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PDB: 45955 results

4LR7
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Phosphopentomutase S154A variant
Descriptor: GLYCEROL, MANGANESE (II) ION, Phosphopentomutase
Authors:Birmingham, W.A, Starbird, C.A, Panosian, T.D, Nannemann, D.P, Iverson, T.M, Bachmann, B.O.
Deposit date:2013-07-19
Release date:2013-07-31
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Bioretrosynthetic construction of a didanosine biosynthetic pathway.
Nat.Chem.Biol., 10, 2014
7KSL
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BU of 7ksl by Molmil
Substrate-free human mitochondrial LONP1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Lon protease homolog, mitochondrial
Authors:Shin, M, Watson, E.R, Song, A.S, Mindrebo, J.T, Novick, S.R, Griffin, P, Wiseman, R.L, Lander, G.C.
Deposit date:2020-11-23
Release date:2020-12-09
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structures of the human LONP1 protease reveal regulatory steps involved in protease activation.
Nat Commun, 12, 2021
2IUO
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BU of 2iuo by Molmil
Site Directed Mutagenesis of Key Residues Involved in the Catalytic Mechanism of Cyanase
Descriptor: AZIDE ION, BROMIDE ION, CHLORIDE ION, ...
Authors:Guilloton, M, Walsh, M.A, Joachimiak, A, Anderson, M.P.
Deposit date:2006-06-06
Release date:2006-06-08
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A Twin Set of Low Pka Arginines Ensures the Concerted Acid Base Catalytic Mechanism of Cyanase
To be Published
2ZXZ
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BU of 2zxz by Molmil
Crystal structure of the human RXR alpha ligand binding domain bound to a synthetic agonist compound and a coactivator peptide
Descriptor: 4-[2-(1,1,3,3-tetramethyl-2,3-dihydro-1H-inden-5-yl)-1,3-dioxolan-2-yl]benzoic acid, GRIP1 from Nuclear receptor coactivator 2, Retinoic acid receptor RXR-alpha
Authors:Sato, Y, Antony, P, Rochel, N, Moras, D, Structural Genomics Consortium for Research on Gene Expression (SGCGES)
Deposit date:2009-01-09
Release date:2009-08-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3 Å)
Cite:Silicon analogues of the RXR-selective retinoid agonist SR11237 (BMS649): chemistry and biology
Chemmedchem, 4, 2009
2ZY0
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BU of 2zy0 by Molmil
Crystal structure of the human RXR alpha ligand binding domain bound to a synthetic agonist compound and a coactivator peptide
Descriptor: 4-[2-(1,1,3,3-tetramethyl-2,3-dihydro-1H-1,3-benzodisilol-5-yl)-1,3-dioxolan-2-yl]benzoic acid, GRIP1 from Nuclear receptor coactivator 2, Retinoic acid receptor RXR-alpha
Authors:Sato, Y, Antony, P, Rochel, N, Moras, D, Structural Genomics Consortium for Research on Gene Expression (SGCGES)
Deposit date:2009-01-09
Release date:2009-08-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Silicon analogues of the RXR-selective retinoid agonist SR11237 (BMS649): chemistry and biology
Chemmedchem, 4, 2009
7AQF
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Crystal Structure of Small Molecule Inhibitor TM5484 Bound to Stabilized Active Plasminogen Activator Inhibitor-1 (PAI-1-stab)
Descriptor: 5-Chloro-2-[[2-[3-(furan-3-yl)anilino]-2-oxoacetyl]amino]benzoic acid, Plasminogen activator inhibitor 1
Authors:Sillen, M, Strelkov, S.V, Declerck, P.J.
Deposit date:2020-10-21
Release date:2021-02-17
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Structural Insight into the Two-Step Mechanism of PAI-1 Inhibition by Small Molecule TM5484.
Int J Mol Sci, 22, 2021
2ZZC
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BU of 2zzc by Molmil
Crystal structure of NADP(H):human thioredoxin reductase I
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Thioredoxin reductase 1, ...
Authors:Lo, Y.C, Ko, T.P, Wang, A.H.J.
Deposit date:2009-02-09
Release date:2009-08-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Terpyridine-platinum(II) complexes are effective inhibitors of mammalian topoisomerases and human thioredoxin reductase 1.
J.Inorg.Biochem., 103, 2009
4MH3
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BU of 4mh3 by Molmil
Crystal structure of Bovine Mitochondrial Peroxiredoxin III
Descriptor: CITRIC ACID, PHOSPHATE ION, Thioredoxin-dependent peroxide reductase, ...
Authors:Cao, Z, McGow, D.P, Shepherd, C, Lindsay, J.G.
