) gamma-delta Agonists with High Potency and In-vivo Efficacy
Descriptor: 3-CHLORO-6-FLUORO-N-[2-[4-[(5-PROPAN-2-YL-1,3,4-THIADIAZOL-2-YL)SULFAMOYL]PHENYL]ETHYL]-1-BENZOTHIOPHENE-2-CARBOXAMIDE, PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR DELTA, octyl beta-D-glucopyranoside
Authors:Marquette, J.-P, Mathieu, M.
Deposit date:2010-11-19
Release date:2011-02-23
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3.14 Å)
Cite:Sulfonylthiadiazoles with an Unusual Binding Mode as Partial Dual Peroxisome Proliferator-Activated Receptor (Ppar) Gamma / Delta Agonists with High Potency and in-Vivo Efficacy
Chemmedchem, 6, 2011
8SK0
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BU of 8sk0 by Molmil
Crystal structure of EvdS6 decarboxylase in ligand bound state
Descriptor: CITRATE ANION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Sharma, P, Frigo, L, Dulin, C.C, Bachmann, B.O, Iverson, T.M.
Deposit date:2023-04-18
Release date:2023-08-09
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:EvdS6 is a bifunctional decarboxylase from the everninomicin gene cluster.
J.Biol.Chem., 299, 2023
7YII
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BU of 7yii by Molmil
Carboxylesterase - RoCE
Descriptor: Non-heme haloperoxidase
Authors:Dou, Z, Jia, P, Ni, Y, Xu, G.C.
Deposit date:2022-07-16
Release date:2023-07-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Carboxylesterase - RoCE
To Be Published
5WLQ
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BU of 5wlq by Molmil
Crystal Structure of Amino Acids 1677-1755 of Human Beta Cardiac Myosin Fused to Gp7 and Eb1
Descriptor: Capsid assembly scaffolding protein,Myosin-7,Microtubule-associated protein RP/EB family member 1, SULFATE ION, trimethylamine oxide
Authors:Andreas, M.P, Ajay, G, Gellings, J, Rayment, I.
Deposit date:2017-07-27
Release date:2017-08-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.104 Å)
Cite:Design considerations in coiled-coil fusion constructs for the structural determination of a problematic region of the human cardiac myosin rod.
J. Struct. Biol., 200, 2017
3PE9
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BU of 3pe9 by Molmil
Structures of Clostridium thermocellum CbhA fibronectin(III)-like modules
Descriptor: Fibronectin(III)-like module, IODIDE ION
Authors:Alahuhta, P.M, Lunin, V.V.
Deposit date:2010-10-25
Release date:2011-11-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Structure and function of the Clostridium thermocellum cellobiohydrolase A X1-module repeat: enhancement through stabilization of the CbhA complex.
Acta Crystallogr.,Sect.D, 68, 2012
5WME
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BU of 5wme by Molmil
Crystal Structure of Amino Acids 1729-1786 of Human Beta Cardiac Myosin Fused to Gp7 as Anti-Parallel Four-Helix Bundle
Descriptor: Capsid assembly scaffolding protein,Myosin-7
Authors:Andreas, M.P, Ajay, G, Gellings, J, Rayment, I.
Deposit date:2017-07-28
Release date:2017-08-23
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Design considerations in coiled-coil fusion constructs for the structural determination of a problematic region of the human cardiac myosin rod.
J. Struct. Biol., 200, 2017
2XQZ
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BU of 2xqz by Molmil
Neutron structure of the perdeuterated Toho-1 R274N R276N double mutant beta-lactamase
Descriptor: BETA-LACTAMSE TOHO-1
Authors:Tomanicek, S.J, Wang, K.K, Weiss, K.L, Blakeley, M.P, Cooper, J, Chen, Y, Coates, L.
Deposit date:2010-09-08
Release date:2010-12-22
Last modified:2024-05-08
Method:NEUTRON DIFFRACTION (2.1 Å)
Cite:The Active Site Protonation States of Perdeuterated Toho-1 Beta-Lactamase Determined by Neutron Diffraction Support a Role for Glu166 as the General Base in Acylation.
FEBS Lett., 585, 2011

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