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PDB: 45955 results

4LOS
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BU of 4los by Molmil
C1s CUB2-CCP1
Descriptor: CALCIUM ION, Complement C1s subcomponent heavy chain
Authors:Wallis, R, Venkatraman Girija, U, Moody, P.C.E, Marshall, J.E, Gingras, A.R.
Deposit date:2013-07-13
Release date:2013-08-07
Last modified:2013-09-04
Method:X-RAY DIFFRACTION (1.996 Å)
Cite:Structural basis of the C1q/C1s interaction and its central role in assembly of the C1 complex of complement activation.
Proc.Natl.Acad.Sci.USA, 110, 2013
3QV7
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BU of 3qv7 by Molmil
Crystal structure of Leishmania mexicana pyruvate kinase(LmPYK)in complex with ponceau S and acid blue 25.
Descriptor: 3-hydroxy-4-[(E)-{2-sulfo-4-[(E)-(4-sulfophenyl)diazenyl]phenyl}diazenyl]naphthalene-2,7-disulfonic acid, 9,10-dioxo-4-(phenylamino)-9,10-dihydroanthracene-2-sulfonic acid, POTASSIUM ION, ...
Authors:Morgan, H.P, Auld, D.S, McNae, I.W, Nowicki, M.W, Michels, P.A.M, Fothergill-Gilmore, L.A, Walkinshaw, M.D.
Deposit date:2011-02-25
Release date:2011-06-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The trypanocidal drug suramin and other trypan blue mimetics are inhibitors of pyruvate kinases and bind to the adenosine site.
J.Biol.Chem., 286, 2011
5ZRO
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BU of 5zro by Molmil
M. smegmatis antimutator protein MutT2 in complex with 5mdCTP
Descriptor: 1,2-ETHANEDIOL, 2'-DEOXY-5-METHYLCYTIDINE 5'-(TETRAHYDROGEN TRIPHOSPHATE), Putative mutator protein MutT2/NUDIX hydrolase
Authors:Singh, A, Arif, S.M, Sang, P.B, Varshney, U, Vijayan, M.
Deposit date:2018-04-24
Release date:2019-04-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:Structural insights into the specificity and catalytic mechanism of mycobacterial nucleotide pool sanitizing enzyme MutT2.
J.Struct.Biol., 204, 2018
5ZVA
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BU of 5zva by Molmil
APOBEC3F Chimeric Catalytic Domain in Complex with DNA(dC9)
Descriptor: APEBEC3F/ssDNA-C9, CACODYLATE ION, DNA (5'-D(*AP*TP*TP*TP*TP*CP*AP*AP*CP*T)-3'), ...
Authors:Cheng, C, Zhang, T.L, Wang, C.X, Lan, W.X, Ding, J.P, Cao, C.Y.
Deposit date:2018-05-09
Release date:2018-11-21
Last modified:2018-11-28
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure of Cytidine Deaminase Human APOBEC3F Chimeric Catalytic Domain in Complex with DNA
Chin.J.Chem., 36, 2018
4LQD
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BU of 4lqd by Molmil
The crystal structures of the Brucella protein TcpB and the TLR adaptor protein TIRAP show structural differences in microbial TIR mimicry
Descriptor: GLYCEROL, Toll/interleukin-1 receptor domain-containing adapter protein
Authors:Snyder, G.A, Smith, P, Jiang, J, Xiao, T.S.
Deposit date:2013-07-17
Release date:2013-12-04
Last modified:2014-04-09
Method:X-RAY DIFFRACTION (2.451 Å)
Cite:Crystal structures of the Toll/Interleukin-1 receptor (TIR) domains from the Brucella protein TcpB and host adaptor TIRAP reveal mechanisms of molecular mimicry.
J.Biol.Chem., 289, 2014
8SF6
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BU of 8sf6 by Molmil
Promiscuous amino acid gamma synthase from Caldicellulosiruptor hydrothermalis in closed conformation
Descriptor: 2-(2-ETHOXYETHOXY)ETHANOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-{2-[2-2-(METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, ...