Deposit date:2013-08-29
Release date:2015-03-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Improved Catenated Structures of Bovine Peroxiredoxin III F190L Reveal Details of Ring-Ring Interactions and a Novel Conformational State.
Plos One, 10, 2015
4DC4
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BU of 4dc4 by Molmil
Lysozyme Trimer
Descriptor: CHLORIDE ION, GLYCEROL, Lysozyme C, ...
Authors:Sharma, P, Ashish
Deposit date:2012-01-17
Release date:2013-01-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.654 Å)
Cite:Characterization of heat induced spherulites of lysozyme reveals new insight on amyloid initiation
Sci Rep, 6, 2016
1SHW
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BU of 1shw by Molmil
EphB2 / EphrinA5 Complex Structure
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Ephrin type-B receptor 2, Ephrin-A5, ...
Authors:Himanen, J.P, Chumley, M.J, Lackmann, M, Li, C, Barton, W.A, Jeffrey, P.D, Vearing, C, Geleick, D, Feldheim, D.A, Boyd, A.W.
Deposit date:2004-02-26
Release date:2004-05-18
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Repelling class discrimination: ephrin-A5 binds to and activates EphB2 receptor signaling
Nat.Neurosci., 7, 2004
1N1C
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BU of 1n1c by Molmil
Crystal Structure Of The Dimeric TorD Chaperone From Shewanella Massilia
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, TorA specific chaperone
Authors:Tranier, S, Iobbi-Nivol, C, Mortier-Barriere, I, Birck, C, Mejean, V, Samama, J.-P.
Deposit date:2002-10-17
Release date:2003-05-13
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:A Novel Protein Fold and Extreme Domain Swapping in the Dimeric TorD Chaperone from Shewanella massilia
Structure, 11, 2003
5N9Q
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Structure of A. thaliana RCD1(468-567)
Descriptor: Inactive poly [ADP-ribose] polymerase RCD1
Authors:Tossavainen, H, Hellman, M, Vainonen, J, Kangasjarvi, J, Permi, P.
Deposit date:2017-02-27
Release date:2018-03-14
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Arabidopsis RCD1 coordinates chloroplast and mitochondrial functions through interaction with ANAC transcription factors.
Elife, 8, 2019
7VS0
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BU of 7vs0 by Molmil
crystal structure of BRD2-BD2 in complex with purine derivative
Descriptor: Bromodomain-containing protein 2, Doxofylline, GLYCEROL
Authors:Padmanabhan, B, Arole, A, Deshmukh, P, Ashok, S, Mathur, S.
Deposit date:2021-10-25
Release date:2023-02-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Structural and biochemical insights into purine-based drug molecules in hBRD2 delineate a unique binding mode opening new vistas in the design of inhibitors of the BET family.
Acta Crystallogr D Struct Biol, 79, 2023
1JK4
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BU of 1jk4 by Molmil
DES 1-6 BOVINE NEUROPHYSIN II COMPLEX WITH VASOPRESSIN
Descriptor: CADMIUM ION, Lys Vasopressin, NEUROPHYSIN 2
Authors:Rose, J.P, Wang, B.-C.
Deposit date:2001-07-11
Release date:2003-02-04
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of an Unliganded Neurophysin and its Vasopressin Complex: Implications for Binding and Allosteric Mechanisms
Protein Sci., 10, 2001
1SQF
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BU of 1sqf by Molmil
The crystal structure of E. coli Fmu binary complex with S-Adenosylmethionine at 2.1 A resolution
Descriptor: S-ADENOSYLMETHIONINE, SUN protein
Authors:Foster, P.G, Nunes, C.R, Greene, P, Moustakas, D, Stroud, R.M.
Deposit date:2004-03-18
Release date:2004-05-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The First Structure of an RNA m5C Methyltransferase, Fmu, Provides Insight into Catalytic Mechanism and Specific Binding of RNA Substrate
Structure, 11, 2003
5O82
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Crystal Structure of R67A/E173A Mutant of alpha-L-arabinofuranosidase Ara51 from Clostridium thermocellum in complex with arabinofuranose
Descriptor: Intracellular exo-alpha-(1->5)-L-arabinofuranosidase, alpha-L-arabinofuranose
Authors:Lafite, P, Daniellou, R.
Deposit date:2017-06-12
Release date:2018-06-27
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.393 Å)
Cite:To be announced
To Be Published
7VA1
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BU of 7va1 by Molmil
Crystal structure of human 3-phosphoglycerate dehydrogenase in complex with GDD-04-35
Descriptor: 4-[(3-ethanoylphenyl)sulfamoyl]-~{N}-[4-(3-fluorophenyl)-1,3-thiazol-2-yl]benzamide, D-3-phosphoglycerate dehydrogenase
Authors:Cen, Y, Gao, D, Zhou, J, Tian, P.