Authors:Buller, A.R, Zmich, A.P, Bingman, C.A.
Deposit date:2023-04-10
Release date:2023-12-27
Method:X-RAY DIFFRACTION (1.702 Å)
Cite:Multiplexed Assessment of Promiscuous Non-Canonical Amino Acid Synthase Activity in a Pyridoxal Phosphate-Dependent Protein Family.
Acs Catalysis, 13, 2023
6M5U
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BU of 6m5u by Molmil
The coordinates of the monomeric terminase complex in the presence of the ADP-BeF3
Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, ...
Authors:Yang, Y.X, Yang, P, Wang, N, Zhu, L, Zhou, Z.H, Rao, Z.H, Wang, X.X.
Deposit date:2020-03-11
Release date:2020-10-28
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Architecture of the herpesvirus genome-packaging complex and implications for DNA translocation.
Protein Cell, 11, 2020
2ZBJ
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BU of 2zbj by Molmil
Crystal structure of Dioclea rostrata lectin
Descriptor: CALCIUM ION, Lectin alpha chain, MANGANESE (II) ION, ...
Authors:de Oliveira, T.M, Delatorre, P, da Rocha, B.A.M, de Sousa, E.P, Nascimento, K.S, Bezerra, G.A, Moura, T.R, Benevides, R.G, Bezerra, E.H.S, Moreno, F.B.M.B, Freire, V.N, de Azevedo Jr, W.F, Cavada, B.S.
Deposit date:2007-10-22
Release date:2008-08-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structure of Dioclea rostrata lectin: Insights into understanding the pH-dependent dimer-tetramer equilibrium and the structural basis for carbohydrate recognition in Diocleinae lectins
J.Struct.Biol., 164, 2008
4LTG
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BU of 4ltg by Molmil
Dehydration/Rehydration of a Nucleic Acid system containing a Polypyridyl Ruthenium Complex at 74% relative humidity (2/7)
Descriptor: BARIUM ION, CHLORIDE ION, DNA, ...
Authors:Hall, J.P, Sanchez-Weatherby, J, Cardin, C.J.
Deposit date:2013-07-23
Release date:2014-09-24
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.18 Å)
Cite:Controlled Dehydration of a Ruthenium Complex-DNA Crystal Induces Reversible DNA Kinking.
J.Am.Chem.Soc., 136, 2014
7VT7
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BU of 7vt7 by Molmil
Crystal structure of CBM deleted MtGlu5 in complex with CBI
Descriptor: Endoglucanase H, GLYCEROL, TRYPTOPHAN, ...
Authors:Ye, T.J, Ko, P.T, Huang, K.F, Wu, S.H.
Deposit date:2021-10-28
Release date:2022-09-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Synergic action of an inserted carbohydrate-binding module in a glycoside hydrolase family 5 endoglucanase.
Acta Crystallogr D Struct Biol, 78, 2022
3NFI
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BU of 3nfi by Molmil
Crystal structure of tandem winged helix domain of RNA polymerase I subunit A49
Descriptor: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, DNA-directed RNA polymerase I subunit RPA49
Authors:Geiger, S.R, Lorenzen, K, Schreieck, A, Hanecker, P, Kostrewa, D, Heck, A.J.R, Cramer, P.
Deposit date:2010-06-10
Release date:2010-09-08
Last modified:2015-03-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:RNA Polymerase I Contains a TFIIF-Related DNA-Binding Subcomplex.
Mol.Cell, 39, 2010
6MB4
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BU of 6mb4 by Molmil
Binary (sisomicin) structure of AAC-IIIb
Descriptor: (1S,2S,3R,4S,6R)-4,6-diamino-3-{[(2S,3R)-3-amino-6-(aminomethyl)-3,4-dihydro-2H-pyran-2-yl]oxy}-2-hydroxycyclohexyl 3-deoxy-4-C-methyl-3-(methylamino)-beta-L-arabinopyranoside, Aac(3)-IIIb protein
Authors:Cuneo, M.J, Kumar, P.
Deposit date:2018-08-29
Release date:2018-11-07
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.302 Å)
Cite:Encoding of Promiscuity in an Aminoglycoside Acetyltransferase.
J. Med. Chem., 61, 2018
5EB6
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BU of 5eb6 by Molmil
Crystal Structure of the Reversibly photoswitching chromoprotein Dathail, Ground State
Descriptor: Reversible photoswitching chromoprotein Dathail
Authors:Close, D.W, Langan, P.S, Bradbury, A.R.M.
Deposit date:2015-10-18
Release date:2016-04-06
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.65008247 Å)
Cite:Evolution and characterization of a new reversibly photoswitching chromogenic protein, Dathail.
J.Mol.Biol., 428, 2016
2IVO
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BU of 2ivo by Molmil
Structure of UP1 protein
Descriptor: TUNGSTATE(VI)ION, UP1
Authors:Hecker, A, Leulliot, N, Graille, M, Dorlet, P, Quevillon-Cheruel, S, Ulryck, N, Van Tilbeurgh, H, Forterre, P.
Deposit date:2006-06-14
Release date:2007-07-31
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:An Archaeal Orthologue of the Universal Protein Kae1 is an Iron Metalloprotein which Exhibits Atypical DNA-Binding Properties and Apurinic-Endonuclease Activity in Vitro.
Nucleic Acids Res., 35, 2007
8CEX
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BU of 8cex by Molmil
Structure of the mouse 8-oxoguanine DNA Glycosylase mOGG1 in complex with ligand TH11227
Descriptor: 6-fluoranyl-N-[(4-methylphenyl)methyl]pyridine-3-carboxamide, N-glycosylase/DNA lyase, NICKEL (II) ION
Authors:Kosenina, S, Scaletti, E.R, Stenmark, P.
Deposit date:2023-02-02
Release date:2024-02-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of the mouse 8-oxoguanine DNA Glycosylase mOGG1 in complex with ligand TH11227
To Be Published
3NG1
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BU of 3ng1 by Molmil
N AND GTPASE DOMAINS OF THE SIGNAL SEQUENCE RECOGNITION PROTEIN FFH FROM THERMUS AQUATICUS
Descriptor: 1,2-ETHANEDIOL, CADMIUM ION, SIGNAL SEQUENCE RECOGNITION PROTEIN FFH, ...
Authors:Freymann, D.M, Stroud, R.M, Walter, P.
Deposit date:1998-09-13
Release date:1999-07-30
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Functional changes in the structure of the SRP GTPase on binding GDP and Mg2+GDP.
Nat.Struct.Biol., 6, 1999
3HII
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BU of 3hii by Molmil
Crystal structure of human diamine oxidase in complex with the inhibitor pentamidine
Descriptor: 1,5-BIS(4-AMIDINOPHENOXY)PENTANE, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Amiloride-sensitive amine oxidase, ...
Authors:McGrath, A.P, Guss, J.M.
Deposit date:2009-05-20
Release date:2009-10-20
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.149 Å)
Cite:Structure and inhibition of human diamine oxidase
Biochemistry, 48, 2009
6MB6
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BU of 6mb6 by Molmil
AAC-IIIb binary with CoASH
Descriptor: Aac(3)-IIIb protein, COENZYME A, MALONATE ION
Authors:Cuneo, M.J, Kumar, P.
Deposit date:2018-08-29
Release date:2018-11-07
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Encoding of Promiscuity in an Aminoglycoside Acetyltransferase.
J. Med. Chem., 61, 2018
6EIC
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BU of 6eic by Molmil
Crystal structure of Rv0183, a Monoglyceride Lipase from Mycobacterium Tuberculosis
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Mycobacterium Tuberculosis Monoglyceride Lipase, NITRATE ION, ...
Authors:Aschauer, P, Pavkov-Keller, T, Oberer, M.