Deposit date:2021-08-27
Release date:2023-03-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Crystal structure of human 3-phosphoglycerate dehydrogenase in complex with GDD-04-35
To Be Published
2ITK
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BU of 2itk by Molmil
human Pin1 bound to D-PEPTIDE
Descriptor: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, D-Peptide, Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1
Authors:Noel, J.P, Zhang, Y.
Deposit date:2006-10-19
Release date:2007-05-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structural basis for high-affinity peptide inhibition of human Pin1.
Acs Chem.Biol., 2, 2007
3AEZ
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BU of 3aez by Molmil
Pantothenate kinase from Mycobacterium tuberculosis (MtPanK) in complex with GDP and Phosphopantothenate
Descriptor: GLYCEROL, GUANOSINE-5'-DIPHOSPHATE, N-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanine, ...
Authors:Chetnani, B, Kumar, P, Surolia, A, Vijayan, M.
Deposit date:2010-02-18
Release date:2010-05-26
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:M. tuberculosis pantothenate kinase: dual substrate specificity and unusual changes in ligand locations
J.Mol.Biol., 400, 2010
5OD9
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BU of 5od9 by Molmil
Structure of the engineered metalloesterase MID1sc9
Descriptor: (2~{S})-2-phenylpropanoic acid, 1,2-ETHANEDIOL, CHLORIDE ION, ...
Authors:Studer, S, Mittl, P.R.E, Hilvert, D.
Deposit date:2017-07-05
Release date:2018-12-12
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.13 Å)
Cite:Evolution of a highly active and enantiospecific metalloenzyme from short peptides.
Science, 362, 2018
2BYZ
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BU of 2byz by Molmil
Structure of E.coli KAS I H298Q mutant in complex with C12 fatty acid
Descriptor: 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE I, AMMONIUM ION, LAURIC ACID
Authors:Olsen, J.G, von Wettstein-Knowles, P, Henriksen, A.
Deposit date:2005-08-09
Release date:2006-02-01
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Fatty acid synthesis. Role of active site histidines and lysine in Cys-His-His-type beta-ketoacyl-acyl carrier protein synthases.
FEBS J., 273, 2006
7B7F
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BU of 7b7f by Molmil
Room temperature X-ray structure of H/D-exchanged PLL lectin in complex with L-fucose
Descriptor: PLL lectin, alpha-L-fucopyranose, beta-L-fucopyranose
Authors:Gajdos, L, Blakeley, M.P, Kumar, A, Wimmerova, M, Haertlein, M, Forsyth, V.T, Imberty, A, Devos, J.M.
Deposit date:2020-12-10
Release date:2021-03-17
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Visualization of hydrogen atoms in a perdeuterated lectin-fucose complex reveals key details of protein-carbohydrate interactions.
Structure, 29, 2021
7B7E
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BU of 7b7e by Molmil
Room temperature X-ray structure of perdeuterated PLL lectin
Descriptor: PLL lectin
Authors:Gajdos, L, Blakeley, M.P, Kumar, A, Wimmerova, M, Haertlein, M, Forsyth, V.T, Imberty, A, Devos, J.M.
Deposit date:2020-12-10
Release date:2021-03-17
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Visualization of hydrogen atoms in a perdeuterated lectin-fucose complex reveals key details of protein-carbohydrate interactions.
Structure, 29, 2021
3I7N
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BU of 3i7n by Molmil
Crystal Structure of DDB1 in Complex with the H-Box Motif of WDTC1
Descriptor: DNA damage-binding protein 1, WD and tetratricopeptide repeats protein 1
Authors:Li, T, Robert, E.I, Breugel, P.C.V, Strubin, M, Zheng, N.
Deposit date:2009-07-08
Release date:2009-12-08
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:A promiscuous alpha-helical motif anchors viral hijackers and substrate receptors to the CUL4-DDB1 ubiquitin ligase machinery.
Nat.Struct.Mol.Biol., 17, 2010
5IK4
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BU of 5ik4 by Molmil
Laminin A2LG45 C-form, Apo.
Descriptor: 2-acetamido-2-deoxy-alpha-D-galactopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Briggs, D.C, Hohenester, E, Campbell, K.P.
Deposit date:2016-03-03
Release date:2016-08-10
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.27 Å)
Cite:Structural basis of laminin binding to the LARGE glycans on dystroglycan.
Nat.Chem.Biol., 12, 2016

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