Deposit date:2017-09-19
Release date:2018-06-27
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The crystal structure of monoacylglycerol lipase from M. tuberculosis reveals the basis for specific inhibition.
Sci Rep, 8, 2018
5DT3
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BU of 5dt3 by Molmil
Aurora A Kinase in Complex with ATP in Space Group P6122
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Aurora kinase A, MAGNESIUM ION, ...
Authors:Janecek, M, Rossmann, M, Sharma, P, Emery, A, McKenzie, G.J, Huggins, D.J, Stockwell, S, Stokes, J.A, Almeida, E.G, Hardwick, B, Narvaez, A.J, Hyvonen, M, Spring, D.R, Venkitaraman, A.R.
Deposit date:2015-09-17
Release date:2016-07-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Allosteric modulation of AURKA kinase activity by a small-molecule inhibitor of its protein-protein interaction with TPX2.
Sci Rep, 6, 2016
4PNR
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BU of 4pnr by Molmil
Crystal Structure of human Tankyrase 2 in complex with TIQ-A.
Descriptor: 4H-thieno[2,3-c]isoquinolin-5-one, ETHANOL, GLYCEROL, ...
Authors:Qiu, W, Lam, R, Romanov, V, Gordon, R, Gebremeskel, S, Vodsedalek, J, Thompson, C, Beletskaya, I, Battaile, K.P, Pai, E.F, Chirgadze, N.Y.
Deposit date:2014-05-24
Release date:2014-10-15
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Insights into the binding of PARP inhibitors to the catalytic domain of human tankyrase-2.
Acta Crystallogr.,Sect.D, 70, 2014
4HI9
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BU of 4hi9 by Molmil
1.2 structure of integrin-linked kinase ankyrin repeat domain in complex with PINCH1 LIM1 domain collected at wavelength 0.91974
Descriptor: IODIDE ION, Integrin-linked protein kinase, LIM and senescent cell antigen-like-containing domain protein 1, ...
Authors:Stiegler, A.L, Jakoncic, J, Stojanoff, V, Chiswell, B.P, Calderwood, D.A, Boggon, T.J.
Deposit date:2012-10-11
Release date:2013-12-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.203 Å)
Cite:1.2 structure of integrin-linked kinase ankyrin repeat domain in complex with PINCH1 LIM1 domain collected at wavelength 0.91974
To be Published
6UGH
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BU of 6ugh by Molmil
Cryo-EM structure of the apo form of human PRMT5:MEP50 complex at a resolution of 3.4 angstrom
Descriptor: Methylosome protein 50, Protein arginine N-methyltransferase 5
Authors:Zhou, W, Yadav, G.P, Jiang, Q.-X, Li, C.
Deposit date:2019-09-26
Release date:2020-12-09
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:A 3.4-angstrom cryo-EM structure of the apo form of hu-man PRMT5:MEP50 complex reveals sequential catalysis of symmetric methyl transfer
To Be Published
8CEY
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BU of 8cey by Molmil
Structure of the mouse 8-oxoguanine DNA Glycosylase mOGG1 in complex with ligand TH11233
Descriptor: N-glycosylase/DNA lyase, NICKEL (II) ION, ~{N}-(3,3-dimethylcyclobutyl)imidazo[5,1-b][1,3]thiazole-3-carboxamide
Authors:Kosenina, S, Scaletti, E.R, Stenmark, P.
Deposit date:2023-02-02
Release date:2024-02-21
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure of the mouse 8-oxoguanine DNA Glycosylase mOGG1 in complex with ligand TH11233
To Be Published
3HRZ
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BU of 3hrz by Molmil
Cobra Venom Factor (CVF) in complex with human factor B
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Cobra venom factor, ...
Authors:Janssen, B.J.C, Gomes, L, Koning, R.I, Svergun, D.I, Koster, A.J, Fritzinger, D.C, Vogel, C.-W, Gros, P.
Deposit date:2009-06-10
Release date:2009-07-07
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Insights into complement convertase formation based on the structure of the factor B-cobra venom factor complex
Embo J., 28, 2009

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